| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is 119386457
Identifier: 119386457
GI number: 119386457
Start: 886882
End: 887592
Strand: Direct
Name: 119386457
Synonym: Pden_3749
Alternate gene names: NA
Gene position: 886882-887592 (Clockwise)
Preceding gene: 119386456
Following gene: 119386458
Centisome position: 51.26
GC content: 66.67
Gene sequence:
>711_bases ATGCGGGTGCTGATCGCCTGTGAATGCAGCGGGATCGTCCGCCGCGCCTTTGCCGCCCTCGGCCATGATGCATGGTCCTG CGACCTGATGCCGGCCGAGGATCGCAGTAACCGCCACATCGTCGGCGACGTGCGTGACCTGCTGCATGAAGGCTGGGATC TGCTGGCGGTGATGCATCCGCCCTGCACCCGGCTGGCGAATAGCGGTGTCCGCTGGCTCAAGGAGCCGCCTACAAACGCC CCGGATGAGGCGACGGAAGCAGAGAAGTCCGCATGGTCGGTTCTGGGTCGCGATGCCCGGCTGGCCATCATGTGGCGGCT GCTGGATGAGGGCGCCGCGCTGTTCTCGGACTGCTGGAATGCTCCGATCCCGCGCATCGCCGTGGAAAACCCGGTCATGC ACAAGCACGCCAAAGCGCGCATTCGCGGCTATGAGCCGTTCGCGCAGAGCGTCCAGCCGTGGCAGTTCGGGACCGACGAA GCAGGACCGGACAACGTGAAAAAGCGCACCTGCCTGTGGTTGCGCGGCCTGCCCAAGCTCAAGCCGACCGGCACACTGGA CGGCAGCACGGCGCGGGACGAAATCCACCGCGCGGCGCCGGGGCCGAACAGGAAATCGGATCGGTCGCGGTTCTTCCCCG GCCTCGCTGCCGCAATGGCATCGCAATGGGGCGGGTTCGCGGATGAAGTGACCGGAAGGGCCACGGCATGA
Upstream 100 bases:
>100_bases TGATCGGCATCCTGCAAAGGCAGGGCTATTCGCTGGCCGACATCGCCGAAGCGCTCAACATCACCGTGGAGCGGGCGCTG GTGCTGATGGAGGCGGCGTG
Downstream 100 bases:
>100_bases CCCTGACCGCCTCCGTCCGCGTCGAGGATGGCCATGCCGTCATCCGCATCCCCTTGGCCGAGGTTCACGGCCTGCGCGTC GCGCTCGCGGAATGCCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MRVLIACECSGIVRRAFAALGHDAWSCDLMPAEDRSNRHIVGDVRDLLHEGWDLLAVMHPPCTRLANSGVRWLKEPPTNA PDEATEAEKSAWSVLGRDARLAIMWRLLDEGAALFSDCWNAPIPRIAVENPVMHKHAKARIRGYEPFAQSVQPWQFGTDE AGPDNVKKRTCLWLRGLPKLKPTGTLDGSTARDEIHRAAPGPNRKSDRSRFFPGLAAAMASQWGGFADEVTGRATA
Sequences:
>Translated_236_residues MRVLIACECSGIVRRAFAALGHDAWSCDLMPAEDRSNRHIVGDVRDLLHEGWDLLAVMHPPCTRLANSGVRWLKEPPTNA PDEATEAEKSAWSVLGRDARLAIMWRLLDEGAALFSDCWNAPIPRIAVENPVMHKHAKARIRGYEPFAQSVQPWQFGTDE AGPDNVKKRTCLWLRGLPKLKPTGTLDGSTARDEIHRAAPGPNRKSDRSRFFPGLAAAMASQWGGFADEVTGRATA >Mature_236_residues MRVLIACECSGIVRRAFAALGHDAWSCDLMPAEDRSNRHIVGDVRDLLHEGWDLLAVMHPPCTRLANSGVRWLKEPPTNA PDEATEAEKSAWSVLGRDARLAIMWRLLDEGAALFSDCWNAPIPRIAVENPVMHKHAKARIRGYEPFAQSVQPWQFGTDE AGPDNVKKRTCLWLRGLPKLKPTGTLDGSTARDEIHRAAPGPNRKSDRSRFFPGLAAAMASQWGGFADEVTGRATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26041; Mature: 26041
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLIACECSGIVRRAFAALGHDAWSCDLMPAEDRSNRHIVGDVRDLLHEGWDLLAVMHP CEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEECCC PCTRLANSGVRWLKEPPTNAPDEATEAEKSAWSVLGRDARLAIMWRLLDEGAALFSDCWN CHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC APIPRIAVENPVMHKHAKARIRGYEPFAQSVQPWQFGTDEAGPDNVKKRTCLWLRGLPKL CCCCCEECCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC KPTGTLDGSTARDEIHRAAPGPNRKSDRSRFFPGLAAAMASQWGGFADEVTGRATA CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHCCCCHHHCCCCCCC >Mature Secondary Structure MRVLIACECSGIVRRAFAALGHDAWSCDLMPAEDRSNRHIVGDVRDLLHEGWDLLAVMHP CEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEECCC PCTRLANSGVRWLKEPPTNAPDEATEAEKSAWSVLGRDARLAIMWRLLDEGAALFSDCWN CHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC APIPRIAVENPVMHKHAKARIRGYEPFAQSVQPWQFGTDEAGPDNVKKRTCLWLRGLPKL CCCCCEECCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC KPTGTLDGSTARDEIHRAAPGPNRKSDRSRFFPGLAAAMASQWGGFADEVTGRATA CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA