| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715234
Identifier: 119715234
GI number: 119715234
Start: 1041028
End: 1041618
Strand: Reverse
Name: 119715234
Synonym: Noca_0991
Alternate gene names: NA
Gene position: 1041618-1041028 (Counterclockwise)
Preceding gene: 119715236
Following gene: 119715233
Centisome position: 20.89
GC content: 73.27
Gene sequence:
>591_bases ATGCTGGTGCAGGACCTGATGACACCGGAGCCGATGACGGTGCGTCCCTCGACCACGGTCAAGGCGGCGCTCTCGCGCCT GGCCGAGTTCGGGATCACCTGCCTGCCGGTCGTCGACGGCGCCGGCCGCCTGCAGGGCGTGGTCAGCGAGGCCGACCTGA TCCGCGACGTCGTCGCCCCGGACCCGCGCGCCCAGGAGCGCCCGGTCACGATCGAGCCCGTCTTCCCGCCGCGCACGGTC GAGGAGGTCTACACCCGGCACCCGGTGTCGGTACGTCGCAACGACGACCTGGCGCGGGCCGTGGACGTGATGACCTCGAC GGCGGTCAAGAGCCTGCCGGTCGTCGACGACGAGGGCCGCCTGGTCGGGGTCGTCAGCCGCAGCGACGTGGTCCAGGTCC TGGCCCGCGCCGACGACGTGATCGCCGCGGACATCGACGAGCTGCTGCGCTCCCTGGGGCACCCCGACTGGCTCGTGGAG GTCACCGAGGGCATCGTCAGCGTCTCCGGGCCCAGCGGCGCGCCCGAGCGCTCGCTCGCGCAGGTGGTGGCCCACACCGT GCCCGGCGTGATCGAGGTCCGGGTCGACTGA
Upstream 100 bases:
>100_bases CCCCGCACACCGGAGGCTGGAGACAGGACCGACGGACCCGTCGGATCCAAGGCCGGACCCAAGGCTGGACCCGAGGCCGA ATCCAAGGAGGGAGAGCACG
Downstream 100 bases:
>100_bases GCTCCTTCCATCTTTCGTTCCCGCTCACCAGGTCTCGGGACCTAGGTCTCTGGTCCCGTGCCCCGGTGGCGCCCATCGTT GAGCACTCGAGGGGGGTGCA
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; Signal Transduction Protein; Signal-Transduction Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLVQDLMTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIRDVVAPDPRAQERPVTIEPVFPPRTV EEVYTRHPVSVRRNDDLARAVDVMTSTAVKSLPVVDDEGRLVGVVSRSDVVQVLARADDVIAADIDELLRSLGHPDWLVE VTEGIVSVSGPSGAPERSLAQVVAHTVPGVIEVRVD
Sequences:
>Translated_196_residues MLVQDLMTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIRDVVAPDPRAQERPVTIEPVFPPRTV EEVYTRHPVSVRRNDDLARAVDVMTSTAVKSLPVVDDEGRLVGVVSRSDVVQVLARADDVIAADIDELLRSLGHPDWLVE VTEGIVSVSGPSGAPERSLAQVVAHTVPGVIEVRVD >Mature_196_residues MLVQDLMTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIRDVVAPDPRAQERPVTIEPVFPPRTV EEVYTRHPVSVRRNDDLARAVDVMTSTAVKSLPVVDDEGRLVGVVSRSDVVQVLARADDVIAADIDELLRSLGHPDWLVE VTEGIVSVSGPSGAPERSLAQVVAHTVPGVIEVRVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21008; Mature: 21008
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVQDLMTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIRDVVAP CCCCHHCCCCCCEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC DPRAQERPVTIEPVFPPRTVEEVYTRHPVSVRRNDDLARAVDVMTSTAVKSLPVVDDEGR CCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC LVGVVSRSDVVQVLARADDVIAADIDELLRSLGHPDWLVEVTEGIVSVSGPSGAPERSLA EEEEECHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCHHHHH QVVAHTVPGVIEVRVD HHHHHHCCCEEEEEEC >Mature Secondary Structure MLVQDLMTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIRDVVAP CCCCHHCCCCCCEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC DPRAQERPVTIEPVFPPRTVEEVYTRHPVSVRRNDDLARAVDVMTSTAVKSLPVVDDEGR CCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC LVGVVSRSDVVQVLARADDVIAADIDELLRSLGHPDWLVEVTEGIVSVSGPSGAPERSLA EEEEECHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCHHHHH QVVAHTVPGVIEVRVD HHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA