Click here to switch to the map view.

The map label for this gene is 119715236

Identifier: 119715236

GI number: 119715236

Start: 1042493

End: 1042915

Strand: Reverse

Name: 119715236

Synonym: Noca_0993

Alternate gene names: NA

Gene position: 1042915-1042493 (Counterclockwise)

Preceding gene: 119715238

Following gene: 119715234

Centisome position: 20.92

GC content: 71.39

Gene sequence:

>423_bases
ATGACGACACGACCCGAGTCCGAGGGCCGGTTGGCCACCCTCCTCTCCTACGACTGCTGGAACCTCCTGGAGTCGGTTCA
CATCGCACGCGTCGCGTGGATCGGCCCGGAGGGCGTGGCCGTCGTACCGGTCAACTACACCGTCGTCGCCGGCGCCGTGT
GGTTCCGCACCACCCCCGACTCCACGCTCGCCCGCGAGTGCCACGGGCAGCGGGTCGTGGTCGAGGTCGACGAGATCGAC
CCCACCACCCGGGCCGGGTGGAGCGTCGTGGTCGTCGGCACCGCCGAGCTCGTCGACGCCCACGACGTCCCGGACATGCT
GATCGGCCTGGAGGTGTGGCCGAGCGGGACCCGCACGCTGTTCGTCCGCGTCGACGTCCACGAGGTCAGTGGCCGGCGCC
TCTACGGCGCCCACGGCACCTGA

Upstream 100 bases:

>100_bases
GGCCTGGGAGGTGTCCGCCCACACACGGCAGGTTTGGGGGAGCACCGGGCCCTCAGGGCCGGGCGCCCAGCACCATCTCC
AGCACGATGGAGGGATCGAG

Downstream 100 bases:

>100_bases
CCCGCCGGCGTCGACCCGCGACCCTCCCGCCGGGTCAGACCCCGAGGTGCTTGGTGGCGAAGATGGCCGCCTGGGTGCGG
CTCTCGAGGCCGAGCTTGGC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTTRPESEGRLATLLSYDCWNLLESVHIARVAWIGPEGVAVVPVNYTVVAGAVWFRTTPDSTLARECHGQRVVVEVDEID
PTTRAGWSVVVVGTAELVDAHDVPDMLIGLEVWPSGTRTLFVRVDVHEVSGRRLYGAHGT

Sequences:

>Translated_140_residues
MTTRPESEGRLATLLSYDCWNLLESVHIARVAWIGPEGVAVVPVNYTVVAGAVWFRTTPDSTLARECHGQRVVVEVDEID
PTTRAGWSVVVVGTAELVDAHDVPDMLIGLEVWPSGTRTLFVRVDVHEVSGRRLYGAHGT
>Mature_139_residues
TTRPESEGRLATLLSYDCWNLLESVHIARVAWIGPEGVAVVPVNYTVVAGAVWFRTTPDSTLARECHGQRVVVEVDEIDP
TTRAGWSVVVVGTAELVDAHDVPDMLIGLEVWPSGTRTLFVRVDVHEVSGRRLYGAHGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15321; Mature: 15189

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRPESEGRLATLLSYDCWNLLESVHIARVAWIGPEGVAVVPVNYTVVAGAVWFRTTPD
CCCCCCCCCCEEEEEHHHHHHHHHHHHEEEEEEECCCCEEEEEECEEEEEEEEEEEECCC
STLARECHGQRVVVEVDEIDPTTRAGWSVVVVGTAELVDAHDVPDMLIGLEVWPSGTRTL
HHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECHHEECCCCCCCEEEEEEECCCCCEEE
FVRVDVHEVSGRRLYGAHGT
EEEEEEEECCCCEEECCCCC
>Mature Secondary Structure 
TTRPESEGRLATLLSYDCWNLLESVHIARVAWIGPEGVAVVPVNYTVVAGAVWFRTTPD
CCCCCCCCCEEEEEHHHHHHHHHHHHEEEEEEECCCCEEEEEECEEEEEEEEEEEECCC
STLARECHGQRVVVEVDEIDPTTRAGWSVVVVGTAELVDAHDVPDMLIGLEVWPSGTRTL
HHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECHHEECCCCCCCEEEEEEECCCCCEEE
FVRVDVHEVSGRRLYGAHGT
EEEEEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA