| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714966
Identifier: 119714966
GI number: 119714966
Start: 763795
End: 764775
Strand: Reverse
Name: 119714966
Synonym: Noca_0719
Alternate gene names: NA
Gene position: 764775-763795 (Counterclockwise)
Preceding gene: 119714967
Following gene: 119714965
Centisome position: 15.34
GC content: 76.15
Gene sequence:
>981_bases GTGATGGCCGACGAGAAGCCCCGCATCGCGCCGCCGCCATCGGTCGACGACGTGCTCTCGGCGCTGACCGACCCCTCCCG GATCGGGCAGGTCGACTTCACCGCCGCGCTCGCCCCGGAGCCGCCCGCGCGGCGGCCCGGACGCAGCGCACGGCAGCCGG ACGCCAAGCCGCCGCTGCGGCGCGTCCCGGAGCCGGTGCCCGCGCCGATCACCGAGCCCGAACCGCGCGGGGAGGAGCCC GAGGCCGAGGCCGAGGTCGCCGAGGTCGCGGAGACGGAGCCCGCCGACGCCGAGCCCACCGACGAGTCCGCCGAGGCGGT CGAGGTCGCGGCCGCCGCCGAACCGGAGCCGGAGCCGGATGCCGAGACCACCGAGGCGGTGCCGGGCCTCGACGAGCAGG CCACCGACGAGCAGGCCACCGAGGGCGCAGCTCCCGAGCCGGAGCCGCAGGCCCGCCCGCGCGAGCCGAAGGTCAAGAAG TCCCGGGCACCCAAGAAGCCGCTCACCATGGTCGAGCAGCCGGAGCCCCAGCAGCCGGAACCCCAGCACGCGGAGACCCC GGAGCCGGAGCCCGAGCAGCCCATGGCCCAGCGGCCGGTGCCCGTGCCGGAGCCGCAGCCCGAGCCGGTCGACGTCGCCC GGACCGTCGAGGAGATCGCGCAGGCCGTGATCAGCCGGATCGAGGCGGCCGAGGAGGCCACGCGGCGACACCTCGAGGCG ATGGAGCTCGAGGCGACCCGCCGCTACGAGCTGGTCACGGCCCAGGCCGAGCTGGACGCCGAGCTGATCCGGCTCCAGTC GCGGCGCGAGGCGCACGCGATCATCACCGCGGCCCGGATGCGCTCCGGTGAGCTCGACGACATCGACGAGTCCGGCGACG AGGGCCACCGCCTGGCGGTGCTCAGCGACGCGATCTCCCGCGTGGCGGACACGGCCGAGTCCACGCTCAACCGGTCCCGA AGCAGAGAGACCGGGTCCTGA
Upstream 100 bases:
>100_bases CACAGCTCCAGGTCGTCTACCGCACGCCGCGCTACGTCCTGGTCAGTGTGCCGGCCGGCTACCAGCCCGGCGGGGCCACG ACCGGGCAGCTGGGGGCATC
Downstream 100 bases:
>100_bases CATGAGCACCCACCGGATCCGCCGGACACACCGCGTCGCCGCCCTGGTCGCGGTCGGCTCGGTGCTGCTCGCCGGCTGCG CGGGCACCGACTCCGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MMADEKPRIAPPPSVDDVLSALTDPSRIGQVDFTAALAPEPPARRPGRSARQPDAKPPLRRVPEPVPAPITEPEPRGEEP EAEAEVAEVAETEPADAEPTDESAEAVEVAAAAEPEPEPDAETTEAVPGLDEQATDEQATEGAAPEPEPQARPREPKVKK SRAPKKPLTMVEQPEPQQPEPQHAETPEPEPEQPMAQRPVPVPEPQPEPVDVARTVEEIAQAVISRIEAAEEATRRHLEA MELEATRRYELVTAQAELDAELIRLQSRREAHAIITAARMRSGELDDIDESGDEGHRLAVLSDAISRVADTAESTLNRSR SRETGS
Sequences:
>Translated_326_residues MMADEKPRIAPPPSVDDVLSALTDPSRIGQVDFTAALAPEPPARRPGRSARQPDAKPPLRRVPEPVPAPITEPEPRGEEP EAEAEVAEVAETEPADAEPTDESAEAVEVAAAAEPEPEPDAETTEAVPGLDEQATDEQATEGAAPEPEPQARPREPKVKK SRAPKKPLTMVEQPEPQQPEPQHAETPEPEPEQPMAQRPVPVPEPQPEPVDVARTVEEIAQAVISRIEAAEEATRRHLEA MELEATRRYELVTAQAELDAELIRLQSRREAHAIITAARMRSGELDDIDESGDEGHRLAVLSDAISRVADTAESTLNRSR SRETGS >Mature_326_residues MMADEKPRIAPPPSVDDVLSALTDPSRIGQVDFTAALAPEPPARRPGRSARQPDAKPPLRRVPEPVPAPITEPEPRGEEP EAEAEVAEVAETEPADAEPTDESAEAVEVAAAAEPEPEPDAETTEAVPGLDEQATDEQATEGAAPEPEPQARPREPKVKK SRAPKKPLTMVEQPEPQQPEPQHAETPEPEPEQPMAQRPVPVPEPQPEPVDVARTVEEIAQAVISRIEAAEEATRRHLEA MELEATRRYELVTAQAELDAELIRLQSRREAHAIITAARMRSGELDDIDESGDEGHRLAVLSDAISRVADTAESTLNRSR SRETGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35343; Mature: 35343
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMADEKPRIAPPPSVDDVLSALTDPSRIGQVDFTAALAPEPPARRPGRSARQPDAKPPLR CCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHH RVPEPVPAPITEPEPRGEEPEAEAEVAEVAETEPADAEPTDESAEAVEVAAAAEPEPEPD HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC AETTEAVPGLDEQATDEQATEGAAPEPEPQARPREPKVKKSRAPKKPLTMVEQPEPQQPE CCHHHHCCCCCCHHCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC PQHAETPEPEPEQPMAQRPVPVPEPQPEPVDVARTVEEIAQAVISRIEAAEEATRRHLEA CCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MELEATRRYELVTAQAELDAELIRLQSRREAHAIITAARMRSGELDDIDESGDEGHRLAV HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHH LSDAISRVADTAESTLNRSRSRETGS HHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMADEKPRIAPPPSVDDVLSALTDPSRIGQVDFTAALAPEPPARRPGRSARQPDAKPPLR CCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHH RVPEPVPAPITEPEPRGEEPEAEAEVAEVAETEPADAEPTDESAEAVEVAAAAEPEPEPD HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC AETTEAVPGLDEQATDEQATEGAAPEPEPQARPREPKVKKSRAPKKPLTMVEQPEPQQPE CCHHHHCCCCCCHHCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC PQHAETPEPEPEQPMAQRPVPVPEPQPEPVDVARTVEEIAQAVISRIEAAEEATRRHLEA CCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MELEATRRYELVTAQAELDAELIRLQSRREAHAIITAARMRSGELDDIDESGDEGHRLAV HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHH LSDAISRVADTAESTLNRSRSRETGS HHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA