Click here to switch to the map view.

The map label for this gene is flgC [H]

Identifier: 119715008

GI number: 119715008

Start: 806897

End: 807289

Strand: Reverse

Name: flgC [H]

Synonym: Noca_0761

Alternate gene names: 119715008

Gene position: 807289-806897 (Counterclockwise)

Preceding gene: 119715009

Following gene: 119715007

Centisome position: 16.19

GC content: 69.97

Gene sequence:

>393_bases
ATGGGCGCGTTCGACACCCTCACCATCGCCGGCTCGTCGATGGGAGTGCACCAGACCTGGCTCGACACGCTCGCCTCGAA
CATCGCGAACGTCAACACCGTCACGCCGACCAGCCAGAACGCCTTCCAGGCGCAGATGCTGATCGTGCGCTCCGCTGTCG
GCGGCGGCGTCGAGGTCGCCGGCCTCGCGCAGAGCGACCCGCAGGGCCGCCTCGTCTCGGACCCGGGCAACCCGATGGCC
GACGCGGACGGCTACGTGCGGGCGCCCGACATGGACATGTCCACGCAGATGACCCAGCTGGTGATGGCCCAGCGCGGCTT
CCAGGCCTCGGTGCAGGTCACCAAGCAGGCGCAGGAGACCTACACCGCGGCCCTCCAGATCGGGCGTGCCTGA

Upstream 100 bases:

>100_bases
AGACCCTGGCCGCGGTCCAGTCCCAGTTCCAGTACCAGATCCTGACCCGGGCGACCACCGACCGCTTCGCGCTGATCAAG
ACGGCTGCGGGCGTCGCCTG

Downstream 100 bases:

>100_bases
TGAGCGTCAACGGGATCGAGGGCATCGGCTTCACGCCGTACGTCGCGCCGCAGCTCAACCCGACCGACCCGGTCCGCGGG
AGCTCGCAGGCCGGCGCGGC

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MGAFDTLTIAGSSMGVHQTWLDTLASNIANVNTVTPTSQNAFQAQMLIVRSAVGGGVEVAGLAQSDPQGRLVSDPGNPMA
DADGYVRAPDMDMSTQMTQLVMAQRGFQASVQVTKQAQETYTAALQIGRA

Sequences:

>Translated_130_residues
MGAFDTLTIAGSSMGVHQTWLDTLASNIANVNTVTPTSQNAFQAQMLIVRSAVGGGVEVAGLAQSDPQGRLVSDPGNPMA
DADGYVRAPDMDMSTQMTQLVMAQRGFQASVQVTKQAQETYTAALQIGRA
>Mature_129_residues
GAFDTLTIAGSSMGVHQTWLDTLASNIANVNTVTPTSQNAFQAQMLIVRSAVGGGVEVAGLAQSDPQGRLVSDPGNPMAD
ADGYVRAPDMDMSTQMTQLVMAQRGFQASVQVTKQAQETYTAALQIGRA

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=134, Percent_Identity=34.3283582089552, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 13605; Mature: 13474

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAFDTLTIAGSSMGVHQTWLDTLASNIANVNTVTPTSQNAFQAQMLIVRSAVGGGVEVA
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
GLAQSDPQGRLVSDPGNPMADADGYVRAPDMDMSTQMTQLVMAQRGFQASVQVTKQAQET
ECCCCCCCCCEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YTAALQIGRA
HHHHHHCCCC
>Mature Secondary Structure 
GAFDTLTIAGSSMGVHQTWLDTLASNIANVNTVTPTSQNAFQAQMLIVRSAVGGGVEVA
CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
GLAQSDPQGRLVSDPGNPMADADGYVRAPDMDMSTQMTQLVMAQRGFQASVQVTKQAQET
ECCCCCCCCCEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YTAALQIGRA
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]