| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386521
Identifier: 119386521
GI number: 119386521
Start: 953762
End: 954544
Strand: Direct
Name: 119386521
Synonym: Pden_3814
Alternate gene names: NA
Gene position: 953762-954544 (Clockwise)
Preceding gene: 119386518
Following gene: 119386522
Centisome position: 55.13
GC content: 72.92
Gene sequence:
>783_bases ATGCATCACGACGTATTCGAGCTGCGAAAATTCTATTATACCCGCGCCCTTGGCCGGGTGGTGCAGCGCGTGCTGCGCGA CCGGCTCACCGGGCTATGGCCGCCCGACCAGGCGCAGGGCATGACCGTTGCCGGCTACGGATTTGCCGCGCCGCTGCTGC GGCCCTGGCTGACGCGGGCGCGGCGGGTGATCTCGCTGATGCCGGGGCCGCAGGGGGTGATGGCCTGGCCGGCCGGGCTG CCGAATTGCTCGGTCCTGTGCGAAGAGACGGCCTGGCCGCTGGATACGGGCAGCGTCGACCGGCTGGTGCTGCTGCACGC ACTGGAGACGGCGGACCATCCGGCCGCGCTGATGGACGAGGCGTGGCGCGTCCTGGGACCGGGCGGGCGGCTGCTGGTGA TGGTGCCGAACCGGGCCGGGCTCTGGGCCCGATCCGAGACCACGCCCTTCGGCTTCGGCCGCAGCTATACCGCAGGCCAG TTGGAGGTGCAGGCCCGCGCGGCGGGCTTCGTGACCGAGCGCACGGGGGCAGCGCTCTACATCCCGCCCTCGGATCGGCG GTTCTGGCTGAAAAGCGCGCAGATGTGGGAACGCGCGGGGCTGCGCATCAGCCAGGTGCTGGTTGCCGGCGTGGTGCTGA CCGAGTTCAGCAAGCAGGTGCAGGCGCCGGTCGGGCCGGGGCGGCGCGTCAGCGTGCCGAGCCCGCTCGACGTGCTGGAG GGTATCGCCCGGCCGCGCCCGGCGGGGCAGGGCGCGGGGCGGACGGCGCGCGATCCGGGCTGA
Upstream 100 bases:
>100_bases AGGCATAGTTGTCGGTCAGGCAGCGGACGGGAACGAGTTCCAGCGGCATTGGCAAATTCCTTTCTTTGCCGCAGTCTGGC CTTGCGAGGCGGGAGGCGCA
Downstream 100 bases:
>100_bases GGCGCGAGGCCGGTCGCCCGCGGCGAATCCCCTCGCGTGGGGCGGCTGCGGCGAAATCTTTCCGCGCGCGAGCGGCCTGC CGGGCGAGGTGTTTGCGCAA
Product: methyltransferase type 11
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MHHDVFELRKFYYTRALGRVVQRVLRDRLTGLWPPDQAQGMTVAGYGFAAPLLRPWLTRARRVISLMPGPQGVMAWPAGL PNCSVLCEETAWPLDTGSVDRLVLLHALETADHPAALMDEAWRVLGPGGRLLVMVPNRAGLWARSETTPFGFGRSYTAGQ LEVQARAAGFVTERTGAALYIPPSDRRFWLKSAQMWERAGLRISQVLVAGVVLTEFSKQVQAPVGPGRRVSVPSPLDVLE GIARPRPAGQGAGRTARDPG
Sequences:
>Translated_260_residues MHHDVFELRKFYYTRALGRVVQRVLRDRLTGLWPPDQAQGMTVAGYGFAAPLLRPWLTRARRVISLMPGPQGVMAWPAGL PNCSVLCEETAWPLDTGSVDRLVLLHALETADHPAALMDEAWRVLGPGGRLLVMVPNRAGLWARSETTPFGFGRSYTAGQ LEVQARAAGFVTERTGAALYIPPSDRRFWLKSAQMWERAGLRISQVLVAGVVLTEFSKQVQAPVGPGRRVSVPSPLDVLE GIARPRPAGQGAGRTARDPG >Mature_260_residues MHHDVFELRKFYYTRALGRVVQRVLRDRLTGLWPPDQAQGMTVAGYGFAAPLLRPWLTRARRVISLMPGPQGVMAWPAGL PNCSVLCEETAWPLDTGSVDRLVLLHALETADHPAALMDEAWRVLGPGGRLLVMVPNRAGLWARSETTPFGFGRSYTAGQ LEVQARAAGFVTERTGAALYIPPSDRRFWLKSAQMWERAGLRISQVLVAGVVLTEFSKQVQAPVGPGRRVSVPSPLDVLE GIARPRPAGQGAGRTARDPG
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28437; Mature: 28437
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHDVFELRKFYYTRALGRVVQRVLRDRLTGLWPPDQAQGMTVAGYGFAAPLLRPWLTRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHH RRVISLMPGPQGVMAWPAGLPNCSVLCEETAWPLDTGSVDRLVLLHALETADHPAALMDE HHHHHHCCCCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH AWRVLGPGGRLLVMVPNRAGLWARSETTPFGFGRSYTAGQLEVQARAAGFVTERTGAALY HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCEEEECCCCEEE IPPSDRRFWLKSAQMWERAGLRISQVLVAGVVLTEFSKQVQAPVGPGRRVSVPSPLDVLE ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHH GIARPRPAGQGAGRTARDPG HHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHHDVFELRKFYYTRALGRVVQRVLRDRLTGLWPPDQAQGMTVAGYGFAAPLLRPWLTRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHH RRVISLMPGPQGVMAWPAGLPNCSVLCEETAWPLDTGSVDRLVLLHALETADHPAALMDE HHHHHHCCCCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH AWRVLGPGGRLLVMVPNRAGLWARSETTPFGFGRSYTAGQLEVQARAAGFVTERTGAALY HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCEEEECCCCEEE IPPSDRRFWLKSAQMWERAGLRISQVLVAGVVLTEFSKQVQAPVGPGRRVSVPSPLDVLE ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHH GIARPRPAGQGAGRTARDPG HHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6209404 [H]