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The map label for this gene is pecM [H]

Identifier: 119714873

GI number: 119714873

Start: 657099

End: 658139

Strand: Reverse

Name: pecM [H]

Synonym: Noca_0619

Alternate gene names: 119714873

Gene position: 658139-657099 (Counterclockwise)

Preceding gene: 119714880

Following gene: 119714872

Centisome position: 13.2

GC content: 64.55

Gene sequence:

>1041_bases
ATGACCAGGGCCAAGACTCGCAGAGTGAGTGCAATTGCCGAAGACCCTGTCACCCCCGCGGGGGTGACGCGCGTCACCGT
AGGGGACGCACTACGTGTCAGCCACCAACTGGCGTTGACCGCCGCCACAGCAATCGCGCCGATGGTCTGGGGGACGACAT
ACTCCGTCACAACCGAACTGTTGCCTGCGAACCGCCCACTGTTCGCAGCGCTGATGCGCTCCCTCCCGATAGGGCTGCTG
GCGATACTCCTGACCCGAGTCCTGCCCAGGCGAGACTGGTGGTGGAAGGCAGCTGTACTCGGCATGCTCAACATCGGGTC
CTTCTTTCCGTTGTTGTTCATCGCAGCGGAACGACTGCCGGGCGGGGTCGCCGCGACCCTGGGAGCCGCTCAGCCTCTGT
TCGTGACTGGGCTTGCGGTCGTGATGCTCGGCGAGCGACTGTCACTCTTGCGGCTTGCCTGGGGTGTCGTCGGCCTGGTG
GGTGTGGGTCTCGTCGTCCTCGGGCCGGATGTCGGGTTCGACCCGTTCGGGATCCTCGCGGGGCTAGTCGGCGCATGCGC
CATGGGGGTCGGGATGACGCTCACGAAGCGATGGGGACGGCCGGCCGGGATCAGTCCAATCAGCTTCGCCGCATGGCAAC
TGGCCGTAGGTGGGCTTGCCCTGCTGCCCGCCACGCTTCTCGTCGAAGGTCTGCCCTCGCATGTGGGCATCTCAAGTGCA
GCGGGGTATTTGTGGCTCGGCGCGATCGGCGGCCTACTCGCCTACGCATTGTGGTTTAGAGGTATCGGCCGCCTGCCGGT
GACCTCTGCCGCCCTACTCGGCCTGGTGTCACCGCTCGTGGCAGCGCTCATGGGGATGCTTCTGGGAGAGCGCCTCAACT
CGATTCAGGTCTTCGGGTTCGTGCTCGCTCTCATCGCTGTCGTCGGCGGTTCAGCTCGAGTCAGGCCGATTCAGACCGAC
CGTATCCAGCAGAAGGCGACACTGAACTTGGTCCAACCTGACAAAGTGCCCGCAGAGAATCCGGCTAGGTTCCGACCATG
A

Upstream 100 bases:

>100_bases
GGGCGTCGGCGACTGCCAGGACGTACCGCATCTGTTGAAGATCCACCCATCAATCATGAGGAACGATCGGTTCCATCGCA
ACCCTGCGTTGGACTGATTG

Downstream 100 bases:

>100_bases
CCATCGACCCGCGCCATGCGCCGCTGTTCGAACCGATCCAGGTCGGCCCCAAGATGTTCCGCAATCGGTTCTACGTTTCC
CCCCATTGCTCCGGTCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTRAKTRRVSAIAEDPVTPAGVTRVTVGDALRVSHQLALTAATAIAPMVWGTTYSVTTELLPANRPLFAALMRSLPIGLL
AILLTRVLPRRDWWWKAAVLGMLNIGSFFPLLFIAAERLPGGVAATLGAAQPLFVTGLAVVMLGERLSLLRLAWGVVGLV
GVGLVVLGPDVGFDPFGILAGLVGACAMGVGMTLTKRWGRPAGISPISFAAWQLAVGGLALLPATLLVEGLPSHVGISSA
AGYLWLGAIGGLLAYALWFRGIGRLPVTSAALLGLVSPLVAALMGMLLGERLNSIQVFGFVLALIAVVGGSARVRPIQTD
RIQQKATLNLVQPDKVPAENPARFRP

Sequences:

>Translated_346_residues
MTRAKTRRVSAIAEDPVTPAGVTRVTVGDALRVSHQLALTAATAIAPMVWGTTYSVTTELLPANRPLFAALMRSLPIGLL
AILLTRVLPRRDWWWKAAVLGMLNIGSFFPLLFIAAERLPGGVAATLGAAQPLFVTGLAVVMLGERLSLLRLAWGVVGLV
GVGLVVLGPDVGFDPFGILAGLVGACAMGVGMTLTKRWGRPAGISPISFAAWQLAVGGLALLPATLLVEGLPSHVGISSA
AGYLWLGAIGGLLAYALWFRGIGRLPVTSAALLGLVSPLVAALMGMLLGERLNSIQVFGFVLALIAVVGGSARVRPIQTD
RIQQKATLNLVQPDKVPAENPARFRP
>Mature_345_residues
TRAKTRRVSAIAEDPVTPAGVTRVTVGDALRVSHQLALTAATAIAPMVWGTTYSVTTELLPANRPLFAALMRSLPIGLLA
ILLTRVLPRRDWWWKAAVLGMLNIGSFFPLLFIAAERLPGGVAATLGAAQPLFVTGLAVVMLGERLSLLRLAWGVVGLVG
VGLVVLGPDVGFDPFGILAGLVGACAMGVGMTLTKRWGRPAGISPISFAAWQLAVGGLALLPATLLVEGLPSHVGISSAA
GYLWLGAIGGLLAYALWFRGIGRLPVTSAALLGLVSPLVAALMGMLLGERLNSIQVFGFVLALIAVVGGSARVRPIQTDR
IQQKATLNLVQPDKVPAENPARFRP

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 36132; Mature: 36000

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAKTRRVSAIAEDPVTPAGVTRVTVGDALRVSHQLALTAATAIAPMVWGTTYSVTTEL
CCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LPANRPLFAALMRSLPIGLLAILLTRVLPRRDWWWKAAVLGMLNIGSFFPLLFIAAERLP
CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGVAATLGAAQPLFVTGLAVVMLGERLSLLRLAWGVVGLVGVGLVVLGPDVGFDPFGILA
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHH
GLVGACAMGVGMTLTKRWGRPAGISPISFAAWQLAVGGLALLPATLLVEGLPSHVGISSA
HHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AGYLWLGAIGGLLAYALWFRGIGRLPVTSAALLGLVSPLVAALMGMLLGERLNSIQVFGF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLALIAVVGGSARVRPIQTDRIQQKATLNLVQPDKVPAENPARFRP
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRAKTRRVSAIAEDPVTPAGVTRVTVGDALRVSHQLALTAATAIAPMVWGTTYSVTTEL
CCCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LPANRPLFAALMRSLPIGLLAILLTRVLPRRDWWWKAAVLGMLNIGSFFPLLFIAAERLP
CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGVAATLGAAQPLFVTGLAVVMLGERLSLLRLAWGVVGLVGVGLVVLGPDVGFDPFGILA
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHH
GLVGACAMGVGMTLTKRWGRPAGISPISFAAWQLAVGGLALLPATLLVEGLPSHVGISSA
HHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AGYLWLGAIGGLLAYALWFRGIGRLPVTSAALLGLVSPLVAALMGMLLGERLNSIQVFGF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLALIAVVGGSARVRPIQTDRIQQKATLNLVQPDKVPAENPARFRP
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]