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The map label for this gene is hspH [H]

Identifier: 119386354

GI number: 119386354

Start: 796319

End: 796765

Strand: Direct

Name: hspH [H]

Synonym: Pden_3646

Alternate gene names: 119386354

Gene position: 796319-796765 (Clockwise)

Preceding gene: 119386353

Following gene: 119386360

Centisome position: 46.03

GC content: 63.98

Gene sequence:

>447_bases
ATGCGCAACTTCGACCTGACCCCGCTTTATCGTGCCTCGGTCGGCTTCGACCGCATGGCCGATGTCATGGATCGTGCCCT
GTCGGCCGATATCGCCAGCTATCCGCCCTATAACATCGAAAAGACCGGCGAGAATGCCTATCGCATCTCGCTTGCCGTTG
CCGGCTTTTCCGCCGACGACCTGACCGTCGAGGTCAAGGACGGGGCCGTCATCGTCTCGGGCAAGAAGGCCGCCGAGGAC
GAGAGCCGCACCTATCTGCATCGCGGCATCGCGACCCGTGCATTCGAGCGCCGCTTCACCCTGGCCGATCATGTCCGCGT
CAGCGGTGCGAGCCACGAGGACGGCATGCTGAACATCGACCTGGTGCGCGAGATCCCCGAGGCGCTGAAACCGCGCCGCA
TCGAGATCGCGAAACCGGCCAAGGCGGTCGAAAAGCTGGACGCCTGA

Upstream 100 bases:

>100_bases
TCCTACCTCAACGCTGTCGGAGGGCCCTTGCGGCACCGACGGACCTGCCCGCCCGGATCGGGGGGCAAGCCTTTGTATCG
CTTGAGAAAGGATGCGAAAA

Downstream 100 bases:

>100_bases
CGGCACGGCCGGACCGGGGCTCTGCCCCGGACCCCGGGGTATTTGGAAAACGGAAAACGCAGGGCGTGGCCGCAGGGTCG
CGCCCGTTGTCTTTTCAGAG

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRNFDLTPLYRASVGFDRMADVMDRALSADIASYPPYNIEKTGENAYRISLAVAGFSADDLTVEVKDGAVIVSGKKAAED
ESRTYLHRGIATRAFERRFTLADHVRVSGASHEDGMLNIDLVREIPEALKPRRIEIAKPAKAVEKLDA

Sequences:

>Translated_148_residues
MRNFDLTPLYRASVGFDRMADVMDRALSADIASYPPYNIEKTGENAYRISLAVAGFSADDLTVEVKDGAVIVSGKKAAED
ESRTYLHRGIATRAFERRFTLADHVRVSGASHEDGMLNIDLVREIPEALKPRRIEIAKPAKAVEKLDA
>Mature_148_residues
MRNFDLTPLYRASVGFDRMADVMDRALSADIASYPPYNIEKTGENAYRISLAVAGFSADDLTVEVKDGAVIVSGKKAAED
ESRTYLHRGIATRAFERRFTLADHVRVSGASHEDGMLNIDLVREIPEALKPRRIEIAKPAKAVEKLDA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=136, Percent_Identity=52.2058823529412, Blast_Score=154, Evalue=2e-39,
Organism=Escherichia coli, GI87082316, Length=141, Percent_Identity=43.2624113475177, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16367; Mature: 16367

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFDLTPLYRASVGFDRMADVMDRALSADIASYPPYNIEKTGENAYRISLAVAGFSADD
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEEEECCCCCC
LTVEVKDGAVIVSGKKAAEDESRTYLHRGIATRAFERRFTLADHVRVSGASHEDGMLNID
EEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCEEEHH
LVREIPEALKPRRIEIAKPAKAVEKLDA
HHHHHHHHCCCCEEEECCHHHHHHHHCC
>Mature Secondary Structure
MRNFDLTPLYRASVGFDRMADVMDRALSADIASYPPYNIEKTGENAYRISLAVAGFSADD
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEEEECCCCCC
LTVEVKDGAVIVSGKKAAEDESRTYLHRGIATRAFERRFTLADHVRVSGASHEDGMLNID
EEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCEEEHH
LVREIPEALKPRRIEIAKPAKAVEKLDA
HHHHHHHHCCCCEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]