Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119715121
Identifier: 119715121
GI number: 119715121
Start: 915993
End: 916691
Strand: Reverse
Name: 119715121
Synonym: Noca_0876
Alternate gene names: NA
Gene position: 916691-915993 (Counterclockwise)
Preceding gene: 119715122
Following gene: 119715113
Centisome position: 18.39
GC content: 68.24
Gene sequence:
>699_bases GTGAGTGCAGTGGTCGTCTACAACGAGCTGGTCGCCATCACCGCAGGCGCAGGGCTTCTCGGATTCGCAGCGTTCCTGAC CGACCTGATCCGCAACAAGCGGATCGCGAGCGAGGCCTGGGCCGCATTCTTCGGCATCACCGGTGGACTGCTTCTCGTCA CCGGTCTCCACACCACGCTGACCTGGCCGTTCGGCGACGGCGGGTTCGAGTACGCCAACATCGCGTTCGGTCAGCCGGCC GCGGGCTTCGGCGCGCTGCTCCTGCTCGCCGCGGTGTACCTGTGGCGGCACCGGGTCCTCTTCGACGGCGAGGTCGGTAC GGCGAACGCCACGGCTCTCGCGGCCCTCAAGCCGGCCGGCATCTTCGTGGGTGCGCTCGGCCTCGGCATGGCCGTGCTGG CCATCGCGTTCGTCCGCTTCCAGCTGGGTGCCGCTCCGGCGGTGGAGCCGATCAGCGGCCGGTTCGGCGACTGGCCGATC CTCGAGGCGCTGTTCCTCGGCGGGCTCTGGGGCATCGTGGCCCTCGGTGCGCTGCTCTTCGCGATCGCGCTGTGGACCGA CCGCCCACAGCTACTGCGCTGGGCCGTCTGGGCCTGGGTGATCGGCGGCGTGGTGTTCCTGCTCTTCGGCGCGATGAACT TCTACACGCACATCGGCATGTACTACAACATCTCCCACGGCACGATGCACAAGTGGTGA
Upstream 100 bases:
>100_bases ACTCGATCGCCGCTCCCCGGAATATTCGCTACAGCCGTGCGTTGAGGTTAGTACAACCTTCAACTAATTGCTGGCGACGA GCCGGCGGAGCAAGGAAAGA
Downstream 100 bases:
>100_bases GCCGGTCGTCCGGTCGGCCCTGAGCGGGCCTCGACCCACCCGGTCGCGCCGACTGCGACAGACCTGGAGCCCCGAGGCGA ACCCTCGGGGCTCCGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSAVVVYNELVAITAGAGLLGFAAFLTDLIRNKRIASEAWAAFFGITGGLLLVTGLHTTLTWPFGDGGFEYANIAFGQPA AGFGALLLLAAVYLWRHRVLFDGEVGTANATALAALKPAGIFVGALGLGMAVLAIAFVRFQLGAAPAVEPISGRFGDWPI LEALFLGGLWGIVALGALLFAIALWTDRPQLLRWAVWAWVIGGVVFLLFGAMNFYTHIGMYYNISHGTMHKW
Sequences:
>Translated_232_residues MSAVVVYNELVAITAGAGLLGFAAFLTDLIRNKRIASEAWAAFFGITGGLLLVTGLHTTLTWPFGDGGFEYANIAFGQPA AGFGALLLLAAVYLWRHRVLFDGEVGTANATALAALKPAGIFVGALGLGMAVLAIAFVRFQLGAAPAVEPISGRFGDWPI LEALFLGGLWGIVALGALLFAIALWTDRPQLLRWAVWAWVIGGVVFLLFGAMNFYTHIGMYYNISHGTMHKW >Mature_231_residues SAVVVYNELVAITAGAGLLGFAAFLTDLIRNKRIASEAWAAFFGITGGLLLVTGLHTTLTWPFGDGGFEYANIAFGQPAA GFGALLLLAAVYLWRHRVLFDGEVGTANATALAALKPAGIFVGALGLGMAVLAIAFVRFQLGAAPAVEPISGRFGDWPIL EALFLGGLWGIVALGALLFAIALWTDRPQLLRWAVWAWVIGGVVFLLFGAMNFYTHIGMYYNISHGTMHKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24731; Mature: 24600
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVVVYNELVAITAGAGLLGFAAFLTDLIRNKRIASEAWAAFFGITGGLLLVTGLHTTL CCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEE TWPFGDGGFEYANIAFGQPAAGFGALLLLAAVYLWRHRVLFDGEVGTANATALAALKPAG EECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCHH IFVGALGLGMAVLAIAFVRFQLGAAPAVEPISGRFGDWPILEALFLGGLWGIVALGALLF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AIALWTDRPQLLRWAVWAWVIGGVVFLLFGAMNFYTHIGMYYNISHGTMHKW HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC >Mature Secondary Structure SAVVVYNELVAITAGAGLLGFAAFLTDLIRNKRIASEAWAAFFGITGGLLLVTGLHTTL CEEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEE TWPFGDGGFEYANIAFGQPAAGFGALLLLAAVYLWRHRVLFDGEVGTANATALAALKPAG EECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCHH IFVGALGLGMAVLAIAFVRFQLGAAPAVEPISGRFGDWPILEALFLGGLWGIVALGALLF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AIALWTDRPQLLRWAVWAWVIGGVVFLLFGAMNFYTHIGMYYNISHGTMHKW HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA