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The map label for this gene is tnpA [H]

Identifier: 119357465

GI number: 119357465

Start: 1891139

End: 1892359

Strand: Direct

Name: tnpA [H]

Synonym: Cpha266_1664

Alternate gene names: 119357465

Gene position: 1891139-1892359 (Clockwise)

Preceding gene: 119357464

Following gene: 119357466

Centisome position: 60.34

GC content: 50.2

Gene sequence:

>1221_bases
ATGAACGACCTTACCCTTTTTCAGATGGCCTTGGGACTTGAGTCCCCATGGTATGTATCGTCCTCATCATTTGATGTCGA
CCAAAAGCGCTTGGACATACGAATAGATTTTAAACCGGGCAGCACCTTCTGTTGTCCTCAATGCGGCCGAGAAGGCGTGA
AGGCCTATGATACCTCCGAGGCAACATGGCGCCATCTCAACTTCTTTCAGCATGAGGCCTACCTGACAGTTCGAGTGCCT
CGTATATCCTGCCCTGAGTGCGGCATTCTCAAGCTGCAATCATTTCCCTGGTCTCGCCGTGAGAGCGGCTTTACTCTGCT
GTTTGAGGCGATGATCATGATCATGGCGAAGTCAATGCCGGTCAAGGCAATAGCCGCCATTGTCGGCGAGCATGACACCC
GTATCTGGCGGATCATCAACCACTATGTCGAAAAAGCCCGAGAGCAGGAGGATCACTCGGCAGTCACCATGGTAGGTGTT
GATGAAACCTCCAGCAAGCGCGGTCATAACTATGTGTCGCTGTTCGTTGACCTTGCCGTATCGAAAGTGTTGTTTGCCAC
TGAAGGGAAAGATGCAGCAACGGTCAAGCGATTCAGTGAAGATCTTGCCGCCCATAAGGGTGATCCGGCATTGATCACCG
AATTCTGCAGCGACATGTCACCGGCATTCATCAAAGGGGTCGCCGATAACTTTACCAATGCCCAACTGACCTTTGACAAG
TTCCATATCATGCAGGTCATTAATAATGCTGTCGATGAAGTGCGGCGTCAGGAGCAAAAAGAGCGCCCTGAATTGCAGAG
AAGCCGGTACATCTGGCTGAAAAACCAGAACAACCTGAAGGCTTCACAACGCAAACGCCTTGATGAGTTATCCTTGCCCC
GACTGAATCTGAAAACAACTCGAGCATACCGCATGCGACTAACTTTTCAGGAGTTTTTCGAGCAACCTCAGGTATTGGTG
GAAGCATTTCTGAAGAAGTGGTATTTCTGGGCAACCCACAGCCAGCTGCAGCCAATGAAAGAGGCGGCTTACACCATCAA
ACGACACTGGTCTGGCATTCTGCGATGGTTCACTTCTCGTATCAATAATGGGGTACTTGAGGGAATCAATAGCCTCATCC
AGGCGGCCAAAGCACGGGCACGGGGTTACCGTACTACCAAAAATCTCATCAATATGATCTACCTGATCAGCGGGAAGCTT
AATTTTGGCTTACCCACTTGA

Upstream 100 bases:

>100_bases
AAAGCAGAAGAAAGATTTGGCTCCTCGCTGTTTCAAGTGGGTGATGATATCAGAAGCGTATATTGTGGTGTAACCAACTA
AGCCAGTAACCAGTACGCTC

Downstream 100 bases:

>100_bases
AATAGCGAGGAGCCAAAGATTTTCATCAACCAAACGGTATACAGTTTCACTTTTGACCATCAGGCTTGTTTTCATTTTCT
GTATTGCATCGCTCCTTTTT

Product: transposase, IS204/IS1001/IS1096/IS1165 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNDLTLFQMALGLESPWYVSSSSFDVDQKRLDIRIDFKPGSTFCCPQCGREGVKAYDTSEATWRHLNFFQHEAYLTVRVP
RISCPECGILKLQSFPWSRRESGFTLLFEAMIMIMAKSMPVKAIAAIVGEHDTRIWRIINHYVEKAREQEDHSAVTMVGV
DETSSKRGHNYVSLFVDLAVSKVLFATEGKDAATVKRFSEDLAAHKGDPALITEFCSDMSPAFIKGVADNFTNAQLTFDK
FHIMQVINNAVDEVRRQEQKERPELQRSRYIWLKNQNNLKASQRKRLDELSLPRLNLKTTRAYRMRLTFQEFFEQPQVLV
EAFLKKWYFWATHSQLQPMKEAAYTIKRHWSGILRWFTSRINNGVLEGINSLIQAAKARARGYRTTKNLINMIYLISGKL
NFGLPT

Sequences:

>Translated_406_residues
MNDLTLFQMALGLESPWYVSSSSFDVDQKRLDIRIDFKPGSTFCCPQCGREGVKAYDTSEATWRHLNFFQHEAYLTVRVP
RISCPECGILKLQSFPWSRRESGFTLLFEAMIMIMAKSMPVKAIAAIVGEHDTRIWRIINHYVEKAREQEDHSAVTMVGV
DETSSKRGHNYVSLFVDLAVSKVLFATEGKDAATVKRFSEDLAAHKGDPALITEFCSDMSPAFIKGVADNFTNAQLTFDK
FHIMQVINNAVDEVRRQEQKERPELQRSRYIWLKNQNNLKASQRKRLDELSLPRLNLKTTRAYRMRLTFQEFFEQPQVLV
EAFLKKWYFWATHSQLQPMKEAAYTIKRHWSGILRWFTSRINNGVLEGINSLIQAAKARARGYRTTKNLINMIYLISGKL
NFGLPT
>Mature_406_residues
MNDLTLFQMALGLESPWYVSSSSFDVDQKRLDIRIDFKPGSTFCCPQCGREGVKAYDTSEATWRHLNFFQHEAYLTVRVP
RISCPECGILKLQSFPWSRRESGFTLLFEAMIMIMAKSMPVKAIAAIVGEHDTRIWRIINHYVEKAREQEDHSAVTMVGV
DETSSKRGHNYVSLFVDLAVSKVLFATEGKDAATVKRFSEDLAAHKGDPALITEFCSDMSPAFIKGVADNFTNAQLTFDK
FHIMQVINNAVDEVRRQEQKERPELQRSRYIWLKNQNNLKASQRKRLDELSLPRLNLKTTRAYRMRLTFQEFFEQPQVLV
EAFLKKWYFWATHSQLQPMKEAAYTIKRHWSGILRWFTSRINNGVLEGINSLIQAAKARARGYRTTKNLINMIYLISGKL
NFGLPT

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46886; Mature: 46886

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLTLFQMALGLESPWYVSSSSFDVDQKRLDIRIDFKPGSTFCCPQCGREGVKAYDTSE
CCCHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCCH
ATWRHLNFFQHEAYLTVRVPRISCPECGILKLQSFPWSRRESGFTLLFEAMIMIMAKSMP
HHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
VKAIAAIVGEHDTRIWRIINHYVEKAREQEDHSAVTMVGVDETSSKRGHNYVSLFVDLAV
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
SKVLFATEGKDAATVKRFSEDLAAHKGDPALITEFCSDMSPAFIKGVADNFTNAQLTFDK
HHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEHHH
FHIMQVINNAVDEVRRQEQKERPELQRSRYIWLKNQNNLKASQRKRLDELSLPRLNLKTT
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHH
RAYRMRLTFQEFFEQPQVLVEAFLKKWYFWATHSQLQPMKEAAYTIKRHWSGILRWFTSR
HHHHHEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
INNGVLEGINSLIQAAKARARGYRTTKNLINMIYLISGKLNFGLPT
HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCC
>Mature Secondary Structure
MNDLTLFQMALGLESPWYVSSSSFDVDQKRLDIRIDFKPGSTFCCPQCGREGVKAYDTSE
CCCHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCCH
ATWRHLNFFQHEAYLTVRVPRISCPECGILKLQSFPWSRRESGFTLLFEAMIMIMAKSMP
HHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
VKAIAAIVGEHDTRIWRIINHYVEKAREQEDHSAVTMVGVDETSSKRGHNYVSLFVDLAV
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
SKVLFATEGKDAATVKRFSEDLAAHKGDPALITEFCSDMSPAFIKGVADNFTNAQLTFDK
HHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEHHH
FHIMQVINNAVDEVRRQEQKERPELQRSRYIWLKNQNNLKASQRKRLDELSLPRLNLKTT
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHH
RAYRMRLTFQEFFEQPQVLVEAFLKKWYFWATHSQLQPMKEAAYTIKRHWSGILRWFTSR
HHHHHEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
INNGVLEGINSLIQAAKARARGYRTTKNLINMIYLISGKLNFGLPT
HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]