| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386485
Identifier: 119386485
GI number: 119386485
Start: 914005
End: 916314
Strand: Direct
Name: 119386485
Synonym: Pden_3778
Alternate gene names: NA
Gene position: 914005-916314 (Clockwise)
Preceding gene: 119386484
Following gene: 119386486
Centisome position: 52.83
GC content: 65.93
Gene sequence:
>2310_bases ATGACGGTAGAGAGCGCGAAGAACAAGGCAGGCCCGTTCAACGTCACCGGGACGAGCGGGACGTTTCCGCGCAAGTTCCT TCTGCTCGACGAGGATCACCTGCGGGTCATCCGGGTTCGGGACGGGCAGGAAACCGACCTGACGACCGGCATCGGCCATA CCGGAATCGGGACCGCCGACGGCACGGTCGTCATCTCGGCAGGGATCGAGCCCGGCGACACGATCTATCTCCTGCGCGCC GTGCCGAACACCCAGAGGTCGGATTACAACGACCAGGGCAGGGTGCGCCCCGGGCAGGTGGAATCCGATCTGGATCTGGT GGTGATGCAGATCCAGGATGTTTCGGAGCGCGCGGAACGGTCGCTGACCCTGCCCGTGTCGTCCGAACTCGGGGGCGAGG CGGCGATGCAGGCCGCGCTGGACGCCCCGGGCTATGCGGCGCAGGCGCAGGCGGCGGCGGCCATGGCGCAGGCCTATGGG TTGGGCTTCCAGTCCCGCGAGGCGTTCCTTGCAGCGGCGCAGAGTGGCATCCTGAACCTGCTGCCGGACGGGACCGCGAT CCATGTCGTCGACCGGCTCTATATCCGCCGCGCGGGGTCGACGACCATTCCGGGCCTGCCGGGCTGGGATCATCCGCGCA CGGTTCACAAGTCGATCCTCACCGGCGACTGGCAGGCGCGGCTGGAATATCCTGCCGAAATCGACGCGGTGCTGGATGTG TTCGACGACATGCAGCGGTGGCATGGGGATGTCGATGACATCTGCCATGTCGGCGATATCGTCGAGCGGGCGACCCAGCA CAATACCGGCGACATCTCGGCGGTCTACAGCTACGACCGGCTGCTGCCGGCGCTGTGGGCGCGCACGGCGCTGCCGCGCG TCTATTTCATCCCGGGCAACCATGACAGCGACGGGGCGGGCCTGACCCAGCACCAATACGCCCGGTCCCAGCACACCTAT ATGGATTACATCGGGCGGCGCTTCTTCACCGTTCGGATGGGCAACCTGCTGCGCGTGTTCATGGGCACCATGGCCGGCGA CGGCGGCGGCAACATCCACACGACGACGCTTTACTGGTTCGACCAGATATTGCAGCGCAATGCCGGCTGCAACATCGAGG TCTATCTGCACCAGCCACTCTATGGCTATGCCGATTACGTCGAGGACTCGGCAGCGGTCCAATACAAGAGCGTCTGCGAC CGGATCGTCACCTCGCTCGAACGCGTCGACAACGTGGCCTTCGTGTGCAGCGGCCATATCGCGCGGCCCGAGGATCTGCC GAACTATTACGACGCCTATGGCACCCGCATGTTCAGCGTGAACATGCATATCCCTCGCATGACCGAAACCGGAGCCCCCG CGGCGCGGCCCTATGGCGTGATCGAATATCGCCGGGGCTCGAATTCCGCGATCGTGCGCATGTGGAACGCCGCGACGCAT AGCTGGCTGGCCGGGCGCGATGTGCCGATTACCTACAAATACCCGCTGGACCTCGGCGCGGGCGTTCCCGACTTCGATGG GCGCTATGCGGCGCAGGCGTCCTGGCCAAGTTTCGACGGCGTTCTGCAAATCCAGCGCGATATCAGGGAAAACAGCCACA ACGCGGGAACGCCCGAGGCGCCGAACTGGACATCGGACCAGGGGTTCAGGCCCGGCCTGCGCATGGTGCTGATGGAGCTC GGGCCGGATGATGCCAAGGCGGGCGACGGGCTCAGTATCGATTGGTGGGTGCCGGCCTCGGCAACCGTGCCGGATGCAAC CGATGCGCACAACGACATTGCGGGCAACTATCTCGCCGGGCGCGGGGGCGTGCGTCGCGAGGTCGGGCTGGACGGCAACC CGACAGGTGAGCTTGCGTTCCAGCTCGGCACCACGGGGCTGGTATCTGGCCTGCGGGACGTGCTCACCGTGCGCGGATCG GACGGCCGCGCGTTCGCCCCCGAAAGCTTCATCGGCAACGCCCTGCCGGAGCTGGGCCTGCTGGCGGCGCTCGGCCTGGA CAATACCCTGTTCGACAAGGGGTTCATCGGCGAAAACGGCAACGTCAACACCCTGGGCGAACCCGGGATCTATCGTATCG CGTCTGGCGCGGTTGCGGCCACCATCACCGGGCTGCCCTATACCGGATCGGGCGGCATCTTCATCGTTCTGAACCCCGCC GCGGTGCCTTCCAGCCGGCCGGTAGCCGTTGCCAACCAGATCCAGATCTGGATCGCCCGCGCGGTCGGTGACGGCGGGCT CATCTACTACCGGGTCTGCAACAGCGGATCGTGGGTGAGCTGGCGGCTCATCTCGACCACCGTCGTGTGA
Upstream 100 bases:
>100_bases TCTGATGGGCCGCAATCCCCTGATCGACTGACGCCCGCCAACATATATCGCCCGACTTCTGGTTCCTACCCTTCGCCTGA CCCCATGCAGGCAGGCGAAG
Downstream 100 bases:
>100_bases GGGGCGGCCATGGCCCAGATCGATAACCGCGTGAGCCTCGGCAACATCATATCGCTCGGCGCCACCCTGTTGACCGGCGC CGGCATGGCGGCCGCGCTGT
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MTVESAKNKAGPFNVTGTSGTFPRKFLLLDEDHLRVIRVRDGQETDLTTGIGHTGIGTADGTVVISAGIEPGDTIYLLRA VPNTQRSDYNDQGRVRPGQVESDLDLVVMQIQDVSERAERSLTLPVSSELGGEAAMQAALDAPGYAAQAQAAAAMAQAYG LGFQSREAFLAAAQSGILNLLPDGTAIHVVDRLYIRRAGSTTIPGLPGWDHPRTVHKSILTGDWQARLEYPAEIDAVLDV FDDMQRWHGDVDDICHVGDIVERATQHNTGDISAVYSYDRLLPALWARTALPRVYFIPGNHDSDGAGLTQHQYARSQHTY MDYIGRRFFTVRMGNLLRVFMGTMAGDGGGNIHTTTLYWFDQILQRNAGCNIEVYLHQPLYGYADYVEDSAAVQYKSVCD RIVTSLERVDNVAFVCSGHIARPEDLPNYYDAYGTRMFSVNMHIPRMTETGAPAARPYGVIEYRRGSNSAIVRMWNAATH SWLAGRDVPITYKYPLDLGAGVPDFDGRYAAQASWPSFDGVLQIQRDIRENSHNAGTPEAPNWTSDQGFRPGLRMVLMEL GPDDAKAGDGLSIDWWVPASATVPDATDAHNDIAGNYLAGRGGVRREVGLDGNPTGELAFQLGTTGLVSGLRDVLTVRGS DGRAFAPESFIGNALPELGLLAALGLDNTLFDKGFIGENGNVNTLGEPGIYRIASGAVAATITGLPYTGSGGIFIVLNPA AVPSSRPVAVANQIQIWIARAVGDGGLIYYRVCNSGSWVSWRLISTTVV
Sequences:
>Translated_769_residues MTVESAKNKAGPFNVTGTSGTFPRKFLLLDEDHLRVIRVRDGQETDLTTGIGHTGIGTADGTVVISAGIEPGDTIYLLRA VPNTQRSDYNDQGRVRPGQVESDLDLVVMQIQDVSERAERSLTLPVSSELGGEAAMQAALDAPGYAAQAQAAAAMAQAYG LGFQSREAFLAAAQSGILNLLPDGTAIHVVDRLYIRRAGSTTIPGLPGWDHPRTVHKSILTGDWQARLEYPAEIDAVLDV FDDMQRWHGDVDDICHVGDIVERATQHNTGDISAVYSYDRLLPALWARTALPRVYFIPGNHDSDGAGLTQHQYARSQHTY MDYIGRRFFTVRMGNLLRVFMGTMAGDGGGNIHTTTLYWFDQILQRNAGCNIEVYLHQPLYGYADYVEDSAAVQYKSVCD RIVTSLERVDNVAFVCSGHIARPEDLPNYYDAYGTRMFSVNMHIPRMTETGAPAARPYGVIEYRRGSNSAIVRMWNAATH SWLAGRDVPITYKYPLDLGAGVPDFDGRYAAQASWPSFDGVLQIQRDIRENSHNAGTPEAPNWTSDQGFRPGLRMVLMEL GPDDAKAGDGLSIDWWVPASATVPDATDAHNDIAGNYLAGRGGVRREVGLDGNPTGELAFQLGTTGLVSGLRDVLTVRGS DGRAFAPESFIGNALPELGLLAALGLDNTLFDKGFIGENGNVNTLGEPGIYRIASGAVAATITGLPYTGSGGIFIVLNPA AVPSSRPVAVANQIQIWIARAVGDGGLIYYRVCNSGSWVSWRLISTTVV >Mature_768_residues TVESAKNKAGPFNVTGTSGTFPRKFLLLDEDHLRVIRVRDGQETDLTTGIGHTGIGTADGTVVISAGIEPGDTIYLLRAV PNTQRSDYNDQGRVRPGQVESDLDLVVMQIQDVSERAERSLTLPVSSELGGEAAMQAALDAPGYAAQAQAAAAMAQAYGL GFQSREAFLAAAQSGILNLLPDGTAIHVVDRLYIRRAGSTTIPGLPGWDHPRTVHKSILTGDWQARLEYPAEIDAVLDVF DDMQRWHGDVDDICHVGDIVERATQHNTGDISAVYSYDRLLPALWARTALPRVYFIPGNHDSDGAGLTQHQYARSQHTYM DYIGRRFFTVRMGNLLRVFMGTMAGDGGGNIHTTTLYWFDQILQRNAGCNIEVYLHQPLYGYADYVEDSAAVQYKSVCDR IVTSLERVDNVAFVCSGHIARPEDLPNYYDAYGTRMFSVNMHIPRMTETGAPAARPYGVIEYRRGSNSAIVRMWNAATHS WLAGRDVPITYKYPLDLGAGVPDFDGRYAAQASWPSFDGVLQIQRDIRENSHNAGTPEAPNWTSDQGFRPGLRMVLMELG PDDAKAGDGLSIDWWVPASATVPDATDAHNDIAGNYLAGRGGVRREVGLDGNPTGELAFQLGTTGLVSGLRDVLTVRGSD GRAFAPESFIGNALPELGLLAALGLDNTLFDKGFIGENGNVNTLGEPGIYRIASGAVAATITGLPYTGSGGIFIVLNPAA VPSSRPVAVANQIQIWIARAVGDGGLIYYRVCNSGSWVSWRLISTTVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83185; Mature: 83054
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVESAKNKAGPFNVTGTSGTFPRKFLLLDEDHLRVIRVRDGQETDLTTGIGHTGIGTAD CCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC GTVVISAGIEPGDTIYLLRAVPNTQRSDYNDQGRVRPGQVESDLDLVVMQIQDVSERAER CEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHC SLTLPVSSELGGEAAMQAALDAPGYAAQAQAAAAMAQAYGLGFQSREAFLAAAQSGILNL EEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEE LPDGTAIHVVDRLYIRRAGSTTIPGLPGWDHPRTVHKSILTGDWQARLEYPAEIDAVLDV CCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHH FDDMQRWHGDVDDICHVGDIVERATQHNTGDISAVYSYDRLLPALWARTALPRVYFIPGN HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCEEEEECCC HDSDGAGLTQHQYARSQHTYMDYIGRRFFTVRMGNLLRVFMGTMAGDGGGNIHTTTLYWF CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCCEEEEHHHHH DQILQRNAGCNIEVYLHQPLYGYADYVEDSAAVQYKSVCDRIVTSLERVDNVAFVCSGHI HHHHHCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC ARPEDLPNYYDAYGTRMFSVNMHIPRMTETGAPAARPYGVIEYRRGSNSAIVRMWNAATH CCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCC SWLAGRDVPITYKYPLDLGAGVPDFDGRYAAQASWPSFDGVLQIQRDIRENSHNAGTPEA CCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC PNWTSDQGFRPGLRMVLMELGPDDAKAGDGLSIDWWVPASATVPDATDAHNDIAGNYLAG CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEC RGGVRREVGLDGNPTGELAFQLGTTGLVSGLRDVLTVRGSDGRAFAPESFIGNALPELGL CCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHEEECCCCCEECCHHHHHHCCHHHHH LAALGLDNTLFDKGFIGENGNVNTLGEPGIYRIASGAVAATITGLPYTGSGGIFIVLNPA HHHHCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEECCCCEEEEECCC AVPSSRPVAVANQIQIWIARAVGDGGLIYYRVCNSGSWVSWRLISTTVV CCCCCCCEEEECCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECC >Mature Secondary Structure TVESAKNKAGPFNVTGTSGTFPRKFLLLDEDHLRVIRVRDGQETDLTTGIGHTGIGTAD CCCCCCCCCCCEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC GTVVISAGIEPGDTIYLLRAVPNTQRSDYNDQGRVRPGQVESDLDLVVMQIQDVSERAER CEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHC SLTLPVSSELGGEAAMQAALDAPGYAAQAQAAAAMAQAYGLGFQSREAFLAAAQSGILNL EEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEE LPDGTAIHVVDRLYIRRAGSTTIPGLPGWDHPRTVHKSILTGDWQARLEYPAEIDAVLDV CCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHH FDDMQRWHGDVDDICHVGDIVERATQHNTGDISAVYSYDRLLPALWARTALPRVYFIPGN HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCEEEEECCC HDSDGAGLTQHQYARSQHTYMDYIGRRFFTVRMGNLLRVFMGTMAGDGGGNIHTTTLYWF CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCCEEEEHHHHH DQILQRNAGCNIEVYLHQPLYGYADYVEDSAAVQYKSVCDRIVTSLERVDNVAFVCSGHI HHHHHCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC ARPEDLPNYYDAYGTRMFSVNMHIPRMTETGAPAARPYGVIEYRRGSNSAIVRMWNAATH CCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCC SWLAGRDVPITYKYPLDLGAGVPDFDGRYAAQASWPSFDGVLQIQRDIRENSHNAGTPEA CCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC PNWTSDQGFRPGLRMVLMELGPDDAKAGDGLSIDWWVPASATVPDATDAHNDIAGNYLAG CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEC RGGVRREVGLDGNPTGELAFQLGTTGLVSGLRDVLTVRGSDGRAFAPESFIGNALPELGL CCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHEEECCCCCEECCHHHHHHCCHHHHH LAALGLDNTLFDKGFIGENGNVNTLGEPGIYRIASGAVAATITGLPYTGSGGIFIVLNPA HHHHCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEECCCCEEEEECCC AVPSSRPVAVANQIQIWIARAVGDGGLIYYRVCNSGSWVSWRLISTTVV CCCCCCCEEEECCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA