| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is hisD2 [H]
Identifier: 119386288
GI number: 119386288
Start: 731289
End: 732599
Strand: Direct
Name: hisD2 [H]
Synonym: Pden_3579
Alternate gene names: 119386288
Gene position: 731289-732599 (Clockwise)
Preceding gene: 119386287
Following gene: 119386289
Centisome position: 42.27
GC content: 65.83
Gene sequence:
>1311_bases ATGGCCATCACCTATCTGAAATCCGGCCGCAGCGACTCGGCCCGTGCCGAGGACGACCGCCGCACCCGCGAGACGGTCGA GGCCGCGCTGGCCGACATTTCCGCGCGCGGCGACATTGCCGTGCGCGAAATGGCGGCGAAATTCGACGGCTACGCCCCGG ACAGCTTCCGCCTGTCGCAGGATCAGATCGACGCGCTGATCGCGACGCTGACCCCGCGCGAGATCGAGGATATCCGCTTT GCGCAGGCGCAGGTGCGCCGCTTTGCCCAGATCCAGCGCGATTCCATGAAGGATGTCGAGGTCGAGACCCTGCCGGGCGT GGTCCTTGGCCACAAGCACATCCCCGTTCAGGCGGTGGGCTGCTATGTGCCGGGCGGCAAGTTCCCGATGGTGGCCTCGG CGCATATGTCGATCCTGACCGCCTCGGTCGCGGGCGTGCCGCGCATCATCGCCGCGACCCCGCCCTTTCAGGGCAAGCCC AATGCCGCCGTGATCGCCGCCATGCATTTCGCCGGCGCGCATGAGATCTATGTCCTCGGCGGTATCCAGGCCATCGGTGC GATGGCGCTTGGCACCGAAACCATCGCCCCCGTCGATATGCTGGTCGGCCCCGGCAACGCCTTCGTGGCCGAGGCCAAGC GGCAACTGTTCGGGCGCGTCGGCATCGATCTTTTCGCCGGTCCGACCGAGACGATGGTGATCGCCGACGACACCGTGGAC GCCGAGCTTTGCGCGACCGATCTGCTGGGCCAGGCCGAACACGGCTATAACTCGCCCGCCGTGCTGGTGACGAATTCGCG TGCGCTGGCCGAAGGCACGTTGGCCGAGATCGAACGGCTGCTGGCGATCTTGCCGACCGCCGTCACCGCCGCCGCGTCGT GGCGCGACTACGGCGAGGTGATCCTGTGCGACACGCATGAAGAGATGTTGCAGGTCGCCAACGAGATCGCATCGGAACAT GTGCAGGTGATGACCGACCGCGACGACTGGTATCTGGACAGCATGGTCGATTACGGCGCGCTGTTCCTTGGCCCGCGCAC CCATGTCGCCAACGGCGACAAGGTGATCGGCACCAATCACACTTTGCCGACGCGCCGCGCCGGACGTTATACCGGCGGGC TCTGGGTCGGGAAATTCATCAAGACCCACACCTATCAGCGCGTCCTGACGGATGACGCCGCCGCCGATATCGGCCGCTAT TGCTCGCGCCTGTGCATGATCGAGGGCTTTGTCGGCCATGCCGAACAGGCCAATATCCGCGTGCGCCGCTATGGTGGCGA CAACATTCCCTATGGCGAGGCCGCCCAATGA
Upstream 100 bases:
>100_bases ATCGTCGAGGGGCTGGGCCTTGAGGTCGCGACCCCAGCCGAGGCGCGCGAGCTGCTGGCGCTAAAGGGTGGCGATCAGGT CAATTTCTAAGGGAAAAATC
Downstream 100 bases:
>100_bases CCCCGCTTCCCGATTTCTCGTTGAAGGGCAGGGTCGCGCTGGTCACCGGCGCCGGTCGCGGCATCGGGCGCGCCATCGCC GAGGTCTATGCACAGGCGGG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 2 [H]
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MAITYLKSGRSDSARAEDDRRTRETVEAALADISARGDIAVREMAAKFDGYAPDSFRLSQDQIDALIATLTPREIEDIRF AQAQVRRFAQIQRDSMKDVEVETLPGVVLGHKHIPVQAVGCYVPGGKFPMVASAHMSILTASVAGVPRIIAATPPFQGKP NAAVIAAMHFAGAHEIYVLGGIQAIGAMALGTETIAPVDMLVGPGNAFVAEAKRQLFGRVGIDLFAGPTETMVIADDTVD AELCATDLLGQAEHGYNSPAVLVTNSRALAEGTLAEIERLLAILPTAVTAAASWRDYGEVILCDTHEEMLQVANEIASEH VQVMTDRDDWYLDSMVDYGALFLGPRTHVANGDKVIGTNHTLPTRRAGRYTGGLWVGKFIKTHTYQRVLTDDAAADIGRY CSRLCMIEGFVGHAEQANIRVRRYGGDNIPYGEAAQ
Sequences:
>Translated_436_residues MAITYLKSGRSDSARAEDDRRTRETVEAALADISARGDIAVREMAAKFDGYAPDSFRLSQDQIDALIATLTPREIEDIRF AQAQVRRFAQIQRDSMKDVEVETLPGVVLGHKHIPVQAVGCYVPGGKFPMVASAHMSILTASVAGVPRIIAATPPFQGKP NAAVIAAMHFAGAHEIYVLGGIQAIGAMALGTETIAPVDMLVGPGNAFVAEAKRQLFGRVGIDLFAGPTETMVIADDTVD AELCATDLLGQAEHGYNSPAVLVTNSRALAEGTLAEIERLLAILPTAVTAAASWRDYGEVILCDTHEEMLQVANEIASEH VQVMTDRDDWYLDSMVDYGALFLGPRTHVANGDKVIGTNHTLPTRRAGRYTGGLWVGKFIKTHTYQRVLTDDAAADIGRY CSRLCMIEGFVGHAEQANIRVRRYGGDNIPYGEAAQ >Mature_435_residues AITYLKSGRSDSARAEDDRRTRETVEAALADISARGDIAVREMAAKFDGYAPDSFRLSQDQIDALIATLTPREIEDIRFA QAQVRRFAQIQRDSMKDVEVETLPGVVLGHKHIPVQAVGCYVPGGKFPMVASAHMSILTASVAGVPRIIAATPPFQGKPN AAVIAAMHFAGAHEIYVLGGIQAIGAMALGTETIAPVDMLVGPGNAFVAEAKRQLFGRVGIDLFAGPTETMVIADDTVDA ELCATDLLGQAEHGYNSPAVLVTNSRALAEGTLAEIERLLAILPTAVTAAASWRDYGEVILCDTHEEMLQVANEIASEHV QVMTDRDDWYLDSMVDYGALFLGPRTHVANGDKVIGTNHTLPTRRAGRYTGGLWVGKFIKTHTYQRVLTDDAAADIGRYC SRLCMIEGFVGHAEQANIRVRRYGGDNIPYGEAAQ
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=401, Percent_Identity=33.9152119700748, Blast_Score=213, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6319819, Length=411, Percent_Identity=33.8199513381995, Blast_Score=199, Evalue=6e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47010; Mature: 46879
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITYLKSGRSDSARAEDDRRTRETVEAALADISARGDIAVREMAAKFDGYAPDSFRLSQ CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCH DQIDALIATLTPREIEDIRFAQAQVRRFAQIQRDSMKDVEVETLPGVVLGHKHIPVQAVG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCCEEEEE CYVPGGKFPMVASAHMSILTASVAGVPRIIAATPPFQGKPNAAVIAAMHFAGAHEIYVLG EECCCCCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEE GIQAIGAMALGTETIAPVDMLVGPGNAFVAEAKRQLFGRVGIDLFAGPTETMVIADDTVD CHHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCC AELCATDLLGQAEHGYNSPAVLVTNSRALAEGTLAEIERLLAILPTAVTAAASWRDYGEV HHHHHHHHHHCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE ILCDTHEEMLQVANEIASEHVQVMTDRDDWYLDSMVDYGALFLGPRTHVANGDKVIGTNH EEECCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCEEEECCCCCCCCCCEEEECCC TLPTRRAGRYTGGLWVGKFIKTHTYQRVLTDDAAADIGRYCSRLCMIEGFVGHAEQANIR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VRRYGGDNIPYGEAAQ EEEECCCCCCCCCCCC >Mature Secondary Structure AITYLKSGRSDSARAEDDRRTRETVEAALADISARGDIAVREMAAKFDGYAPDSFRLSQ EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCH DQIDALIATLTPREIEDIRFAQAQVRRFAQIQRDSMKDVEVETLPGVVLGHKHIPVQAVG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCCEEEEE CYVPGGKFPMVASAHMSILTASVAGVPRIIAATPPFQGKPNAAVIAAMHFAGAHEIYVLG EECCCCCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEE GIQAIGAMALGTETIAPVDMLVGPGNAFVAEAKRQLFGRVGIDLFAGPTETMVIADDTVD CHHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCC AELCATDLLGQAEHGYNSPAVLVTNSRALAEGTLAEIERLLAILPTAVTAAASWRDYGEV HHHHHHHHHHCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE ILCDTHEEMLQVANEIASEHVQVMTDRDDWYLDSMVDYGALFLGPRTHVANGDKVIGTNH EEECCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCEEEECCCCCCCCCCEEEECCC TLPTRRAGRYTGGLWVGKFIKTHTYQRVLTDDAAADIGRYCSRLCMIEGFVGHAEQANIR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VRRYGGDNIPYGEAAQ EEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]