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The map label for this gene is hsdS [H]

Identifier: 119715344

GI number: 119715344

Start: 1168614

End: 1169099

Strand: Direct

Name: hsdS [H]

Synonym: Noca_1106

Alternate gene names: 119715344

Gene position: 1168614-1169099 (Clockwise)

Preceding gene: 119715343

Following gene: 119715345

Centisome position: 23.44

GC content: 61.73

Gene sequence:

>486_bases
ATGACAGCGACGTCTGCAGCTCTCGGCGACGTGCCCGTGGTCGCGAATGCTCCTGAGCCTGCGTACTTCCACAACGTGAG
CAACCGCGACGGTGAAACAGTGGTGGTCGCCCGCTCTGGGGCATACGCCGGCTTTGTCAGCTATTGGCGGGGACCGATCT
TCTTGACCGACGCGTTCAGTGTCCATCCACACGATGGGGTCTTGATGCCGCGATTCGTCTTCCACCTTCTCCGGGCCAGA
CAGGCTCAGTTGCACGCGTTCAAGGCAGGAGCCGGTGTGCCCCACGTAAGGGTCAAGGACGTCGAATCGTACGAGGTGCC
AGTGCCCCCGCTGGATGTGCAGGCGCGGGTAGTGGAGATTCTCGACAAGTTCGATGCCTTAGTGAATGACGTGTCGGTCG
GTCTTCCTGCTGAGATCGCGGCGCGGCGCAAGCAGTACGAGTACTACCGCCACAAGCTCTTGACCTTCCCGGAGCGAGCC
GCGTGA

Upstream 100 bases:

>100_bases
CGTTCGACGCGCCTGACTCTCTCTCTCTCTCTCTCTCTCGCAGAGCAGGCTCAGATGGGCGAGACTGAGTGATGTTGCGA
CACTTCGGCGCGGCTCAGCC

Downstream 100 bases:

>100_bases
ACCTCGACGAGCTCGGCGTTCCCGGCAGCGCACCGCACTTTGAGCCGATCTCGGTCAGTGACGAGAGCACGGTCGTTGCT
GAGTTCGTCCCTGACCCGAG

Product: restriction modification system DNA specificity subunit

Products: NA

Alternate protein names: S.EcoR124II; Type I restriction enzyme EcoR124II specificity protein; S protein [H]

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTATSAALGDVPVVANAPEPAYFHNVSNRDGETVVVARSGAYAGFVSYWRGPIFLTDAFSVHPHDGVLMPRFVFHLLRAR
QAQLHAFKAGAGVPHVRVKDVESYEVPVPPLDVQARVVEILDKFDALVNDVSVGLPAEIAARRKQYEYYRHKLLTFPERA
A

Sequences:

>Translated_161_residues
MTATSAALGDVPVVANAPEPAYFHNVSNRDGETVVVARSGAYAGFVSYWRGPIFLTDAFSVHPHDGVLMPRFVFHLLRAR
QAQLHAFKAGAGVPHVRVKDVESYEVPVPPLDVQARVVEILDKFDALVNDVSVGLPAEIAARRKQYEYYRHKLLTFPERA
A
>Mature_160_residues
TATSAALGDVPVVANAPEPAYFHNVSNRDGETVVVARSGAYAGFVSYWRGPIFLTDAFSVHPHDGVLMPRFVFHLLRARQ
AQLHAFKAGAGVPHVRVKDVESYEVPVPPLDVQARVVEILDKFDALVNDVSVGLPAEIAARRKQYEYYRHKLLTFPERAA

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 17781; Mature: 17650

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATSAALGDVPVVANAPEPAYFHNVSNRDGETVVVARSGAYAGFVSYWRGPIFLTDAFS
CCCCCCCCCCCCEEECCCCCCEECCCCCCCCCEEEEECCCCCHHHHHHCCCCEEEEECEE
VHPHDGVLMPRFVFHLLRARQAQLHAFKAGAGVPHVRVKDVESYEVPVPPLDVQARVVEI
ECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
LDKFDALVNDVSVGLPAEIAARRKQYEYYRHKLLTFPERAA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TATSAALGDVPVVANAPEPAYFHNVSNRDGETVVVARSGAYAGFVSYWRGPIFLTDAFS
CCCCCCCCCCCEEECCCCCCEECCCCCCCCCEEEEECCCCCHHHHHHCCCCEEEEECEE
VHPHDGVLMPRFVFHLLRARQAQLHAFKAGAGVPHVRVKDVESYEVPVPPLDVQARVVEI
ECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
LDKFDALVNDVSVGLPAEIAARRKQYEYYRHKLLTFPERAA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2784505 [H]