| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is livK [C]
Identifier: 119386283
GI number: 119386283
Start: 724667
End: 725908
Strand: Direct
Name: livK [C]
Synonym: Pden_3574
Alternate gene names: 119386283
Gene position: 724667-725908 (Clockwise)
Preceding gene: 119386280
Following gene: 119386284
Centisome position: 41.89
GC content: 63.77
Gene sequence:
>1242_bases ATGATCAAGACGATGGGGCGCCGACAACTGCTGAAAACCGGAACGGCGGCGGGGCTGATGACGCTGGCCGCGCCAAGCCT TTTGCGCGCGCAGGGCGATGCGGTGGTGCTGGGCCACCTGACGCCGCGCACGGGCTTTCTGGGTCCGATGGGCGAATATG CGGTGATGGCCGTCGATCTCGCCGTCGAGGAAATCAACGCCAACGGCGGCATCAACGGCCGCATGCTGACCGTGGTGAAG GAGGATTCCGTCAACCCGCAGACCGCCACCACCAAGGCGGAGCGGCTGGTCGAGCGCCGCGACCTGGCGATGATCATCGG CGAGATTTCCTCGGCTTCGGCCTTGTCCATCGCGCAGGTCACCGCGCGGGCGAACAAGCTGTTCATCAACACCGGCGCGA ACTCGGACACGTTGCGCGGCAGCGACTGCAAGCGCACCATGTTCCACACCGAGGCGCAGAACGTCATGTATGTGAACGCC GAGGGCCAGTATTTCCTTCAGAACGACATGGTGAAGGACAAGAAGTGGTTCATTCTCAGCTCGGATTACGCCTTCGGGCA CGATCTGCGCCACGGTGCGCTTGGCTTCCTTGAACGGCATGGCGGGCAGGCGGTCGGCGATGAGCTGATCCCGACCGACG CGACGGATTTCTCGTCGCATCTGCTGAACATCCGCAACCTTCAGCCCGACCTGATCGTGGTAAACCTCGCGGGCACCTCG GGCGCCAGCTTCATGAAGCAATATGGCGAGTTCGGCCTGGATATCCCGCTGGGCGGCTTCGACTACAACAGCTCCATCGC ATGGGCGACGGGTCCGCAGGACTTCAAGGGCACATGGCCCTGCATCTGGACCCATCAGGTGCAGACCGACGCCTCGCAGG CTTTCGCGCAGGCGTTCCAGGCGAAATACGGCAAGCCCGCAGAAAACCAGGCTTACTCCGACTATATCGCCGTGCGCATT GCGGCCGAGGCCATCGCGAAGACCGGCGGCACCGATACGGCCGCGCTGATCGAGTTCCTCGAAGACCCCGCGACCGAGTT CGACATCCTCAAGGACCGCAAGGGCCGGTTCGACGCCGCCACGCACCAGCTTTTGCAAGAGGTCTATGCCGTCACCGCCC TCGATCCGTCCGAGGTGCAGAACGAATGGGACATTTTCACCACCTCGGGGCCGCTGCCCGGAGCGGAGGTGCCGCTGGAC GAGTTGATCAAGGGCGCGGTCGGCGGCGACTGCACGTTCTGA
Upstream 100 bases:
>100_bases CCATTTCGATTCCAGTATGATCTATGATCACACTGATGGAGCCGGAAGTCAAGCCGGAGGAGGCGACGGCTCCGCAGGTC TCAGGGAGGAAAAGAGTGTC
Downstream 100 bases:
>100_bases TCCCGAAGAACCCGCAAGGGCAGGGCGCGTCCCGGCGACGCGCCCGATCATCTCTCATGCCATTGGGGATGCCTCATGAC ATTGGTCTTTCTTTCGCAGC
Product: hypothetical protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MIKTMGRRQLLKTGTAAGLMTLAAPSLLRAQGDAVVLGHLTPRTGFLGPMGEYAVMAVDLAVEEINANGGINGRMLTVVK EDSVNPQTATTKAERLVERRDLAMIIGEISSASALSIAQVTARANKLFINTGANSDTLRGSDCKRTMFHTEAQNVMYVNA EGQYFLQNDMVKDKKWFILSSDYAFGHDLRHGALGFLERHGGQAVGDELIPTDATDFSSHLLNIRNLQPDLIVVNLAGTS GASFMKQYGEFGLDIPLGGFDYNSSIAWATGPQDFKGTWPCIWTHQVQTDASQAFAQAFQAKYGKPAENQAYSDYIAVRI AAEAIAKTGGTDTAALIEFLEDPATEFDILKDRKGRFDAATHQLLQEVYAVTALDPSEVQNEWDIFTTSGPLPGAEVPLD ELIKGAVGGDCTF
Sequences:
>Translated_413_residues MIKTMGRRQLLKTGTAAGLMTLAAPSLLRAQGDAVVLGHLTPRTGFLGPMGEYAVMAVDLAVEEINANGGINGRMLTVVK EDSVNPQTATTKAERLVERRDLAMIIGEISSASALSIAQVTARANKLFINTGANSDTLRGSDCKRTMFHTEAQNVMYVNA EGQYFLQNDMVKDKKWFILSSDYAFGHDLRHGALGFLERHGGQAVGDELIPTDATDFSSHLLNIRNLQPDLIVVNLAGTS GASFMKQYGEFGLDIPLGGFDYNSSIAWATGPQDFKGTWPCIWTHQVQTDASQAFAQAFQAKYGKPAENQAYSDYIAVRI AAEAIAKTGGTDTAALIEFLEDPATEFDILKDRKGRFDAATHQLLQEVYAVTALDPSEVQNEWDIFTTSGPLPGAEVPLD ELIKGAVGGDCTF >Mature_413_residues MIKTMGRRQLLKTGTAAGLMTLAAPSLLRAQGDAVVLGHLTPRTGFLGPMGEYAVMAVDLAVEEINANGGINGRMLTVVK EDSVNPQTATTKAERLVERRDLAMIIGEISSASALSIAQVTARANKLFINTGANSDTLRGSDCKRTMFHTEAQNVMYVNA EGQYFLQNDMVKDKKWFILSSDYAFGHDLRHGALGFLERHGGQAVGDELIPTDATDFSSHLLNIRNLQPDLIVVNLAGTS GASFMKQYGEFGLDIPLGGFDYNSSIAWATGPQDFKGTWPCIWTHQVQTDASQAFAQAFQAKYGKPAENQAYSDYIAVRI AAEAIAKTGGTDTAALIEFLEDPATEFDILKDRKGRFDAATHQLLQEVYAVTALDPSEVQNEWDIFTTSGPLPGAEVPLD ELIKGAVGGDCTF
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44637; Mature: 44637
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTMGRRQLLKTGTAAGLMTLAAPSLLRAQGDAVVLGHLTPRTGFLGPMGEYAVMAVDL CCCCCCHHHHHHHCCHHHHHHHHCHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEEH AVEEINANGGINGRMLTVVKEDSVNPQTATTKAERLVERRDLAMIIGEISSASALSIAQV HHEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHH TARANKLFINTGANSDTLRGSDCKRTMFHTEAQNVMYVNAEGQYFLQNDMVKDKKWFILS HHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEEECCCCCCCEEEEEE SDYAFGHDLRHGALGFLERHGGQAVGDELIPTDATDFSSHLLNIRNLQPDLIVVNLAGTS CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC GASFMKQYGEFGLDIPLGGFDYNSSIAWATGPQDFKGTWPCIWTHQVQTDASQAFAQAFQ CHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHH AKYGKPAENQAYSDYIAVRIAAEAIAKTGGTDTAALIEFLEDPATEFDILKDRKGRFDAA HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHH THQLLQEVYAVTALDPSEVQNEWDIFTTSGPLPGAEVPLDELIKGAVGGDCTF HHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MIKTMGRRQLLKTGTAAGLMTLAAPSLLRAQGDAVVLGHLTPRTGFLGPMGEYAVMAVDL CCCCCCHHHHHHHCCHHHHHHHHCHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEEH AVEEINANGGINGRMLTVVKEDSVNPQTATTKAERLVERRDLAMIIGEISSASALSIAQV HHEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHH TARANKLFINTGANSDTLRGSDCKRTMFHTEAQNVMYVNAEGQYFLQNDMVKDKKWFILS HHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEEECCCCCCCEEEEEE SDYAFGHDLRHGALGFLERHGGQAVGDELIPTDATDFSSHLLNIRNLQPDLIVVNLAGTS CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC GASFMKQYGEFGLDIPLGGFDYNSSIAWATGPQDFKGTWPCIWTHQVQTDASQAFAQAFQ CHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHH AKYGKPAENQAYSDYIAVRIAAEAIAKTGGTDTAALIEFLEDPATEFDILKDRKGRFDAA HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHH THQLLQEVYAVTALDPSEVQNEWDIFTTSGPLPGAEVPLDELIKGAVGGDCTF HHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA