| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715131
Identifier: 119715131
GI number: 119715131
Start: 925050
End: 927533
Strand: Direct
Name: 119715131
Synonym: Noca_0886
Alternate gene names: NA
Gene position: 925050-927533 (Clockwise)
Preceding gene: 119715130
Following gene: 119715134
Centisome position: 18.55
GC content: 72.99
Gene sequence:
>2484_bases ATGACCATGTCTGCGCTCGCGCGCGCCCGCGCTCTTCGCCTTCCGCTCGCCGGAGCGATGATCACCGGGGTCCTGGCCGC CGCCGGACTGTCCGGGACCGCCGCCGAGGCCACCACGCCGCCGGCCTGCGAGCCCGTGTCGAACGCGTTCGGACCGGCCA CCGGGTGGACCGAGTTCGTCGAGGGGAACGGCAGCCGCGGCGCCGAGTCCGAGGGCGCCATCGCGTACGGCGGGAACCAC ACTGCCGGCGGGATGACCGTCGGCACCCGCCTGCCGTCCGGCTTCCCGGTCGGCTCCGCCGCGCTCGTCGTGGCCGGCAG CCATGGCACCTACAACCTCCAGAAGGGCAGCGCCTACGTCACGCCGCCGTCGGGGGTGAACTTCAACGGGGGCCCCGGTA CGGGTTACCTCGCAAGCAACCCCGTCGACTTCGCGACCTCCTTCACCCAGCTGCGCGCGCTGTCGACGGCGTGGGGGGCC GCGACCGCGAACGGCACCGTCGGCAGCGGTACGGCGGGAGGCAACCCCGCGCTGGTGTTCACCGGCACCGACCCGTCGTT GAACGTGTTCACGCTGACGGTCGCTCAGGCCGCCGACCTCGCGTCCGGCAAGCACGTCGGCTACCAGGTCCCGGGTGGTG CCACGACCATCATCAACGTGCCCGGGACCTCGGTGGCCCTGGCCGGCCAGATGTGGGACCTGTCGTCCGGCGCCAGCCAG GTCAACGACGCGGTGATGGCGTCCTACCCCGGCATCATCTGGAACTTCCCCGACGCCACCACGCTGACCATGAGCTACGG GTCGGCCTGGGGCGGGCACATCCTCGCGCCGAGGGCGGCGTTCACGGTGAGCGCGGTCGGCCACACGATCGGCCAGGTCA TCGCGAAGAGCTTCTCGTCGGCCTACGAGACGCACCAGAACCTGCTGCCGAGCAGCGCCTGCGTCCCGCCGCCGCCTCCG ACCCCGGGTACGCCGGACGTGACGATCACCAAGTCGGCCTCGACCGCGACCCCGACGGGCGGTGACACCTTCACCTACAC GTTGACCGCCACGAACGTCGGTGACGCCGACGCGACCGGCGTGGTCGTCCGCGACGCGCTGCCGGCCGGCGTCACGTTCG GGTCCGCCTCGGCGCCCTGCACGCAGTCCGCCGGAGTCGTGACCTGCACGGTCGGCAACCTCGCGGCGGGAGCCTCCACC ACGGTGACGATCACGGTGACCGCGAACCCGATCGCCGGCGCGGGACCGGTGGTGCACCCGGGTGGTGACCACTGGATGAC GCCGTACCACCCGGAGGCCCAGGTCGACCTCGATCCCGGCCAGCAGCGCAGCATCACGCTGGGCTGCAACCCCGGGGACA TCCTCAGCGACGGCGACTTCCGGATCGACCACGTCGACCAGGGGACCGGCGCGTTCTCCGACGTGAAGGTGCTCAGCTCG CGCAGCATCGGCACCGGCACCTGGAAGGGCGTGATCCGCAACGACGCGACCGGCCGGGTCCAGGCGAAGGCCTTCATCGT CTGCCTGCCGGGCCGGACCGAGGGCGGCAACGACGGCCACCGCCACGACCTCCTGGTCGACGCCGCCCCGGTCACGCTGA CCCAGTCGCTACCGGTCGGTCGCACCCAGGTGACGCTGACCTGTCGGGCCGGCACCGTGCCGATCGCGCCGGGCTACGAC CTCTCCTCCGCCGGTGCCGTCCTGGTCGGCTCGGAGACGAGCTATCCGGCCCGCACCTGGACGCTGACCTTCCGCGCCAC CGCGCCGGTGACCGTGACCGCCAGCGCGTTGTGCCTGTCGACGACGACCAGCGCGGTCGACGGGCACACCCACCAGCTGC GCTTCACCCACGTCGTCGACCACGTGACCGTTCCCGCGGACACCCCGGCCGAGGGCCTCGAGATCAAGGTCAGCTGCCCG GACGACGGCAAGGGCGTCGTCGCGACCTTCGACCTGCCCGAGGGCGTCACCACGTGGGGGCACGACCCTCGGCTCAAGGA GCGCGCGTTCCGGCTCTACAACGAGTCGGGCGCGGCCACGGACGCGGTCCTCGACCTGGTCTGCCTCAACGACCGCGTCG GGACCGACATGGGCACCGACGAGCCGACGACCGTCGTCAACACCGCCACCGTCTCGTCGAGCTCGACCGACGCCAACCCC GCCAACAACGCGGCGAGCGCCACCGTGACGGTGCTGCCCGGCTCGTCCACCACGAGCCTCGCCGGGCGGCTGCGGGTCTC CGGGTCGACGTCGTCGCTGCGGGTGCTGTCCTCGATGCCGGGCCGCGGGAAGCTCGCCGTCCGCTCGCAGGGCGTCCTTC TCGCCCGGGGTGAGGTCGGCCTGCGGGCCGGCGGTGAGGCCACCGCCCGGCTGCGGCTGACCGACGCCGGCCGGCGCGGG CTCGCGCGCCTGGACCGGGTGCAGGTCACCGTCGACCCCACCCGTGGCAGGACGGTCCGGCGGACGGTGCCCGTCCAGCG GTAG
Upstream 100 bases:
>100_bases TCCGTCCGGTCCAGTCCGCCGGGCGTGGATTCGGCCGTTCTCCGGTGCGCCGGCGGCCCCGGATGGGACGGTCGGCCCAG GACATCCAGGGGGGACCGTC
Downstream 100 bases:
>100_bases GCGCCCGACTCGCTGGCGTCAGACCGGGAGGCCGCGGGCGCGCAGCTCCTCGCGCAGCGCCGCCGCGTCGGTGAACAGGA TCGCGTCCATGCCGAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 827; Mature: 826
Protein sequence:
>827_residues MTMSALARARALRLPLAGAMITGVLAAAGLSGTAAEATTPPACEPVSNAFGPATGWTEFVEGNGSRGAESEGAIAYGGNH TAGGMTVGTRLPSGFPVGSAALVVAGSHGTYNLQKGSAYVTPPSGVNFNGGPGTGYLASNPVDFATSFTQLRALSTAWGA ATANGTVGSGTAGGNPALVFTGTDPSLNVFTLTVAQAADLASGKHVGYQVPGGATTIINVPGTSVALAGQMWDLSSGASQ VNDAVMASYPGIIWNFPDATTLTMSYGSAWGGHILAPRAAFTVSAVGHTIGQVIAKSFSSAYETHQNLLPSSACVPPPPP TPGTPDVTITKSASTATPTGGDTFTYTLTATNVGDADATGVVVRDALPAGVTFGSASAPCTQSAGVVTCTVGNLAAGAST TVTITVTANPIAGAGPVVHPGGDHWMTPYHPEAQVDLDPGQQRSITLGCNPGDILSDGDFRIDHVDQGTGAFSDVKVLSS RSIGTGTWKGVIRNDATGRVQAKAFIVCLPGRTEGGNDGHRHDLLVDAAPVTLTQSLPVGRTQVTLTCRAGTVPIAPGYD LSSAGAVLVGSETSYPARTWTLTFRATAPVTVTASALCLSTTTSAVDGHTHQLRFTHVVDHVTVPADTPAEGLEIKVSCP DDGKGVVATFDLPEGVTTWGHDPRLKERAFRLYNESGAATDAVLDLVCLNDRVGTDMGTDEPTTVVNTATVSSSSTDANP ANNAASATVTVLPGSSTTSLAGRLRVSGSTSSLRVLSSMPGRGKLAVRSQGVLLARGEVGLRAGGEATARLRLTDAGRRG LARLDRVQVTVDPTRGRTVRRTVPVQR
Sequences:
>Translated_827_residues MTMSALARARALRLPLAGAMITGVLAAAGLSGTAAEATTPPACEPVSNAFGPATGWTEFVEGNGSRGAESEGAIAYGGNH TAGGMTVGTRLPSGFPVGSAALVVAGSHGTYNLQKGSAYVTPPSGVNFNGGPGTGYLASNPVDFATSFTQLRALSTAWGA ATANGTVGSGTAGGNPALVFTGTDPSLNVFTLTVAQAADLASGKHVGYQVPGGATTIINVPGTSVALAGQMWDLSSGASQ VNDAVMASYPGIIWNFPDATTLTMSYGSAWGGHILAPRAAFTVSAVGHTIGQVIAKSFSSAYETHQNLLPSSACVPPPPP TPGTPDVTITKSASTATPTGGDTFTYTLTATNVGDADATGVVVRDALPAGVTFGSASAPCTQSAGVVTCTVGNLAAGAST TVTITVTANPIAGAGPVVHPGGDHWMTPYHPEAQVDLDPGQQRSITLGCNPGDILSDGDFRIDHVDQGTGAFSDVKVLSS RSIGTGTWKGVIRNDATGRVQAKAFIVCLPGRTEGGNDGHRHDLLVDAAPVTLTQSLPVGRTQVTLTCRAGTVPIAPGYD LSSAGAVLVGSETSYPARTWTLTFRATAPVTVTASALCLSTTTSAVDGHTHQLRFTHVVDHVTVPADTPAEGLEIKVSCP DDGKGVVATFDLPEGVTTWGHDPRLKERAFRLYNESGAATDAVLDLVCLNDRVGTDMGTDEPTTVVNTATVSSSSTDANP ANNAASATVTVLPGSSTTSLAGRLRVSGSTSSLRVLSSMPGRGKLAVRSQGVLLARGEVGLRAGGEATARLRLTDAGRRG LARLDRVQVTVDPTRGRTVRRTVPVQR >Mature_826_residues TMSALARARALRLPLAGAMITGVLAAAGLSGTAAEATTPPACEPVSNAFGPATGWTEFVEGNGSRGAESEGAIAYGGNHT AGGMTVGTRLPSGFPVGSAALVVAGSHGTYNLQKGSAYVTPPSGVNFNGGPGTGYLASNPVDFATSFTQLRALSTAWGAA TANGTVGSGTAGGNPALVFTGTDPSLNVFTLTVAQAADLASGKHVGYQVPGGATTIINVPGTSVALAGQMWDLSSGASQV NDAVMASYPGIIWNFPDATTLTMSYGSAWGGHILAPRAAFTVSAVGHTIGQVIAKSFSSAYETHQNLLPSSACVPPPPPT PGTPDVTITKSASTATPTGGDTFTYTLTATNVGDADATGVVVRDALPAGVTFGSASAPCTQSAGVVTCTVGNLAAGASTT VTITVTANPIAGAGPVVHPGGDHWMTPYHPEAQVDLDPGQQRSITLGCNPGDILSDGDFRIDHVDQGTGAFSDVKVLSSR SIGTGTWKGVIRNDATGRVQAKAFIVCLPGRTEGGNDGHRHDLLVDAAPVTLTQSLPVGRTQVTLTCRAGTVPIAPGYDL SSAGAVLVGSETSYPARTWTLTFRATAPVTVTASALCLSTTTSAVDGHTHQLRFTHVVDHVTVPADTPAEGLEIKVSCPD DGKGVVATFDLPEGVTTWGHDPRLKERAFRLYNESGAATDAVLDLVCLNDRVGTDMGTDEPTTVVNTATVSSSSTDANPA NNAASATVTVLPGSSTTSLAGRLRVSGSTSSLRVLSSMPGRGKLAVRSQGVLLARGEVGLRAGGEATARLRLTDAGRRGL ARLDRVQVTVDPTRGRTVRRTVPVQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83745; Mature: 83614
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSALARARALRLPLAGAMITGVLAAAGLSGTAAEATTPPACEPVSNAFGPATGWTEFV CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHH EGNGSRGAESEGAIAYGGNHTAGGMTVGTRLPSGFPVGSAALVVAGSHGTYNLQKGSAYV CCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCEEE TPPSGVNFNGGPGTGYLASNPVDFATSFTQLRALSTAWGAATANGTVGSGTAGGNPALVF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE TGTDPSLNVFTLTVAQAADLASGKHVGYQVPGGATTIINVPGTSVALAGQMWDLSSGASQ ECCCCCCEEEEEEEEHHHHHCCCCCCCEECCCCCEEEEECCCCEEEEEEEEEECCCCHHH VNDAVMASYPGIIWNFPDATTLTMSYGSAWGGHILAPRAAFTVSAVGHTIGQVIAKSFSS HHCHHHHCCCCEEEECCCCEEEEEECCCCCCCCEECCCHHEEHHHHHHHHHHHHHHHHHH AYETHQNLLPSSACVPPPPPTPGTPDVTITKSASTATPTGGDTFTYTLTATNVGDADATG HHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCC VVVRDALPAGVTFGSASAPCTQSAGVVTCTVGNLAAGASTTVTITVTANPIAGAGPVVHP EEEECCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEECC GGDHWMTPYHPEAQVDLDPGQQRSITLGCNPGDILSDGDFRIDHVDQGTGAFSDVKVLSS CCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHC RSIGTGTWKGVIRNDATGRVQAKAFIVCLPGRTEGGNDGHRHDLLVDAAPVTLTQSLPVG CCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEECCCCCC RTQVTLTCRAGTVPIAPGYDLSSAGAVLVGSETSYPARTWTLTFRATAPVTVTASALCLS CEEEEEEEECCCEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCEEEEEEEEEEE TTTSAVDGHTHQLRFTHVVDHVTVPADTPAEGLEIKVSCPDDGKGVVATFDLPEGVTTWG CCCHHCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC HDPRLKERAFRLYNESGAATDAVLDLVCLNDRVGTDMGTDEPTTVVNTATVSSSSTDANP CCCHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCC ANNAASATVTVLPGSSTTSLAGRLRVSGSTSSLRVLSSMPGRGKLAVRSQGVLLARGEVG CCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEHHHHCCCCCCEEEEECCCEEEEECCCC LRAGGEATARLRLTDAGRRGLARLDRVQVTVDPTRGRTVRRTVPVQR EECCCCCEEEEEEECCCCCCHHEEEEEEEEECCCCCCEEEECCCCCC >Mature Secondary Structure TMSALARARALRLPLAGAMITGVLAAAGLSGTAAEATTPPACEPVSNAFGPATGWTEFV CHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHH EGNGSRGAESEGAIAYGGNHTAGGMTVGTRLPSGFPVGSAALVVAGSHGTYNLQKGSAYV CCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCEEE TPPSGVNFNGGPGTGYLASNPVDFATSFTQLRALSTAWGAATANGTVGSGTAGGNPALVF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE TGTDPSLNVFTLTVAQAADLASGKHVGYQVPGGATTIINVPGTSVALAGQMWDLSSGASQ ECCCCCCEEEEEEEEHHHHHCCCCCCCEECCCCCEEEEECCCCEEEEEEEEEECCCCHHH VNDAVMASYPGIIWNFPDATTLTMSYGSAWGGHILAPRAAFTVSAVGHTIGQVIAKSFSS HHCHHHHCCCCEEEECCCCEEEEEECCCCCCCCEECCCHHEEHHHHHHHHHHHHHHHHHH AYETHQNLLPSSACVPPPPPTPGTPDVTITKSASTATPTGGDTFTYTLTATNVGDADATG HHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCC VVVRDALPAGVTFGSASAPCTQSAGVVTCTVGNLAAGASTTVTITVTANPIAGAGPVVHP EEEECCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEECC GGDHWMTPYHPEAQVDLDPGQQRSITLGCNPGDILSDGDFRIDHVDQGTGAFSDVKVLSS CCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHC RSIGTGTWKGVIRNDATGRVQAKAFIVCLPGRTEGGNDGHRHDLLVDAAPVTLTQSLPVG CCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEECCCCCC RTQVTLTCRAGTVPIAPGYDLSSAGAVLVGSETSYPARTWTLTFRATAPVTVTASALCLS CEEEEEEEECCCEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCEEEEEEEEEEE TTTSAVDGHTHQLRFTHVVDHVTVPADTPAEGLEIKVSCPDDGKGVVATFDLPEGVTTWG CCCHHCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC HDPRLKERAFRLYNESGAATDAVLDLVCLNDRVGTDMGTDEPTTVVNTATVSSSSTDANP CCCHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCC ANNAASATVTVLPGSSTTSLAGRLRVSGSTSSLRVLSSMPGRGKLAVRSQGVLLARGEVG CCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEHHHHCCCCCCEEEEECCCEEEEECCCC LRAGGEATARLRLTDAGRRGLARLDRVQVTVDPTRGRTVRRTVPVQR EECCCCCEEEEEEECCCCCCHHEEEEEEEEECCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA