The gene/protein map for NC_008687 is currently unavailable.
Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386482

Identifier: 119386482

GI number: 119386482

Start: 912308

End: 913123

Strand: Direct

Name: 119386482

Synonym: Pden_3775

Alternate gene names: NA

Gene position: 912308-913123 (Clockwise)

Preceding gene: 119386478

Following gene: 119386483

Centisome position: 52.73

GC content: 61.76

Gene sequence:

>816_bases
ATGAATATGGAGCAAAGCACGCCGAAAGGCAACGTCCCTGTCGCCGCCCTCGCCTCGGGCGAGCCGCTGACCATGAGCAG
CCGCGAGATCGCGGAACTGGTCGAAAGCCGCCACGACAAGGTGAAACAGTCGATGGAGAGGCTGTCCGAGCGCGGTATCA
TCACTTTTACCCCAATGGGGGAAAAGTCCTCGGGCGGGCGTCCCGGCACGATTTACCAAGTAAACAAGCGTGACAGCTTT
GTAGTCGTCGCCCAGCTCTGCCCCGAGTTCACCGCTCGCCTGGTGGACCGCTGGCAGGAGCTGGAACAGGAGAAGGCCAG
CGGCGGCTTCGCCCTGCCGCAGACCTACGAGCAGGCACTTGAGGGCTTGCTCGCTAAGGTCCGCGAGAACGGCGCCTTGC
AGATCGAAAATCGCGCGAAGGACGCGGCCATCAGCGCCATGCAGCCGAAGGTGGACGCCTACGAGGCGTATCTGTCCGAG
GAGGGCGTCTGCCGGATCACGGATTTCTGCAACAAGCACGGCGTCAAGGTGAACCGTCCCGGCTGGATTCTGCGCGACAG
GGGGCTGATGCACCACAAGAAGGTGCTGGCGACCCAGATCGGCCTGAAATCAGGCATTCTCAAGAACGTGCTGGAAAAGG
ACGGCTTCGAATACATCGACAGCAAGGGGCAATCGGTAGAGGCGCAGCAAGCCATGATCGTGCGGCAGCGCGAGGTCTCG
CTGCTCAAGATGATCGTGGACGCCTATGGACTGACCGCGTTCCGCAACTCTGTCGCGTTCGACCGGGCCAAGGCACTGAT
CGGGAGCGGGAAATGA

Upstream 100 bases:

>100_bases
GGAGGCAGACGATGCCAAGGCTTGAAACGAGAACGGCCGGGCAGGGCGGCAACCCTGACACCGGCCAGATGAACCCCCGC
TGTGGAGAAGGAATTCGCCT

Downstream 100 bases:

>100_bases
GCAAGGAAGTCACCCCCGCCCAGCATCTCGCCGCGATTGCGGGTCTGGCGCTTACCAGTAATCGCGCCATGCCGAAGGGC
GACCTGATGCAGTTCATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNMEQSTPKGNVPVAALASGEPLTMSSREIAELVESRHDKVKQSMERLSERGIITFTPMGEKSSGGRPGTIYQVNKRDSF
VVVAQLCPEFTARLVDRWQELEQEKASGGFALPQTYEQALEGLLAKVRENGALQIENRAKDAAISAMQPKVDAYEAYLSE
EGVCRITDFCNKHGVKVNRPGWILRDRGLMHHKKVLATQIGLKSGILKNVLEKDGFEYIDSKGQSVEAQQAMIVRQREVS
LLKMIVDAYGLTAFRNSVAFDRAKALIGSGK

Sequences:

>Translated_271_residues
MNMEQSTPKGNVPVAALASGEPLTMSSREIAELVESRHDKVKQSMERLSERGIITFTPMGEKSSGGRPGTIYQVNKRDSF
VVVAQLCPEFTARLVDRWQELEQEKASGGFALPQTYEQALEGLLAKVRENGALQIENRAKDAAISAMQPKVDAYEAYLSE
EGVCRITDFCNKHGVKVNRPGWILRDRGLMHHKKVLATQIGLKSGILKNVLEKDGFEYIDSKGQSVEAQQAMIVRQREVS
LLKMIVDAYGLTAFRNSVAFDRAKALIGSGK
>Mature_271_residues
MNMEQSTPKGNVPVAALASGEPLTMSSREIAELVESRHDKVKQSMERLSERGIITFTPMGEKSSGGRPGTIYQVNKRDSF
VVVAQLCPEFTARLVDRWQELEQEKASGGFALPQTYEQALEGLLAKVRENGALQIENRAKDAAISAMQPKVDAYEAYLSE
EGVCRITDFCNKHGVKVNRPGWILRDRGLMHHKKVLATQIGLKSGILKNVLEKDGFEYIDSKGQSVEAQQAMIVRQREVS
LLKMIVDAYGLTAFRNSVAFDRAKALIGSGK

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29986; Mature: 29986

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMEQSTPKGNVPVAALASGEPLTMSSREIAELVESRHDKVKQSMERLSERGIITFTPMG
CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
EKSSGGRPGTIYQVNKRDSFVVVAQLCPEFTARLVDRWQELEQEKASGGFALPQTYEQAL
CCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
EGLLAKVRENGALQIENRAKDAAISAMQPKVDAYEAYLSEEGVCRITDFCNKHGVKVNRP
HHHHHHHHCCCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCEEHHHHHHHCCCEECCC
GWILRDRGLMHHKKVLATQIGLKSGILKNVLEKDGFEYIDSKGQSVEAQQAMIVRQREVS
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
LLKMIVDAYGLTAFRNSVAFDRAKALIGSGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNMEQSTPKGNVPVAALASGEPLTMSSREIAELVESRHDKVKQSMERLSERGIITFTPMG
CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
EKSSGGRPGTIYQVNKRDSFVVVAQLCPEFTARLVDRWQELEQEKASGGFALPQTYEQAL
CCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
EGLLAKVRENGALQIENRAKDAAISAMQPKVDAYEAYLSEEGVCRITDFCNKHGVKVNRP
HHHHHHHHCCCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCEEHHHHHHHCCCEECCC
GWILRDRGLMHHKKVLATQIGLKSGILKNVLEKDGFEYIDSKGQSVEAQQAMIVRQREVS
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
LLKMIVDAYGLTAFRNSVAFDRAKALIGSGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA