| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357478
Identifier: 119357478
GI number: 119357478
Start: 1905514
End: 1906092
Strand: Direct
Name: 119357478
Synonym: Cpha266_1677
Alternate gene names: NA
Gene position: 1905514-1906092 (Clockwise)
Preceding gene: 119357477
Following gene: 119357479
Centisome position: 60.8
GC content: 53.54
Gene sequence:
>579_bases ATGACTGAAACCCGGATACATGAGGAACCGAAACCATGGACAACGGTATCCTCCCGATACCTCTACACCGAACCATGGCT GACGCTCAGAAAAGACAAGGTCGAACTTTCGAACGGCAGAACCATTGACGACTACTACATTTCGGAATTTCCCCCATGGT GCAACACCCTCGCCTTTACAGTCGACCGAAAGGCCGTGCTCATCCGGCAGTATCGACACGGCATCGGCAAGGTGTACTAC GAAATTCCAGCCGGCGTGCATGACAAAAAAGGTGAATCCGTGCTTGACGCGGCAAAACGGGAACTGCTTGAAGAGACCGG TTTCGGCGGCGGCACCTGGAAACCATGGATGGAACTCAGCGCAAACCCTGCGCTGCAAAACAACATTACCTACACCTTTC TTGCCGAAGGGGTCGAACTGCTTGACCGACAGCACCTCGATGCAACCGAAGAGATCTCCGTTCATCTGGTCAGTATTGAG CAACTCCGCACCATTGTGCTCGATGGAGAGATGATACAGGCACTGCACGCAGCGCCGATCCTGAAATATTTTGCAACAGC CGGGCCGCTCAACCCATGA
Upstream 100 bases:
>100_bases CAACATTTCCAGGCATCGCCATTCTCACCACGGTGGTATGCTTTAACCTGATCGGTGACGGCGTGCGTGACGCTCTCGAT CCGAGAATGAGAGGATAACC
Downstream 100 bases:
>100_bases ACACTGGTGGTCATGAAAAAAACCCGACAACTCACCCTTCTCGAAGAGACCGTCAAAACACTGGGCTACACCCTGCGCTA TGAAAAAGGAACCTTTCTTG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase; Hydrolase NUDIX Family; NUDIX/MutT-Family Protein; Hydrolase Protein; MutT/NUDIX Family Protein; NTP Pyrophosphohydrolase; MutT/Nudix Family Protein; Phosphohydrolase; NUDIX Family Hydrolase; MutT/NUDIX Family ADP Compounds Hydrolase; MutT/Nudix Family Phosphohydrolase; ADP-Ribose Diphosphatase; ADP Ribose Pyrophosphatase; ADP-Ribose Pyrophosphatase-Like Protein; Nudix Superfamily Hydrolase; MutT/NUDIX Family Hydrolase; Nudix/MutT Family Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTETRIHEEPKPWTTVSSRYLYTEPWLTLRKDKVELSNGRTIDDYYISEFPPWCNTLAFTVDRKAVLIRQYRHGIGKVYY EIPAGVHDKKGESVLDAAKRELLEETGFGGGTWKPWMELSANPALQNNITYTFLAEGVELLDRQHLDATEEISVHLVSIE QLRTIVLDGEMIQALHAAPILKYFATAGPLNP
Sequences:
>Translated_192_residues MTETRIHEEPKPWTTVSSRYLYTEPWLTLRKDKVELSNGRTIDDYYISEFPPWCNTLAFTVDRKAVLIRQYRHGIGKVYY EIPAGVHDKKGESVLDAAKRELLEETGFGGGTWKPWMELSANPALQNNITYTFLAEGVELLDRQHLDATEEISVHLVSIE QLRTIVLDGEMIQALHAAPILKYFATAGPLNP >Mature_191_residues TETRIHEEPKPWTTVSSRYLYTEPWLTLRKDKVELSNGRTIDDYYISEFPPWCNTLAFTVDRKAVLIRQYRHGIGKVYYE IPAGVHDKKGESVLDAAKRELLEETGFGGGTWKPWMELSANPALQNNITYTFLAEGVELLDRQHLDATEEISVHLVSIEQ LRTIVLDGEMIQALHAAPILKYFATAGPLNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21889; Mature: 21758
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETRIHEEPKPWTTVSSRYLYTEPWLTLRKDKVELSNGRTIDDYYISEFPPWCNTLAFT CCCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEECCCCCEECHHHHHCCCCCHHHEEEE VDRKAVLIRQYRHGIGKVYYEIPAGVHDKKGESVLDAAKRELLEETGFGGGTWKPWMELS CCHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCC ANPALQNNITYTFLAEGVELLDRQHLDATEEISVHLVSIEQLRTIVLDGEMIQALHAAPI CCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHEEEEEEHHHHHHHHCCHHHHHHHHHHHH LKYFATAGPLNP HHHHHHCCCCCC >Mature Secondary Structure TETRIHEEPKPWTTVSSRYLYTEPWLTLRKDKVELSNGRTIDDYYISEFPPWCNTLAFT CCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEECCCCCEECHHHHHCCCCCHHHEEEE VDRKAVLIRQYRHGIGKVYYEIPAGVHDKKGESVLDAAKRELLEETGFGGGTWKPWMELS CCHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCC ANPALQNNITYTFLAEGVELLDRQHLDATEEISVHLVSIEQLRTIVLDGEMIQALHAAPI CCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHEEEEEEHHHHHHHHCCHHHHHHHHHHHH LKYFATAGPLNP HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA