The gene/protein map for NC_008699 is currently unavailable.
Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119715114

Identifier: 119715114

GI number: 119715114

Start: 907548

End: 908882

Strand: Direct

Name: 119715114

Synonym: Noca_0869

Alternate gene names: NA

Gene position: 907548-908882 (Clockwise)

Preceding gene: 119715112

Following gene: 119715115

Centisome position: 18.2

GC content: 68.54

Gene sequence:

>1335_bases
ATGAAGCGCACATCACCCGTCTCGGGCTCGCTCGCCGGGATCACCGCCCCCCGGCCGACGCGTCGTGGCCTGCTCGTGGG
CGGAGGTGCGCTCGGCCTGTCCGGCCTGCTGGTCGCGTGCGGGGTCGGCGGTGGCGGCGGCGAGAAGGGCGGTGGTGGCA
GCGGCAGCGGCAGCATCCGCGCCCTGTTCATGCAGCAGGCGGGCTACTCCGAGGACAACATCAAGGAGATGACGGCGGCC
TTCATGAAGGCCAACACCGACATCAAGGTCACCGCCGACTTCGTCTCCTACGAGGCGCTGCACGACAAGATCGTGGCGGC
CGCGCCGGCGGGCACCTATGACGTCGTGCTGATCGACGTGATCTGGCCGGCCGAGTTCGGCACCAAGAACATCGTCGCCG
ACGTCACCGACCGGTGGCCCGACGAGTGGAAGCAGCAGATGCTCGGCGGCGCGGTCGCGACGCCGCAGTACGACGGCAAG
TTCTACGGGGTCCCGTGGATCCTGGACACCAAGTATCTCTTCTACAACACCGCCCAGCTCGAGAAGGCGAAGGTCGACGC
CGGCGAGCTCGACACCTGGGACGGCGTCCTCAGCGCGGCCCGCGCGCTCAAGCAGAGCGGTGTCCAGTACCCGCTGATCT
GGTCCTGGCAGCAGGCGGAGGCCTTGATCTGCGACTACACCCAGCTCCTCGGTGCCTTCGGCGGAACCTTCCTCGACGAC
GCGGGCCAGCCCGCGTTCAACCAGGGAGGCGGCGTCGCTGCGCTGGAGTTCATGCGGCAGAGCATCGTCGACGGGCTCAC
CAACCCCGCCTCGACGCAGTCGCTCGAGGAGGACGTGCGGCGCGTGTTCTCCTCCGGTCAGGCCAGCATCGCCCTGAACT
GGACCTACATGTACGGCCTCGCCAACGACCCCAAGGAGAGCCAGATCCCCGGCGACGTCGCGGTGCTGCAGACCCCGAGC
GGCCCGGTCGGCCGCCCCGGCGTGAACGGCAGCATGGCGCTCTCCCTCTCCGCGACCAGTGAGAACCAGGATGCCGGCTG
GAAGTACATCGAGTACCTCACCAGCCAGCCGGTCCAGGACAAGTACGCCCTCAGCTCGCTGCCCGTGTGGTCGTCGTCGT
ACGACGACCCCAAGGTCGTCGACACGAACCCCGCCGTCGTGCCGCAGGCCAAGAAGCAGCTCGGCGACATGATCCTGCGG
CCCCAGGTCGCCAGCTACAACGCGATGTCCCAGGTGCTCCAGGCCGAGATCCAGAAGGCCCTGCTCGGTGACAAGGAGCC
GCAGCAGGCGCTGGACGACGCAGCCTCCCAGGCGGCCGACCTGCTGGAGTCCTGA

Upstream 100 bases:

>100_bases
TGGTGCGGCAGTCACAAATCTCCTTCGTCGCTCTTGACGCGTCCCGGTGCCGCTGACAATATCCATTCAATAAGCAACCT
GCCTAACAAATGGAGATGTC

Downstream 100 bases:

>100_bases
TCGTGTCCTCGACCCTGCGAGCGGGTAGGCGCCTCCGGGTCCGCGGCGGTCAGCACGAGGGGCGCTTCGCGCTGCTCCTG
CTGCTGCCTGCGGCCGTGGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKRTSPVSGSLAGITAPRPTRRGLLVGGGALGLSGLLVACGVGGGGGEKGGGGSGSGSIRALFMQQAGYSEDNIKEMTAA
FMKANTDIKVTADFVSYEALHDKIVAAAPAGTYDVVLIDVIWPAEFGTKNIVADVTDRWPDEWKQQMLGGAVATPQYDGK
FYGVPWILDTKYLFYNTAQLEKAKVDAGELDTWDGVLSAARALKQSGVQYPLIWSWQQAEALICDYTQLLGAFGGTFLDD
AGQPAFNQGGGVAALEFMRQSIVDGLTNPASTQSLEEDVRRVFSSGQASIALNWTYMYGLANDPKESQIPGDVAVLQTPS
GPVGRPGVNGSMALSLSATSENQDAGWKYIEYLTSQPVQDKYALSSLPVWSSSYDDPKVVDTNPAVVPQAKKQLGDMILR
PQVASYNAMSQVLQAEIQKALLGDKEPQQALDDAASQAADLLES

Sequences:

>Translated_444_residues
MKRTSPVSGSLAGITAPRPTRRGLLVGGGALGLSGLLVACGVGGGGGEKGGGGSGSGSIRALFMQQAGYSEDNIKEMTAA
FMKANTDIKVTADFVSYEALHDKIVAAAPAGTYDVVLIDVIWPAEFGTKNIVADVTDRWPDEWKQQMLGGAVATPQYDGK
FYGVPWILDTKYLFYNTAQLEKAKVDAGELDTWDGVLSAARALKQSGVQYPLIWSWQQAEALICDYTQLLGAFGGTFLDD
AGQPAFNQGGGVAALEFMRQSIVDGLTNPASTQSLEEDVRRVFSSGQASIALNWTYMYGLANDPKESQIPGDVAVLQTPS
GPVGRPGVNGSMALSLSATSENQDAGWKYIEYLTSQPVQDKYALSSLPVWSSSYDDPKVVDTNPAVVPQAKKQLGDMILR
PQVASYNAMSQVLQAEIQKALLGDKEPQQALDDAASQAADLLES
>Mature_444_residues
MKRTSPVSGSLAGITAPRPTRRGLLVGGGALGLSGLLVACGVGGGGGEKGGGGSGSGSIRALFMQQAGYSEDNIKEMTAA
FMKANTDIKVTADFVSYEALHDKIVAAAPAGTYDVVLIDVIWPAEFGTKNIVADVTDRWPDEWKQQMLGGAVATPQYDGK
FYGVPWILDTKYLFYNTAQLEKAKVDAGELDTWDGVLSAARALKQSGVQYPLIWSWQQAEALICDYTQLLGAFGGTFLDD
AGQPAFNQGGGVAALEFMRQSIVDGLTNPASTQSLEEDVRRVFSSGQASIALNWTYMYGLANDPKESQIPGDVAVLQTPS
GPVGRPGVNGSMALSLSATSENQDAGWKYIEYLTSQPVQDKYALSSLPVWSSSYDDPKVVDTNPAVVPQAKKQLGDMILR
PQVASYNAMSQVLQAEIQKALLGDKEPQQALDDAASQAADLLES

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47124; Mature: 47124

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTSPVSGSLAGITAPRPTRRGLLVGGGALGLSGLLVACGVGGGGGEKGGGGSGSGSIR
CCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEE
ALFMQQAGYSEDNIKEMTAAFMKANTDIKVTADFVSYEALHDKIVAAAPAGTYDVVLIDV
EEEEHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHEECCCCCEEEEEEEE
IWPAEFGTKNIVADVTDRWPDEWKQQMLGGAVATPQYDGKFYGVPWILDTKYLFYNTAQL
EECCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCCEEEECCEEEEECHHH
EKAKVDAGELDTWDGVLSAARALKQSGVQYPLIWSWQQAEALICDYTQLLGAFGGTFLDD
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCHHCC
AGQPAFNQGGGVAALEFMRQSIVDGLTNPASTQSLEEDVRRVFSSGQASIALNWTYMYGL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC
ANDPKESQIPGDVAVLQTPSGPVGRPGVNGSMALSLSATSENQDAGWKYIEYLTSQPVQD
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCH
KYALSSLPVWSSSYDDPKVVDTNPAVVPQAKKQLGDMILRPQVASYNAMSQVLQAEIQKA
HHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLGDKEPQQALDDAASQAADLLES
HHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRTSPVSGSLAGITAPRPTRRGLLVGGGALGLSGLLVACGVGGGGGEKGGGGSGSGSIR
CCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEE
ALFMQQAGYSEDNIKEMTAAFMKANTDIKVTADFVSYEALHDKIVAAAPAGTYDVVLIDV
EEEEHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHEECCCCCEEEEEEEE
IWPAEFGTKNIVADVTDRWPDEWKQQMLGGAVATPQYDGKFYGVPWILDTKYLFYNTAQL
EECCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCCEEEECCEEEEECHHH
EKAKVDAGELDTWDGVLSAARALKQSGVQYPLIWSWQQAEALICDYTQLLGAFGGTFLDD
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCHHCC
AGQPAFNQGGGVAALEFMRQSIVDGLTNPASTQSLEEDVRRVFSSGQASIALNWTYMYGL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC
ANDPKESQIPGDVAVLQTPSGPVGRPGVNGSMALSLSATSENQDAGWKYIEYLTSQPVQD
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCH
KYALSSLPVWSSSYDDPKVVDTNPAVVPQAKKQLGDMILRPQVASYNAMSQVLQAEIQKA
HHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLGDKEPQQALDDAASQAADLLES
HHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]