Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is zraS [C]
Identifier: 119357351
GI number: 119357351
Start: 1758925
End: 1761396
Strand: Reverse
Name: zraS [C]
Synonym: Cpha266_1549
Alternate gene names: 119357351
Gene position: 1761396-1758925 (Counterclockwise)
Preceding gene: 119357356
Following gene: 119357350
Centisome position: 56.2
GC content: 46.52
Gene sequence:
>2472_bases ATGCATGAAGATAATAACAAACGTGAAGCTCTTTCTGGTTCTCCGGTCATAATGAATGCCGAACAGGTTTATGCAATAAG CCGCCAACAACTGCAGCTTTTTATGTCGGCAACTCATGCGGGCATATGGGAGTGGGATACGGTTACAAACAGCGTCATCT GGTCAGATGAAGTGTGGGCGCTCTATGGACTGAACGCTTCTTGCTGCGATGCGACGTTCGAGGCATGGCTGAGTTCAGTT CATCCTGAGGATAGAGAAAAAACCGAGAAAACTGTTTTGGGGGCCGCCAGAGACGATGTTGCATTTGAAGTAGCCTGGAG AAGCCGTGATCTTGACGGCAATGAGCGCTGGCTTATGTCCAAAGGTTTTCCGTTAAGGGATGGCGCAGGACGCACCGGGA GATATGTCGGTATCGTTCTGGATATTACCGATCGCAAGCAGGCTGAAGATGCGCTGTGTGAGAGCGAAGATCGTTTCAGA AAACTTTTTGAAAGCCTTTCTGAAATCAAGCTGATTATCGACTCCCATTCAGGCAAAATTATTGACGCCAATCAGGCTGC GGTGGATTTTTATGGCTGGTCGATTGAAGAGCTGACATCGATGAATATTGAGCAAATCAATACGACTTCATCTGAATTGG TGACTCTGGATACTGAGAAATGCGGATCATTGCATCAGTCATGCGTTTCATTTCGTCATCGGAGGGCGGATGGTTCAATC CGTGATGTGGAGGTATTCAGCAATAATATTGAAATTGCCGGAAATATACTGTATTATTCCACTATTCATGATGTTACCGA GAGAAAACGATTCGAAGCCCTGACAGCATTTCGCCTTCGTCTTCTCGATATGGCTGAAAACCGCTCGGTTGAAGAGTTGC TTAAAGCCACTCTCGATGAATCCGAATGCATGACCGAAAGCTCATTCAGCTTCTGCTGTTTTCTCATGGATGAACGTTCT TCACCAACTTTGCAGGTGTTATCAACCAGTACGGAAAAGGCTATGAGCCTGATGAACAGGAATCAGGAAGTTTTTTCTCA ATTGAGTGAAAGTTCGATATGGAGCGCGGCCATTCTTGAAAAAAAAGCCGTGATTCACAATGATGTCGAGAGAGATCTGC CCGAAGATCACCCCTTCTTCAAGCGTAAACTGGTGGTTCCTATTGTGCAGGGTGATACGGTAATGGCTATTATCGGGGTT GGAAACAAACAGTATCCCTATGATGAGGATGATGCCCGATGGGTTGGAACTCTTGCTGATGTCGCATGGGATATCGTTGC TCGCAAGCGTGCCGAATTGTCTGAAAAGAACACGCAGGAGGCTTTGAGCCAGTCACAAAAGATGGAAATGGTTGGACGGC TTGCCGGTGGTATAGCCCACGATTTCAACAATATGCTTGGGGTGATTCTCGGGCATACGGAAATAGCTCTTGAACAGCTT GATCCTTCCGAATCGGCTTATGCGGATCTTGAAGCAATTCGAAAAGCCGCAGCACGTTCGGCGGGCTTGATCCGTCAACT GCTTGCTTTTGCAAGAAAGCAGACCGTGATGCCGAAAATTATTTCGTTGAATACGATGGTTGAAGGGATGCTCACCATGA TGCGGCGCTTGATTGGTGAAAATATTACCCTTGTCTGGATACCTGAAAATCAGAATGCCAAGATCAAGATCGATCCATCA CAGATCGATCAGATACTTGCCAACCTTTGTGTCAATGCTCGTGACTCTATTGTCGGAGGAGGGAGAATTACCATTGAAAC CGGCAGGCTGTGCGTGCAGAGAAACGAAAACACAGCCAACCATCCATGCAGGATACCCGGAGACTATGTGACGCTTGCGG TTACCGATAATGGCAGCGGGATCGACAAGAAGCATCTCCCGCATATTTTCGAGCCGTTTTTTACCACCAAGGAACAAGGG AAAGGGACGGGTCTCGGGTTATCTACGGTTTATGGTATTGTCAAACAGAATAACGGTTGTATTGACTGTCAGAGTGAGCC TGGTAAAGGGACATGCATCAAAATTCACTTGCCGAGGTATATCGATAAAGCCGATTCGGTACCGGTAGAGACGCCCGAGC AGAGTATTACAAGAGGGAAGGAGACGATACTCCTTGTTGAAGATGAACCTGATATTCTTAAACTTTGCAAGCTGATGCTT GAGAATAATGGTTATACGGTACTTTCAGCCGATACTCCAAATGAGGCTATTCGGATAGCAGCAAAACACAAGGGCGGGAT AGGATTGCTTTTAACGGATGTGGTTATGCCTGAAATGAATGGCTGCGATCTTTCGAACAAGCTCCGCATTACCAGTCCGA ATCTTAAAACCCTGTTCATGTCGGGATATACAGCTGATATTATATCCCGTCACGGAGTACTCGATGACGGTGGAGATTTT ATTCAGAAGCCTTTTTCCCTGAAAGCCCTCATGGAAAGCGTGCATAATCTGCTGAAGCCTTCCTCTTCGTAA
Upstream 100 bases:
>100_bases AATGCATCAAGATTGTTGGATACTATTGTTATGGTCGCATGTTTTCATGTAACTGCGTCGTTGACTATTCGGAAATGTCC AGTATATAAAACAGAGACTT
Downstream 100 bases:
>100_bases CTGCTTTTTAGCGCCTTTTTCCTGTCACGGAAAGATAATTCCCGTAAGTATCGCGGTCAACGTTTTCGAGTCTCTCTGTT GCTTTCTGAGGATGACGGGA
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 823; Mature: 823
Protein sequence:
>823_residues MHEDNNKREALSGSPVIMNAEQVYAISRQQLQLFMSATHAGIWEWDTVTNSVIWSDEVWALYGLNASCCDATFEAWLSSV HPEDREKTEKTVLGAARDDVAFEVAWRSRDLDGNERWLMSKGFPLRDGAGRTGRYVGIVLDITDRKQAEDALCESEDRFR KLFESLSEIKLIIDSHSGKIIDANQAAVDFYGWSIEELTSMNIEQINTTSSELVTLDTEKCGSLHQSCVSFRHRRADGSI RDVEVFSNNIEIAGNILYYSTIHDVTERKRFEALTAFRLRLLDMAENRSVEELLKATLDESECMTESSFSFCCFLMDERS SPTLQVLSTSTEKAMSLMNRNQEVFSQLSESSIWSAAILEKKAVIHNDVERDLPEDHPFFKRKLVVPIVQGDTVMAIIGV GNKQYPYDEDDARWVGTLADVAWDIVARKRAELSEKNTQEALSQSQKMEMVGRLAGGIAHDFNNMLGVILGHTEIALEQL DPSESAYADLEAIRKAAARSAGLIRQLLAFARKQTVMPKIISLNTMVEGMLTMMRRLIGENITLVWIPENQNAKIKIDPS QIDQILANLCVNARDSIVGGGRITIETGRLCVQRNENTANHPCRIPGDYVTLAVTDNGSGIDKKHLPHIFEPFFTTKEQG KGTGLGLSTVYGIVKQNNGCIDCQSEPGKGTCIKIHLPRYIDKADSVPVETPEQSITRGKETILLVEDEPDILKLCKLML ENNGYTVLSADTPNEAIRIAAKHKGGIGLLLTDVVMPEMNGCDLSNKLRITSPNLKTLFMSGYTADIISRHGVLDDGGDF IQKPFSLKALMESVHNLLKPSSS
Sequences:
>Translated_823_residues MHEDNNKREALSGSPVIMNAEQVYAISRQQLQLFMSATHAGIWEWDTVTNSVIWSDEVWALYGLNASCCDATFEAWLSSV HPEDREKTEKTVLGAARDDVAFEVAWRSRDLDGNERWLMSKGFPLRDGAGRTGRYVGIVLDITDRKQAEDALCESEDRFR KLFESLSEIKLIIDSHSGKIIDANQAAVDFYGWSIEELTSMNIEQINTTSSELVTLDTEKCGSLHQSCVSFRHRRADGSI RDVEVFSNNIEIAGNILYYSTIHDVTERKRFEALTAFRLRLLDMAENRSVEELLKATLDESECMTESSFSFCCFLMDERS SPTLQVLSTSTEKAMSLMNRNQEVFSQLSESSIWSAAILEKKAVIHNDVERDLPEDHPFFKRKLVVPIVQGDTVMAIIGV GNKQYPYDEDDARWVGTLADVAWDIVARKRAELSEKNTQEALSQSQKMEMVGRLAGGIAHDFNNMLGVILGHTEIALEQL DPSESAYADLEAIRKAAARSAGLIRQLLAFARKQTVMPKIISLNTMVEGMLTMMRRLIGENITLVWIPENQNAKIKIDPS QIDQILANLCVNARDSIVGGGRITIETGRLCVQRNENTANHPCRIPGDYVTLAVTDNGSGIDKKHLPHIFEPFFTTKEQG KGTGLGLSTVYGIVKQNNGCIDCQSEPGKGTCIKIHLPRYIDKADSVPVETPEQSITRGKETILLVEDEPDILKLCKLML ENNGYTVLSADTPNEAIRIAAKHKGGIGLLLTDVVMPEMNGCDLSNKLRITSPNLKTLFMSGYTADIISRHGVLDDGGDF IQKPFSLKALMESVHNLLKPSSS >Mature_823_residues MHEDNNKREALSGSPVIMNAEQVYAISRQQLQLFMSATHAGIWEWDTVTNSVIWSDEVWALYGLNASCCDATFEAWLSSV HPEDREKTEKTVLGAARDDVAFEVAWRSRDLDGNERWLMSKGFPLRDGAGRTGRYVGIVLDITDRKQAEDALCESEDRFR KLFESLSEIKLIIDSHSGKIIDANQAAVDFYGWSIEELTSMNIEQINTTSSELVTLDTEKCGSLHQSCVSFRHRRADGSI RDVEVFSNNIEIAGNILYYSTIHDVTERKRFEALTAFRLRLLDMAENRSVEELLKATLDESECMTESSFSFCCFLMDERS SPTLQVLSTSTEKAMSLMNRNQEVFSQLSESSIWSAAILEKKAVIHNDVERDLPEDHPFFKRKLVVPIVQGDTVMAIIGV GNKQYPYDEDDARWVGTLADVAWDIVARKRAELSEKNTQEALSQSQKMEMVGRLAGGIAHDFNNMLGVILGHTEIALEQL DPSESAYADLEAIRKAAARSAGLIRQLLAFARKQTVMPKIISLNTMVEGMLTMMRRLIGENITLVWIPENQNAKIKIDPS QIDQILANLCVNARDSIVGGGRITIETGRLCVQRNENTANHPCRIPGDYVTLAVTDNGSGIDKKHLPHIFEPFFTTKEQG KGTGLGLSTVYGIVKQNNGCIDCQSEPGKGTCIKIHLPRYIDKADSVPVETPEQSITRGKETILLVEDEPDILKLCKLML ENNGYTVLSADTPNEAIRIAAKHKGGIGLLLTDVVMPEMNGCDLSNKLRITSPNLKTLFMSGYTADIISRHGVLDDGGDF IQKPFSLKALMESVHNLLKPSSS
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=258, Percent_Identity=29.8449612403101, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=29.9595141700405, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI1788713, Length=220, Percent_Identity=31.3636363636364, Blast_Score=84, Evalue=5e-17, Organism=Escherichia coli, GI87081816, Length=265, Percent_Identity=26.7924528301887, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI48994928, Length=266, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1790300, Length=257, Percent_Identity=29.1828793774319, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87081881, Length=117, Percent_Identity=35.042735042735, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788381, Length=177, Percent_Identity=28.2485875706215, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786600, Length=256, Percent_Identity=25, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI145693157, Length=274, Percent_Identity=23.3576642335766, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91652; Mature: 91652
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEDNNKREALSGSPVIMNAEQVYAISRQQLQLFMSATHAGIWEWDTVTNSVIWSDEVWA CCCCCCCHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCEEE LYGLNASCCDATFEAWLSSVHPEDREKTEKTVLGAARDDVAFEVAWRSRDLDGNERWLMS EECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEE KGFPLRDGAGRTGRYVGIVLDITDRKQAEDALCESEDRFRKLFESLSEIKLIIDSHSGKI CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCCCE IDANQAAVDFYGWSIEELTSMNIEQINTTSSELVTLDTEKCGSLHQSCVSFRHRRADGSI EECCCCEEEECCCCHHHHHCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCC RDVEVFSNNIEIAGNILYYSTIHDVTERKRFEALTAFRLRLLDMAENRSVEELLKATLDE EEEEEECCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH SECMTESSFSFCCFLMDERSSPTLQVLSTSTEKAMSLMNRNQEVFSQLSESSIWSAAILE HHHHCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KKAVIHNDVERDLPEDHPFFKRKLVVPIVQGDTVMAIIGVGNKQYPYDEDDARWVGTLAD HHHHHHCCHHHCCCCCCCHHHCEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHH VAWDIVARKRAELSEKNTQEALSQSQKMEMVGRLAGGIAHDFNNMLGVILGHTEIALEQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC DPSESAYADLEAIRKAAARSAGLIRQLLAFARKQTVMPKIISLNTMVEGMLTMMRRLIGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC NITLVWIPENQNAKIKIDPSQIDQILANLCVNARDSIVGGGRITIETGRLCVQRNENTAN CEEEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCEECCCEEEEEECCEEEECCCCCCC HPCRIPGDYVTLAVTDNGSGIDKKHLPHIFEPFFTTKEQGKGTGLGLSTVYGIVKQNNGC CCCCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCE IDCQSEPGKGTCIKIHLPRYIDKADSVPVETPEQSITRGKETILLVEDEPDILKLCKLML EECCCCCCCCCEEEEECCHHHCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHH ENNGYTVLSADTPNEAIRIAAKHKGGIGLLLTDVVMPEMNGCDLSNKLRITSPNLKTLFM CCCCEEEEECCCCCCEEEEEEECCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCEEEEE SGYTADIISRHGVLDDGGDFIQKPFSLKALMESVHNLLKPSSS CCCHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHEDNNKREALSGSPVIMNAEQVYAISRQQLQLFMSATHAGIWEWDTVTNSVIWSDEVWA CCCCCCCHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCEEE LYGLNASCCDATFEAWLSSVHPEDREKTEKTVLGAARDDVAFEVAWRSRDLDGNERWLMS EECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEE KGFPLRDGAGRTGRYVGIVLDITDRKQAEDALCESEDRFRKLFESLSEIKLIIDSHSGKI CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCCCE IDANQAAVDFYGWSIEELTSMNIEQINTTSSELVTLDTEKCGSLHQSCVSFRHRRADGSI EECCCCEEEECCCCHHHHHCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCC RDVEVFSNNIEIAGNILYYSTIHDVTERKRFEALTAFRLRLLDMAENRSVEELLKATLDE EEEEEECCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH SECMTESSFSFCCFLMDERSSPTLQVLSTSTEKAMSLMNRNQEVFSQLSESSIWSAAILE HHHHCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KKAVIHNDVERDLPEDHPFFKRKLVVPIVQGDTVMAIIGVGNKQYPYDEDDARWVGTLAD HHHHHHCCHHHCCCCCCCHHHCEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHH VAWDIVARKRAELSEKNTQEALSQSQKMEMVGRLAGGIAHDFNNMLGVILGHTEIALEQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC DPSESAYADLEAIRKAAARSAGLIRQLLAFARKQTVMPKIISLNTMVEGMLTMMRRLIGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC NITLVWIPENQNAKIKIDPSQIDQILANLCVNARDSIVGGGRITIETGRLCVQRNENTAN CEEEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCEECCCEEEEEECCEEEECCCCCCC HPCRIPGDYVTLAVTDNGSGIDKKHLPHIFEPFFTTKEQGKGTGLGLSTVYGIVKQNNGC CCCCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCE IDCQSEPGKGTCIKIHLPRYIDKADSVPVETPEQSITRGKETILLVEDEPDILKLCKLML EECCCCCCCCCEEEEECCHHHCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHH ENNGYTVLSADTPNEAIRIAAKHKGGIGLLLTDVVMPEMNGCDLSNKLRITSPNLKTLFM CCCCEEEEECCCCCCEEEEEEECCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCEEEEE SGYTADIISRHGVLDDGGDFIQKPFSLKALMESVHNLLKPSSS CCCHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA