| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is add [H]
Identifier: 119714922
GI number: 119714922
Start: 712984
End: 714015
Strand: Reverse
Name: add [H]
Synonym: Noca_0674
Alternate gene names: 119714922
Gene position: 714015-712984 (Counterclockwise)
Preceding gene: 119714923
Following gene: 119714921
Centisome position: 14.32
GC content: 75.1
Gene sequence:
>1032_bases ATGCGCGATCTCCACGAGCTCCCGAAGGCGCACCTGCACCTGCACTTCACCGGGTCGATGCGGCACTCGACGCTGCTCGA GCTCGCGGAGAGGGACGGCATCGTGCTGCCCGACCAGCTCGTGGAGGACTGGCCGCCGCAGCTCTCGGCGGCCGACGAGA AGGGCTGGTTCCGCTTCCAGCGGCTCTACGACGTCGCCCGGTCGGTGCTGCGCACGGAGGGCGACGTGCGCCGGCTGGTG CTCGAGGCCGCGGAGGACGACGTCCGCGACGGCGGCCGCTGGCTGGAGATCCAGGTCGACCCCAGCGGCTACGCCGCCCG CTTCGGCGGCATCACCGCCTTCACCGACCTGGTCCTGGACGCGGTCCGGGACGCCGAGCGGGCCACCGGCCTCGGCATGG CGGTGGTGATCGCGGCCAACCGCACCCGCCACCCGCTCGACGCCCGGACGTTGGCCCGCCTGGCCGCGCAGTACGCCGGC CGCGGGGTGGTCGGCTTCGGGCTCTCCAACGACGAGCGCCGCGGCAGCACCGCCGACTTCGCCCCGGCGTTCAGGATCGC CGAGCGGGCCGGGCTGCTGCTCGCCCCCCACGGCGGCGAGCTGCGCGGGCCCGAGCACGTGCGGCTGTGCCTGGACGCCC TGCACGCCGAGCGCCTCGGCCACGGGATCCGGTCGGCGGAGGACCCGGCCCTGCTGGACCGCATCGTCTCGGCGGGCGTC GCGCTCGAGGTGTGCCCGGTCTCCAACGTCGCGCTCGGCGTGTACTCCGACCTGACCTCGGTGCCACTGCCCACCCTGCT GGCGACCGGGGCGACCGTCGCGCTGGGAGCCGACGACCCGCTCCTGTTCGGCTCGCGGCTGGCCGGCCAGTACGCCACGA TGCGCGCGGCCCACGACCTCACCGACACCCAGCTGGCCGAGCTGGCCCGGATGTCGGTGCGCGCCTCCCGGGCCCCCGGG GACGTCCGGTCCCGTGTCCTTGCCGACATCGACGCCTGGCTCGGAGCCAGTCCTGCGACGATGGGGCCATGA
Upstream 100 bases:
>100_bases CCCCACCCTCAGCGAGGTCACGGAGGCGATGGAAGCCGTCACGGTCTGCGTGCTGCTCGCCGCCTCCGAGAAGCTCCTCG CCTGAGCCGCGCACCACCCG
Downstream 100 bases:
>100_bases GCGACCCGAACCAGCCCGGCGAGCCGCAGCAGCCCTACCAGCAGCCCTACCAGCAGCCCTACGGCGCGGGGCAGTACCAG CAGCCCTACCAGCCCGGGCC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MRDLHELPKAHLHLHFTGSMRHSTLLELAERDGIVLPDQLVEDWPPQLSAADEKGWFRFQRLYDVARSVLRTEGDVRRLV LEAAEDDVRDGGRWLEIQVDPSGYAARFGGITAFTDLVLDAVRDAERATGLGMAVVIAANRTRHPLDARTLARLAAQYAG RGVVGFGLSNDERRGSTADFAPAFRIAERAGLLLAPHGGELRGPEHVRLCLDALHAERLGHGIRSAEDPALLDRIVSAGV ALEVCPVSNVALGVYSDLTSVPLPTLLATGATVALGADDPLLFGSRLAGQYATMRAAHDLTDTQLAELARMSVRASRAPG DVRSRVLADIDAWLGASPATMGP
Sequences:
>Translated_343_residues MRDLHELPKAHLHLHFTGSMRHSTLLELAERDGIVLPDQLVEDWPPQLSAADEKGWFRFQRLYDVARSVLRTEGDVRRLV LEAAEDDVRDGGRWLEIQVDPSGYAARFGGITAFTDLVLDAVRDAERATGLGMAVVIAANRTRHPLDARTLARLAAQYAG RGVVGFGLSNDERRGSTADFAPAFRIAERAGLLLAPHGGELRGPEHVRLCLDALHAERLGHGIRSAEDPALLDRIVSAGV ALEVCPVSNVALGVYSDLTSVPLPTLLATGATVALGADDPLLFGSRLAGQYATMRAAHDLTDTQLAELARMSVRASRAPG DVRSRVLADIDAWLGASPATMGP >Mature_343_residues MRDLHELPKAHLHLHFTGSMRHSTLLELAERDGIVLPDQLVEDWPPQLSAADEKGWFRFQRLYDVARSVLRTEGDVRRLV LEAAEDDVRDGGRWLEIQVDPSGYAARFGGITAFTDLVLDAVRDAERATGLGMAVVIAANRTRHPLDARTLARLAAQYAG RGVVGFGLSNDERRGSTADFAPAFRIAERAGLLLAPHGGELRGPEHVRLCLDALHAERLGHGIRSAEDPALLDRIVSAGV ALEVCPVSNVALGVYSDLTSVPLPTLLATGATVALGADDPLLFGSRLAGQYATMRAAHDLTDTQLAELARMSVRASRAPG DVRSRVLADIDAWLGASPATMGP
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=355, Percent_Identity=26.4788732394366, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI29029552, Length=131, Percent_Identity=36.6412213740458, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI29029550, Length=131, Percent_Identity=36.6412213740458, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI61175224, Length=222, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1787910, Length=333, Percent_Identity=29.7297297297297, Blast_Score=121, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17538512, Length=349, Percent_Identity=24.3553008595989, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32565969, Length=348, Percent_Identity=24.4252873563218, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324188, Length=337, Percent_Identity=26.7062314540059, Blast_Score=107, Evalue=2e-24, Organism=Drosophila melanogaster, GI24645260, Length=330, Percent_Identity=27.8787878787879, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006650 - InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36888; Mature: 36888
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00485 A_DEAMINASE ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLHELPKAHLHLHFTGSMRHSTLLELAERDGIVLPDQLVEDWPPQLSAADEKGWFRFQ CCCHHHCCHHEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHH RLYDVARSVLRTEGDVRRLVLEAAEDDVRDGGRWLEIQVDPSGYAARFGGITAFTDLVLD HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCHHHHHHHHHH AVRDAERATGLGMAVVIAANRTRHPLDARTLARLAAQYAGRGVVGFGLSNDERRGSTADF HHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCH APAFRIAERAGLLLAPHGGELRGPEHVRLCLDALHAERLGHGIRSAEDPALLDRIVSAGV HHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC ALEVCPVSNVALGVYSDLTSVPLPTLLATGATVALGADDPLLFGSRLAGQYATMRAAHDL EEEECCCCCHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC TDTQLAELARMSVRASRAPGDVRSRVLADIDAWLGASPATMGP CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRDLHELPKAHLHLHFTGSMRHSTLLELAERDGIVLPDQLVEDWPPQLSAADEKGWFRFQ CCCHHHCCHHEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHH RLYDVARSVLRTEGDVRRLVLEAAEDDVRDGGRWLEIQVDPSGYAARFGGITAFTDLVLD HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCHHHHHHHHHH AVRDAERATGLGMAVVIAANRTRHPLDARTLARLAAQYAGRGVVGFGLSNDERRGSTADF HHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCH APAFRIAERAGLLLAPHGGELRGPEHVRLCLDALHAERLGHGIRSAEDPALLDRIVSAGV HHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC ALEVCPVSNVALGVYSDLTSVPLPTLLATGATVALGADDPLLFGSRLAGQYATMRAAHDL EEEECCCCCHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC TDTQLAELARMSVRASRAPGDVRSRVLADIDAWLGASPATMGP CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8675024 [H]