| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386306
Identifier: 119386306
GI number: 119386306
Start: 748251
End: 748835
Strand: Direct
Name: 119386306
Synonym: Pden_3598
Alternate gene names: NA
Gene position: 748251-748835 (Clockwise)
Preceding gene: 119386305
Following gene: 119386308
Centisome position: 43.25
GC content: 64.44
Gene sequence:
>585_bases ATGAGCATCCACGACATACCGGACGAGGTGCTGCGCCGGGGCGTCACCGGCTGCACGATCCTGTGCCAGATGGATTTCAA GACGAACCCCAAGAACTGGTGGCTCGGCTATGGCCCGCTGACCGCTGGCGGGGTCGAATATCAGGGCACGGGCGACGTGA TCCAGATCAGCGCCATGGAACTGACCTACGGCATGTCGGCGGGAATGGTGCGGTTCACCATCCCGAACGCCTCGCCCGAG ATGATCGCGCTCTGCGACGATCAGGGCGCCGAGGTCAACGGGCGCCGGGTGCAGGTGCTGTATCAGCTTTTCGCAACGGA CGAGCGCGACGGTGAGCACCGGGGACGGCTGATCGGCGATCCGATGAGCGTGTTCGTCGGCCGCATGAAGGACATGACCA GCACGTCCAGCGCAGACGCCCGCACCATCGAACTGGAATGCTACGGGCGCATGTCGCAGCAGGGCAAGCCGCCTTACGGG CGCTGGACCCACACCGACCAGCAGCGCCGCTATCCGGGCGATACCGGGTTGGAACTGCTGGCAACGCTCAAGGACAAGGC AATCACCTGGGTGCCAGGAAGCTAA
Upstream 100 bases:
>100_bases ATCAGCTACGGCTCAAGGTGATGATGGAGTCCGGCGACCAGATCGGCCTCGGGACGGGGCGTTTCCGTTCCTCGGCCCTG TCGCTGGTGGAGGCGTTCTG
Downstream 100 bases:
>100_bases AGGAGATCGTTATGAAATATCTTCGCCGTCTATCACCTCTGCGGCTCGTCGCAAAAATTGAACAGCGGATTGCCGAGCGA GTGCTTCGGCGTCTCGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAMELTYGMSAGMVRFTIPNASPE MIALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGDPMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYG RWTHTDQQRRYPGDTGLELLATLKDKAITWVPGS
Sequences:
>Translated_194_residues MSIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAMELTYGMSAGMVRFTIPNASPE MIALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGDPMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYG RWTHTDQQRRYPGDTGLELLATLKDKAITWVPGS >Mature_193_residues SIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAMELTYGMSAGMVRFTIPNASPEM IALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGDPMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYGR WTHTDQQRRYPGDTGLELLATLKDKAITWVPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21529; Mature: 21398
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAME CCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEECCCCCEEEEEEEE LTYGMSAGMVRFTIPNASPEMIALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGD EEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHEEHHHHHHCCCCCCCCCCCEECC PMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYGRWTHTDQQRRYPGDTGLELL HHHHHHHHHHHCCCCCCCCCEEEEEEEEECHHCCCCCCCCCCCCCCCHHCCCCCCHHHHH ATLKDKAITWVPGS HHHHCCEEEECCCC >Mature Secondary Structure SIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAME CCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEECCCCCEEEEEEEE LTYGMSAGMVRFTIPNASPEMIALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGD EEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHEEHHHHHHCCCCCCCCCCCEECC PMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYGRWTHTDQQRRYPGDTGLELL HHHHHHHHHHHCCCCCCCCCEEEEEEEEECHHCCCCCCCCCCCCCCCHHCCCCCCHHHHH ATLKDKAITWVPGS HHHHCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA