| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715362
Identifier: 119715362
GI number: 119715362
Start: 1190729
End: 1191379
Strand: Direct
Name: 119715362
Synonym: Noca_1124
Alternate gene names: NA
Gene position: 1190729-1191379 (Clockwise)
Preceding gene: 119715361
Following gene: 119715363
Centisome position: 23.88
GC content: 72.04
Gene sequence:
>651_bases ATGAGGTGGCTGCGCCGCCCGCGGGCCGACAGCGGGGTCACGCTCATCGAGGTGCTGGTCAGCATGGGCCTGTTCGCCCT GATCGGCTCGCTGCTCCTGGGCCTGGCGCTGTCGACCGACTCGGTCACCGCGAGCACCCGCACCCGAGCCGGCGTCACCG AGGAGACCCGGACCGCCATGGAGCGGCTGACCCGCGAGCTGCGGCAGTCGGCCGGGATCGAGGCCGTCACCCTCCCGGGG CCGACCTCCTCGATGGCGCTGACGTTCTGGACCGACTTCGACGGCGACGGCGTCCGCGACACCGCGGCCGCCGACCCCGA GGTGCTGACCTACTGCTGGTCACCGGCCACGCTCCAGCTCACCCTGGGCGCCACGACCGACTGCGACACCGCCCGGCCGG TGCTCGCGGCGACGGTCGCCTCGGTGGAGCTGGAGCTGGACAGCAGCGAGTGGGCGTACGACGCGAACGGCGACGGCACC ACCACCTGGCTCGAGCTCGACCAGAAGGGCGCGCCGGTCGGCAACCAGAACAACCAGCCCGACGGGACCGAGCTGCTCCA CATCGACCTGGTCGGCGTGACCATCACGGTCCGCGACGGCAGCGGCGAGCAGACCTACCACACCCAGATCGACCTCCGGA ACAGGAGCTGA
Upstream 100 bases:
>100_bases CCAGCCAGCCGATGCGGGTGCTGCCCGACAGCACCGTCGACCCGGCCTCGGCCGTCTCGCTCACCCTCGGCCAGGTCGGC TGCTCGGCCCTGGACGCGCG
Downstream 100 bases:
>100_bases CGGTGACGCGCACCCCCCCGACGACGTCCCGACCCGGGACCCGGCGCCGCGACGACCGCGGCTCGGCGATGATCCTGACG ATGATGGCGCTCGTGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRWLRRPRADSGVTLIEVLVSMGLFALIGSLLLGLALSTDSVTASTRTRAGVTEETRTAMERLTRELRQSAGIEAVTLPG PTSSMALTFWTDFDGDGVRDTAAADPEVLTYCWSPATLQLTLGATTDCDTARPVLAATVASVELELDSSEWAYDANGDGT TTWLELDQKGAPVGNQNNQPDGTELLHIDLVGVTITVRDGSGEQTYHTQIDLRNRS
Sequences:
>Translated_216_residues MRWLRRPRADSGVTLIEVLVSMGLFALIGSLLLGLALSTDSVTASTRTRAGVTEETRTAMERLTRELRQSAGIEAVTLPG PTSSMALTFWTDFDGDGVRDTAAADPEVLTYCWSPATLQLTLGATTDCDTARPVLAATVASVELELDSSEWAYDANGDGT TTWLELDQKGAPVGNQNNQPDGTELLHIDLVGVTITVRDGSGEQTYHTQIDLRNRS >Mature_216_residues MRWLRRPRADSGVTLIEVLVSMGLFALIGSLLLGLALSTDSVTASTRTRAGVTEETRTAMERLTRELRQSAGIEAVTLPG PTSSMALTFWTDFDGDGVRDTAAADPEVLTYCWSPATLQLTLGATTDCDTARPVLAATVASVELELDSSEWAYDANGDGT TTWLELDQKGAPVGNQNNQPDGTELLHIDLVGVTITVRDGSGEQTYHTQIDLRNRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23215; Mature: 23215
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLRRPRADSGVTLIEVLVSMGLFALIGSLLLGLALSTDSVTASTRTRAGVTEETRTAM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH ERLTRELRQSAGIEAVTLPGPTSSMALTFWTDFDGDGVRDTAAADPEVLTYCWSPATLQL HHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEE TLGATTDCDTARPVLAATVASVELELDSSEWAYDANGDGTTTWLELDQKGAPVGNQNNQP EECCCCCCCCCCHHHHEEEEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCC DGTELLHIDLVGVTITVRDGSGEQTYHTQIDLRNRS CCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCC >Mature Secondary Structure MRWLRRPRADSGVTLIEVLVSMGLFALIGSLLLGLALSTDSVTASTRTRAGVTEETRTAM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH ERLTRELRQSAGIEAVTLPGPTSSMALTFWTDFDGDGVRDTAAADPEVLTYCWSPATLQL HHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEE TLGATTDCDTARPVLAATVASVELELDSSEWAYDANGDGTTTWLELDQKGAPVGNQNNQP EECCCCCCCCCCHHHHEEEEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCC DGTELLHIDLVGVTITVRDGSGEQTYHTQIDLRNRS CCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA