| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is braC [H]
Identifier: 119357483
GI number: 119357483
Start: 1909724
End: 1910956
Strand: Direct
Name: braC [H]
Synonym: Cpha266_1682
Alternate gene names: 119357483
Gene position: 1909724-1910956 (Clockwise)
Preceding gene: 119357482
Following gene: 119357484
Centisome position: 60.94
GC content: 48.5
Gene sequence:
>1233_bases ATGAGAAAAGTATTACACTCTATCGTAGCAGTGCTGCTCGCAACATCGTTTTCCAATATCTCCCTGGCGGCTGATGTTAT CAGAATTGCCATTACAGGGCCCTTTTCAGGCGGCTCCGCACCGATGGGCGTGTCCATGAGAAATGGCGCCAAACTGGCTT TTTCTAAAATCAACCAGAACGGCGGCATTATGATTGCCGGAAAAAAAACGAAAGTTGAGATTATCGAACGCGACGATGAA GGCAAAAACGATCGCGGCGCACTTATTGCCCAGGAAATATCATCGATGAATAACGTTTCGGCTGTTATCGGAACGGTTAA CACCGGCGTAGCCGTCATGGGTGACAAGTATTATGTTGAAAAAAACATTGTCAAAATCATTACGCCGGCAGCTGGCAGCG CATCAATGACGCAATGGAACAAAACCGGTGTTAAAAATCTGCCGATTTTCCGTTTTGCTGCGCATGATGGCATCCAGGCA CAGATGGTGGTAGAACAAGCATTGAAACTTGGTATCAAAAAAGTCGCAATATTATATGATGCAACCAATTATGGTGTTTC AGGACGTGACGATCTGACCAGGCAGATCAATAAACAGGGCAATAAGCTTCAAGTGATGGCTCTCGAAAAATTTGCCATCG GTGACAAGGATATGACCGGTCAGCTCATTAAAGCAAAGGCTGCCGGTGCCCAGGCCATCCTGATATGGGGAATCGGACCT GAACTGGCAGCAGTTGCCGCCGGAAAGGAAAAACTTGGCTTCAAAGTACCGATGATTGGTGGATGGACGCTCTCCATGAG CAATTTCATCGATACAGCCGGGCCCGCAGGCAATGGCGCTCTTATGCCTCAAACATTTATTGAAGACCCCTCCATAGCAA GAGCACGGCCCTTTATTCAGGCATATCATACAATGTACGGCGGCTCAAAAATCCCTTCTCCGGTATCCGCTGCCCAGGGT TATGACGCTGCCTTGCTGCTTGCTCAGGCCATTCATGAAGCCGGATCATCCAACCCCTCAAAAATCAGAGTTGCTCTCGA AAACCTTAAAGTCACCGTCAAAGGATCGATTGCCGACTGGAAAAAACCATGGTCAACGTGGAACCCTGCCAATGTCGAGA GCCATGAAGCATTCCGTCGATCAACAACAGTGATGGGTCAGGTGAAAAACGGACGGGTGGTACTGGCCAATTCTGCTGAC AAGGCTGTTCTGGAAAGATCCGGCAGCAGGTAA
Upstream 100 bases:
>100_bases TACACATAACCCGAACCGACGTTATACCACCTGAAAAAACAGTAACCTCATAGCGCCATTAATACTTTTTTTCCACAACC TAAACCACTGAAGGAACAAA
Downstream 100 bases:
>100_bases AACCCCCAATAATTGAATGAACAAAAAGTTCTGCAGCTATGGATCCATACTTTTCAGCGCTTGTCCAGATGGCTGTTTCC GGAGGCTTGATGGGTATGGC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MRKVLHSIVAVLLATSFSNISLAADVIRIAITGPFSGGSAPMGVSMRNGAKLAFSKINQNGGIMIAGKKTKVEIIERDDE GKNDRGALIAQEISSMNNVSAVIGTVNTGVAVMGDKYYVEKNIVKIITPAAGSASMTQWNKTGVKNLPIFRFAAHDGIQA QMVVEQALKLGIKKVAILYDATNYGVSGRDDLTRQINKQGNKLQVMALEKFAIGDKDMTGQLIKAKAAGAQAILIWGIGP ELAAVAAGKEKLGFKVPMIGGWTLSMSNFIDTAGPAGNGALMPQTFIEDPSIARARPFIQAYHTMYGGSKIPSPVSAAQG YDAALLLAQAIHEAGSSNPSKIRVALENLKVTVKGSIADWKKPWSTWNPANVESHEAFRRSTTVMGQVKNGRVVLANSAD KAVLERSGSR
Sequences:
>Translated_410_residues MRKVLHSIVAVLLATSFSNISLAADVIRIAITGPFSGGSAPMGVSMRNGAKLAFSKINQNGGIMIAGKKTKVEIIERDDE GKNDRGALIAQEISSMNNVSAVIGTVNTGVAVMGDKYYVEKNIVKIITPAAGSASMTQWNKTGVKNLPIFRFAAHDGIQA QMVVEQALKLGIKKVAILYDATNYGVSGRDDLTRQINKQGNKLQVMALEKFAIGDKDMTGQLIKAKAAGAQAILIWGIGP ELAAVAAGKEKLGFKVPMIGGWTLSMSNFIDTAGPAGNGALMPQTFIEDPSIARARPFIQAYHTMYGGSKIPSPVSAAQG YDAALLLAQAIHEAGSSNPSKIRVALENLKVTVKGSIADWKKPWSTWNPANVESHEAFRRSTTVMGQVKNGRVVLANSAD KAVLERSGSR >Mature_410_residues MRKVLHSIVAVLLATSFSNISLAADVIRIAITGPFSGGSAPMGVSMRNGAKLAFSKINQNGGIMIAGKKTKVEIIERDDE GKNDRGALIAQEISSMNNVSAVIGTVNTGVAVMGDKYYVEKNIVKIITPAAGSASMTQWNKTGVKNLPIFRFAAHDGIQA QMVVEQALKLGIKKVAILYDATNYGVSGRDDLTRQINKQGNKLQVMALEKFAIGDKDMTGQLIKAKAAGAQAILIWGIGP ELAAVAAGKEKLGFKVPMIGGWTLSMSNFIDTAGPAGNGALMPQTFIEDPSIARARPFIQAYHTMYGGSKIPSPVSAAQG YDAALLLAQAIHEAGSSNPSKIRVALENLKVTVKGSIADWKKPWSTWNPANVESHEAFRRSTTVMGQVKNGRVVLANSAD KAVLERSGSR
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=344, Percent_Identity=25, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI48994941, Length=301, Percent_Identity=24.9169435215947, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43505; Mature: 43505
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVLHSIVAVLLATSFSNISLAADVIRIAITGPFSGGSAPMGVSMRNGAKLAFSKINQN CHHHHHHHHHHHHHHCCCCCHHEEEEEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCC GGIMIAGKKTKVEIIERDDEGKNDRGALIAQEISSMNNVSAVIGTVNTGVAVMGDKYYVE CCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEECCEEEEE KNIVKIITPAAGSASMTQWNKTGVKNLPIFRFAAHDGIQAQMVVEQALKLGIKKVAILYD CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEE ATNYGVSGRDDLTRQINKQGNKLQVMALEKFAIGDKDMTGQLIKAKAAGAQAILIWGIGP CCCCCCCCHHHHHHHHHCCCCEEEEEEEEEHCCCCCCCCCHHEEEECCCCCEEEEEECCH ELAAVAAGKEKLGFKVPMIGGWTLSMSNFIDTAGPAGNGALMPQTFIEDPSIARARPFIQ HHHHHHCCHHHCCEECCEECCEEEEHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHH AYHTMYGGSKIPSPVSAAQGYDAALLLAQAIHEAGSSNPSKIRVALENLKVTVKGSIADW HHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCC KKPWSTWNPANVESHEAFRRSTTVMGQVKNGRVVLANSADKAVLERSGSR CCCCCCCCCCCCCHHHHHHHHHHEEEEECCCEEEEECCCCHHHHHCCCCC >Mature Secondary Structure MRKVLHSIVAVLLATSFSNISLAADVIRIAITGPFSGGSAPMGVSMRNGAKLAFSKINQN CHHHHHHHHHHHHHHCCCCCHHEEEEEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCC GGIMIAGKKTKVEIIERDDEGKNDRGALIAQEISSMNNVSAVIGTVNTGVAVMGDKYYVE CCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEECCEEEEE KNIVKIITPAAGSASMTQWNKTGVKNLPIFRFAAHDGIQAQMVVEQALKLGIKKVAILYD CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEE ATNYGVSGRDDLTRQINKQGNKLQVMALEKFAIGDKDMTGQLIKAKAAGAQAILIWGIGP CCCCCCCCHHHHHHHHHCCCCEEEEEEEEEHCCCCCCCCCHHEEEECCCCCEEEEEECCH ELAAVAAGKEKLGFKVPMIGGWTLSMSNFIDTAGPAGNGALMPQTFIEDPSIARARPFIQ HHHHHHCCHHHCCEECCEECCEEEEHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHH AYHTMYGGSKIPSPVSAAQGYDAALLLAQAIHEAGSSNPSKIRVALENLKVTVKGSIADW HHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCC KKPWSTWNPANVESHEAFRRSTTVMGQVKNGRVVLANSADKAVLERSGSR CCCCCCCCCCCCCHHHHHHHHHHEEEEECCCEEEEECCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]