Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357350
Identifier: 119357350
GI number: 119357350
Start: 1757918
End: 1758490
Strand: Reverse
Name: 119357350
Synonym: Cpha266_1548
Alternate gene names: NA
Gene position: 1758490-1757918 (Counterclockwise)
Preceding gene: 119357351
Following gene: 119357349
Centisome position: 56.11
GC content: 43.98
Gene sequence:
>573_bases ATGTCGCTTGTTTCAATCGGTCGGGTTCTTGTAGAGAAAGAGGTGCTTCAGGCTTTTTTTTCCTGTGATCTTCATCAGTG TAAGGGAAGTTGTTGTGTTGAAGGCGAACTTGGTGCACCGCTTCATCCTCATGAAGCTCTCCGGCTTGAACAGATTTCGG AGGAAGTAGTTCGTATGCTTCCAGAGAAGAATATCCGTTATCTTCGCCGTCACGGTTCGGTTGAGGTTTATCAGGGATCG CATTATACCAAAACCATTGAAAACCGTGAGTGTGTTTTCAGTTGCATTGAAAATGGTATTACCTGGTGTGTTCTTGAAAA TGCATTCCGTCAAGGTTTGATCGAATTTGATAAACCGATATCCTGTCGCTTGTTTCCGATAAGGGTGAGGAAAAAATACG GTTTGGACTATCTTGTTTATGAAAAACTTCCGATGTGTTCTTTTGCGCGCCGAAAAGGCCGGGAGTGCGGGATAAAACTT GTTGACTATCTTTCAAGGGGGCTTGTGGAGTTATACGGTGATGACTGGACAGGAGGTCTCAAAACCTTTGCTGATTCTTC TTCCGATTCGTAA
Upstream 100 bases:
>100_bases ATGCTGTCGTTGTTACAGCCAGATCGTCATGTGACGAGGCTTGGCTGTAAACTGTTTTATTATTGCGTAAAAGGTGATCC GGTAACAATAGTTTTAATGT
Downstream 100 bases:
>100_bases TGGGCGACTTAAAACTTCAACTGAAACAAAAAGCGCTTCTTTCTGCCCAGCAGATTTTAGGCAGTCAGCTACTTCACCTT CCACTTGCCAATCTTGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSLVSIGRVLVEKEVLQAFFSCDLHQCKGSCCVEGELGAPLHPHEALRLEQISEEVVRMLPEKNIRYLRRHGSVEVYQGS HYTKTIENRECVFSCIENGITWCVLENAFRQGLIEFDKPISCRLFPIRVRKKYGLDYLVYEKLPMCSFARRKGRECGIKL VDYLSRGLVELYGDDWTGGLKTFADSSSDS
Sequences:
>Translated_190_residues MSLVSIGRVLVEKEVLQAFFSCDLHQCKGSCCVEGELGAPLHPHEALRLEQISEEVVRMLPEKNIRYLRRHGSVEVYQGS HYTKTIENRECVFSCIENGITWCVLENAFRQGLIEFDKPISCRLFPIRVRKKYGLDYLVYEKLPMCSFARRKGRECGIKL VDYLSRGLVELYGDDWTGGLKTFADSSSDS >Mature_189_residues SLVSIGRVLVEKEVLQAFFSCDLHQCKGSCCVEGELGAPLHPHEALRLEQISEEVVRMLPEKNIRYLRRHGSVEVYQGSH YTKTIENRECVFSCIENGITWCVLENAFRQGLIEFDKPISCRLFPIRVRKKYGLDYLVYEKLPMCSFARRKGRECGIKLV DYLSRGLVELYGDDWTGGLKTFADSSSDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21750; Mature: 21619
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVSIGRVLVEKEVLQAFFSCDLHQCKGSCCVEGELGAPLHPHEALRLEQISEEVVRML CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHC PEKNIRYLRRHGSVEVYQGSHYTKTIENRECVFSCIENGITWCVLENAFRQGLIEFDKPI CCCHHHHHHHCCCEEEEECCCCHHHHCCHHHHHHHHHCCCEEEEHHHHHHCCHHHCCCCC SCRLFPIRVRKKYGLDYLVYEKLPMCSFARRKGRECGIKLVDYLSRGLVELYGDDWTGGL CEEEEEEEEHHHHCCCEEEHHCCCHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCHH KTFADSSSDS HHHCCCCCCC >Mature Secondary Structure SLVSIGRVLVEKEVLQAFFSCDLHQCKGSCCVEGELGAPLHPHEALRLEQISEEVVRML CHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHC PEKNIRYLRRHGSVEVYQGSHYTKTIENRECVFSCIENGITWCVLENAFRQGLIEFDKPI CCCHHHHHHHCCCEEEEECCCCHHHHCCHHHHHHHHHCCCEEEEHHHHHHCCHHHCCCCC SCRLFPIRVRKKYGLDYLVYEKLPMCSFARRKGRECGIKLVDYLSRGLVELYGDDWTGGL CEEEEEEEEHHHHCCCEEEHHCCCHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCHH KTFADSSSDS HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA