| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386381
Identifier: 119386381
GI number: 119386381
Start: 822864
End: 823505
Strand: Direct
Name: 119386381
Synonym: Pden_3673
Alternate gene names: NA
Gene position: 822864-823505 (Clockwise)
Preceding gene: 119386379
Following gene: 119386384
Centisome position: 47.56
GC content: 66.98
Gene sequence:
>642_bases ATGACCGAAACCTTCTTCGAGACCCTGCGCGGCGAATGCGCGACCGATTGGTCCGCCGCCGTGAACCATCGCTTCGTGCG AGAGCTTTGCGACGGCAGCATCGCGGATGCGGCGATGGCGCGCTATCTGGTGCAGGACCACCGCTTTCTCGATGCCTTCC TGACGCTTTTGGGTGCGGCCATCGCCTCGGCCGACCGTTTCGAATCGCGGCTGCGTTTCGGGCGCTTCGCCGGCATGGTC TCGGGCGAGGAGAACGACTATTTCCTGCGCGCCTTTGCCGCGCTTGGCGTCAGCGCGGCGGATCGCGCCGCCATTCCCGA CAGCGCCCCTACCGCGGGCTTTCAGGCGCTGATGCGCGAGGCGGCGGCGACGCGCGCCTATCCGGCCGTTCTGGCGGTGC TGAACGTGGCCGAGGGGCTTTACCTCGACTGGGCCATGCGCGCGTCCCGGCCGCTGCCGGAGAACTTCGTCCATGCCGAA TGGATCACGCTGCACGACAATCCCTTCTTCCGCGATTTCGTGGGCTTCCTGCGGGACGAGTTCGACCGCGTCGGGCCCGA GGCGGCGGATCAGGCGCGGGACTTCTTCAGCCGTGCCGTCCGGCTTGAGCGGGAATTTTTCGATGATGCCTACGCGGGCT AG
Upstream 100 bases:
>100_bases ATCATGCCGGCGGAGGAATGGGACAGATGCACCTGCCTTTTGCCGGCCTCACCGCGAGGCCGCCCGCACCGACGGTCTCG CCCCAAGCCATGAGGGCATG
Downstream 100 bases:
>100_bases CGATCAATCCTCGATGATTTCCACATCGGGCGGGCTGCCGGGCGGTCCGCTTTCCCGATAATCCAGTACGATGCGCAAAA GCCCGGCCGGAGCCAGCCGC
Product: TenA family transcription regulator
Products: NA
Alternate protein names: Transcriptional Regulator; TENA/THI-4 Family Protein; TenA Family Transcriptional Activator; TENA/THI-4 Family; Transcriptional Activator TenA Family; Transcription Regulator; Transcription Activator; TenA Protein; Transcriptional Activator TenA; Transcriptional Regulator TenA/THI-4 Family Protein; TenA Family Transcriptional Regulator
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTETFFETLRGECATDWSAAVNHRFVRELCDGSIADAAMARYLVQDHRFLDAFLTLLGAAIASADRFESRLRFGRFAGMV SGEENDYFLRAFAALGVSAADRAAIPDSAPTAGFQALMREAAATRAYPAVLAVLNVAEGLYLDWAMRASRPLPENFVHAE WITLHDNPFFRDFVGFLRDEFDRVGPEAADQARDFFSRAVRLEREFFDDAYAG
Sequences:
>Translated_213_residues MTETFFETLRGECATDWSAAVNHRFVRELCDGSIADAAMARYLVQDHRFLDAFLTLLGAAIASADRFESRLRFGRFAGMV SGEENDYFLRAFAALGVSAADRAAIPDSAPTAGFQALMREAAATRAYPAVLAVLNVAEGLYLDWAMRASRPLPENFVHAE WITLHDNPFFRDFVGFLRDEFDRVGPEAADQARDFFSRAVRLEREFFDDAYAG >Mature_212_residues TETFFETLRGECATDWSAAVNHRFVRELCDGSIADAAMARYLVQDHRFLDAFLTLLGAAIASADRFESRLRFGRFAGMVS GEENDYFLRAFAALGVSAADRAAIPDSAPTAGFQALMREAAATRAYPAVLAVLNVAEGLYLDWAMRASRPLPENFVHAEW ITLHDNPFFRDFVGFLRDEFDRVGPEAADQARDFFSRAVRLEREFFDDAYAG
Specific function: Unknown
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319866, Length=199, Percent_Identity=28.643216080402, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23815; Mature: 23684
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETFFETLRGECATDWSAAVNHRFVRELCDGSIADAAMARYLVQDHRFLDAFLTLLGAA CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IASADRFESRLRFGRFAGMVSGEENDYFLRAFAALGVSAADRAAIPDSAPTAGFQALMRE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH AAATRAYPAVLAVLNVAEGLYLDWAMRASRPLPENFVHAEWITLHDNPFFRDFVGFLRDE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH FDRVGPEAADQARDFFSRAVRLEREFFDDAYAG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TETFFETLRGECATDWSAAVNHRFVRELCDGSIADAAMARYLVQDHRFLDAFLTLLGAA CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IASADRFESRLRFGRFAGMVSGEENDYFLRAFAALGVSAADRAAIPDSAPTAGFQALMRE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH AAATRAYPAVLAVLNVAEGLYLDWAMRASRPLPENFVHAEWITLHDNPFFRDFVGFLRDE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH FDRVGPEAADQARDFFSRAVRLEREFFDDAYAG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA