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The map label for this gene is 119386463

Identifier: 119386463

GI number: 119386463

Start: 891208

End: 892533

Strand: Direct

Name: 119386463

Synonym: Pden_3756

Alternate gene names: NA

Gene position: 891208-892533 (Clockwise)

Preceding gene: 119386462

Following gene: 119386464

Centisome position: 51.51

GC content: 66.89

Gene sequence:

>1326_bases
ATGATCCTCGACGTTCGCCCGCCCAAGGTCTTTGCCCCGCTCTGGAAGTCGAAGCGGCGGTATCTGTGCGCCTGGGGCGG
GCGCGGGTCGGGCAAGTCGTGGGACCGGGCCATGCACATGATCGTGCGCCACCTGACGGAGCCCGGCCTTTCGTCGATCT
GCCTGCGAGACGTGCAAAAATCCCTCGACCAGTCGGTATTCAAACTGCTGGTCGAGACTGCGGCCCGGCTCGGGGTGGCG
GAGGCGATCAGGCCGGTGGAATCTGATCGGATCATCAGGACGCCGGGTAACGGCATCATTGCCTTCAACGGCATGAACGA
GTTCAACGCCGAGAACATCAAGTCGCTTGAGGGCTTCGACATCGCGTGGTGGGAGGAGGCCGCGACCGCCGGGCAGGGGC
CGCTCGACATGCTGCGCCCGACGCTGCGCAAGCCGGGGTCGCAGATCTGGTTCACCTACAACCCCCGCCTGCGCTCCGAC
CCGGTCGACGTGATGATGCGCCAGGACGCGCGCTTTGCGGACAGCCGCACGGTCGTCGAGGCCAACTGGCGCGACAACCC
GTTCCGCGGTCCCGAGCTGGAGGAGGAACGGCTGCTCGACCTGGCCGGCGACGAGGCCCGCTATCGCCATATCTGGGAAG
GCGATTACGAGGCCGAGTCGGACATGCAGTTCATCGGCGGCGGTCTGGTGCGCGAGGCCATGGCCCGCCAGCCGTTCTCG
CAGATCGGCGACGAGCTGGTGCTGGGCGTGGACGTGGCGCGATTCGGCGATGACCGCAGCGTGATCTGGGCACGGCGGGG
CAGGGACGCCCAGACCGAGCTGCCGATCATCATGAAGGGCGCCGACACCATGGCGGTGGCCGCGCGCGTCATGGCCGAGA
TTGACCGCCTGCACCCGGATGGCGTGTTCATCGACGAGGGCGGTGTGGGTGGCGGCGTGATCGACCGCTGCCGGCAGATG
GGCTATTCCGTGGTCGGCGTGAACTTCGGCGGCAAGGCGGATCGCGCCATTGAGGGCGTGCCGAAATGCCGGAACAAGCG
CGCGCAGATGTGGGCCACCATGCGCGAATGGCTGCGCTCGGGCGGATGCATCCCCGACAGTCGCGACCTTGAGATGGATC
TGACCGGGCCGCTCTACAGCTTCGACGTGAACAACGCGATTGAGATCGAGAAGAAATCCGACATGAAGAAGCGCGGCGTC
TCCAGCCCCGACGAAGCCGACGCGCTGGCGCTGACCTTCGCCTATCCCGTGGTGCCGCGCTCAATCCAGCGCCAGCAGGA
AGCGCGGGCGCAAGAGGATTGGCACCCGGTCTGGGGCAGCCAGTAG

Upstream 100 bases:

>100_bases
ACGCGCGCGACGCAAAGCGATACGAGCGGATGCAGCGGCGCCTGTTCGCGGCCGGCGCGCTGCTGTCCATGTGGCTGGGC
TATCTCGTCTGGGCCGCTGC

Downstream 100 bases:

>100_bases
CCAACATATATCGCTCAGCGCGCCGTCCATATCCTGCCCCCGAACAATGACGGGCGGGCCATGGCGACGACGCACAATTT
CACGGTGGGCAATTCCTGGA

Product: PBSX family phage terminase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MILDVRPPKVFAPLWKSKRRYLCAWGGRGSGKSWDRAMHMIVRHLTEPGLSSICLRDVQKSLDQSVFKLLVETAARLGVA
EAIRPVESDRIIRTPGNGIIAFNGMNEFNAENIKSLEGFDIAWWEEAATAGQGPLDMLRPTLRKPGSQIWFTYNPRLRSD
PVDVMMRQDARFADSRTVVEANWRDNPFRGPELEEERLLDLAGDEARYRHIWEGDYEAESDMQFIGGGLVREAMARQPFS
QIGDELVLGVDVARFGDDRSVIWARRGRDAQTELPIIMKGADTMAVAARVMAEIDRLHPDGVFIDEGGVGGGVIDRCRQM
GYSVVGVNFGGKADRAIEGVPKCRNKRAQMWATMREWLRSGGCIPDSRDLEMDLTGPLYSFDVNNAIEIEKKSDMKKRGV
SSPDEADALALTFAYPVVPRSIQRQQEARAQEDWHPVWGSQ

Sequences:

>Translated_441_residues
MILDVRPPKVFAPLWKSKRRYLCAWGGRGSGKSWDRAMHMIVRHLTEPGLSSICLRDVQKSLDQSVFKLLVETAARLGVA
EAIRPVESDRIIRTPGNGIIAFNGMNEFNAENIKSLEGFDIAWWEEAATAGQGPLDMLRPTLRKPGSQIWFTYNPRLRSD
PVDVMMRQDARFADSRTVVEANWRDNPFRGPELEEERLLDLAGDEARYRHIWEGDYEAESDMQFIGGGLVREAMARQPFS
QIGDELVLGVDVARFGDDRSVIWARRGRDAQTELPIIMKGADTMAVAARVMAEIDRLHPDGVFIDEGGVGGGVIDRCRQM
GYSVVGVNFGGKADRAIEGVPKCRNKRAQMWATMREWLRSGGCIPDSRDLEMDLTGPLYSFDVNNAIEIEKKSDMKKRGV
SSPDEADALALTFAYPVVPRSIQRQQEARAQEDWHPVWGSQ
>Mature_441_residues
MILDVRPPKVFAPLWKSKRRYLCAWGGRGSGKSWDRAMHMIVRHLTEPGLSSICLRDVQKSLDQSVFKLLVETAARLGVA
EAIRPVESDRIIRTPGNGIIAFNGMNEFNAENIKSLEGFDIAWWEEAATAGQGPLDMLRPTLRKPGSQIWFTYNPRLRSD
PVDVMMRQDARFADSRTVVEANWRDNPFRGPELEEERLLDLAGDEARYRHIWEGDYEAESDMQFIGGGLVREAMARQPFS
QIGDELVLGVDVARFGDDRSVIWARRGRDAQTELPIIMKGADTMAVAARVMAEIDRLHPDGVFIDEGGVGGGVIDRCRQM
GYSVVGVNFGGKADRAIEGVPKCRNKRAQMWATMREWLRSGGCIPDSRDLEMDLTGPLYSFDVNNAIEIEKKSDMKKRGV
SSPDEADALALTFAYPVVPRSIQRQQEARAQEDWHPVWGSQ

Specific function: Unknown

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 49553; Mature: 49553

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDVRPPKVFAPLWKSKRRYLCAWGGRGSGKSWDRAMHMIVRHLTEPGLSSICLRDVQK
CEECCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SLDQSVFKLLVETAARLGVAEAIRPVESDRIIRTPGNGIIAFNGMNEFNAENIKSLEGFD
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEECCCCCEEEECCCCCCCHHHHHHCCCCC
IAWWEEAATAGQGPLDMLRPTLRKPGSQIWFTYNPRLRSDPVDVMMRQDARFADSRTVVE
EEHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEE
ANWRDNPFRGPELEEERLLDLAGDEARYRHIWEGDYEAESDMQFIGGGLVREAMARQPFS
ECCCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
QIGDELVLGVDVARFGDDRSVIWARRGRDAQTELPIIMKGADTMAVAARVMAEIDRLHPD
HCCHHEEEEEHHHHCCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCC
GVFIDEGGVGGGVIDRCRQMGYSVVGVNFGGKADRAIEGVPKCRNKRAQMWATMREWLRS
CEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHC
GGCIPDSRDLEMDLTGPLYSFDVNNAIEIEKKSDMKKRGVSSPDEADALALTFAYPVVPR
CCCCCCCCCCEEECCCCEEEECCCCEEEECCHHHHHHCCCCCCCCCCEEEEEEHHHHCCH
SIQRQQEARAQEDWHPVWGSQ
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MILDVRPPKVFAPLWKSKRRYLCAWGGRGSGKSWDRAMHMIVRHLTEPGLSSICLRDVQK
CEECCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SLDQSVFKLLVETAARLGVAEAIRPVESDRIIRTPGNGIIAFNGMNEFNAENIKSLEGFD
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEECCCCCEEEECCCCCCCHHHHHHCCCCC
IAWWEEAATAGQGPLDMLRPTLRKPGSQIWFTYNPRLRSDPVDVMMRQDARFADSRTVVE
EEHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEE
ANWRDNPFRGPELEEERLLDLAGDEARYRHIWEGDYEAESDMQFIGGGLVREAMARQPFS
ECCCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
QIGDELVLGVDVARFGDDRSVIWARRGRDAQTELPIIMKGADTMAVAARVMAEIDRLHPD
HCCHHEEEEEHHHHCCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCC
GVFIDEGGVGGGVIDRCRQMGYSVVGVNFGGKADRAIEGVPKCRNKRAQMWATMREWLRS
CEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHC
GGCIPDSRDLEMDLTGPLYSFDVNNAIEIEKKSDMKKRGVSSPDEADALALTFAYPVVPR
CCCCCCCCCCEEECCCCEEEECCCCEEEECCHHHHHHCCCCCCCCCCEEEEEEHHHHCCH
SIQRQQEARAQEDWHPVWGSQ
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]