| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is eamB [H]
Identifier: 119386335
GI number: 119386335
Start: 778997
End: 779587
Strand: Direct
Name: eamB [H]
Synonym: Pden_3627
Alternate gene names: 119386335
Gene position: 778997-779587 (Clockwise)
Preceding gene: 119386332
Following gene: 119386338
Centisome position: 45.03
GC content: 68.02
Gene sequence:
>591_bases ATGTCGCATCAGATACTCGTGGCGCTTGTCGCCTTCGCCTTCGTCACCTCGGTCACGCCGGGGCCCAACAACCTGATGCT GATGGCCTCGGGTGCGAATTTCGGCATCCGCCGCAGCATTCCGCATCTTCTGGGCGTGGCGCTGGGATTTGGCGCCATGG TGGCGCTGTTGGGGCTGGGCGTGGACCGGCTGATCGCGGGCGCGCCGCGGCTGGCCGAGGCGTTGAAATGGATCAGCATG GCTTACGTCCTGTGGCTTGCGTGGAAGATCGCCTATGCTGCGGCGCCCGGAACCGAAGGGGCGGCGGCGCGGCCGATGAG CTTCCTGGCCGCCTGCGCCTTTCAATGGGTGAATCCCAAGGCGTGGATGATGGCGCTGGGGGCGCTTTCGGCCTATTCGG CCGGGGTGGGCGGCACGCTGGTGGTGGCGCTGGTCTTTACCCTGGTGAACCTGCCCTCGGTCGCGCTTTGGGCGGCGATG GGGCAGGGGTTGCGCGGCGCCTTGCAGGACCCGGCGCGGCTCATGCTGTTCAACCGGGCGATGGCGGTGCTGCTGGTCGG CTCGATGCTGCCGGTCGTCACCGGGCACTGA
Upstream 100 bases:
>100_bases TTCGAACTCTGATTGTTGATCTATGCTGTTCATCTTCAAACTTGATCGGAAATTGCGCCTGGCCCGCAGTATCATTGTGG CTTCTTTCGGGAAATCCGCA
Downstream 100 bases:
>100_bases CCGCGATCAGCGTCGCGACGCCGGCGACGATCAGAGCCATCCCGCCAAGCTGGCGCGGGCTGGCGCCTTCGCGGAAGACC CGGCCCGAAACCAGTTGCGC
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSHQILVALVAFAFVTSVTPGPNNLMLMASGANFGIRRSIPHLLGVALGFGAMVALLGLGVDRLIAGAPRLAEALKWISM AYVLWLAWKIAYAAAPGTEGAAARPMSFLAACAFQWVNPKAWMMALGALSAYSAGVGGTLVVALVFTLVNLPSVALWAAM GQGLRGALQDPARLMLFNRAMAVLLVGSMLPVVTGH
Sequences:
>Translated_196_residues MSHQILVALVAFAFVTSVTPGPNNLMLMASGANFGIRRSIPHLLGVALGFGAMVALLGLGVDRLIAGAPRLAEALKWISM AYVLWLAWKIAYAAAPGTEGAAARPMSFLAACAFQWVNPKAWMMALGALSAYSAGVGGTLVVALVFTLVNLPSVALWAAM GQGLRGALQDPARLMLFNRAMAVLLVGSMLPVVTGH >Mature_195_residues SHQILVALVAFAFVTSVTPGPNNLMLMASGANFGIRRSIPHLLGVALGFGAMVALLGLGVDRLIAGAPRLAEALKWISMA YVLWLAWKIAYAAAPGTEGAAARPMSFLAACAFQWVNPKAWMMALGALSAYSAGVGGTLVVALVFTLVNLPSVALWAAMG QGLRGALQDPARLMLFNRAMAVLLVGSMLPVVTGH
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=195, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 20388; Mature: 20257
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQILVALVAFAFVTSVTPGPNNLMLMASGANFGIRRSIPHLLGVALGFGAMVALLGLG CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC VDRLIAGAPRLAEALKWISMAYVLWLAWKIAYAAAPGTEGAAARPMSFLAACAFQWVNPK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHH AWMMALGALSAYSAGVGGTLVVALVFTLVNLPSVALWAAMGQGLRGALQDPARLMLFNRA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH MAVLLVGSMLPVVTGH HHHHHHHHHHHHHCCC >Mature Secondary Structure SHQILVALVAFAFVTSVTPGPNNLMLMASGANFGIRRSIPHLLGVALGFGAMVALLGLG CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC VDRLIAGAPRLAEALKWISMAYVLWLAWKIAYAAAPGTEGAAARPMSFLAACAFQWVNPK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHH AWMMALGALSAYSAGVGGTLVVALVFTLVNLPSVALWAAMGQGLRGALQDPARLMLFNRA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH MAVLLVGSMLPVVTGH HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA