Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357293
Identifier: 119357293
GI number: 119357293
Start: 1687238
End: 1688254
Strand: Direct
Name: 119357293
Synonym: Cpha266_1489
Alternate gene names: NA
Gene position: 1687238-1688254 (Clockwise)
Preceding gene: 119357289
Following gene: 119357321
Centisome position: 53.84
GC content: 48.28
Gene sequence:
>1017_bases ATGAGAGAACGAACAACTGAAATAAGAAACTACATGTTGACAGCTTGCAGGGACAGGTCGCTCAATGTCGCCGCGGAGAC TGCAAGGCATTTCAAAATCTCACGACAGGCGGCTTCACGGCACCTGCATGCACTCGAAGAAGCCGGACTCGTCAGATCGG AGGGGGCGAAAAACGTCAAAAAATCGACACTTATCCCTCTTAAGCAAACATCCTGGACATTCCTGTTGGCTGGCCTGAAA GAGGATGTGGTATGGCTTGAATCGATAGCTCCCCTGATTGCTGATTTGCCGGGTAATGTCCGCGAAATGTGGCAATACGG TGCGACAGAAATGATCAACAACGCTCTTGATCACTCAGAGGGACTTAACCTGTCAATTTACTTTTCAAGAAACGCAATAG ATTGCGAACTGACGATTACTGACGATGGCGAGGGCATCTTCCACCGTATTCAACGATTAACCGGCCTGTATGATGCACGG GAATCAATCCTTGAGCTTGCCAAGGGCAAGCTGACAACCGACCCGCAGAACCATTCCGGCGAAGGTATATTTTTTACATC GAGGGCATTCGACAGCTTCGTAATCATCTCAAGAAATCTGTACTTCACCCACCGGGCAGAAAAAGATGACTGGCTGATCG ATATCGACTCTGATACACCGGGCACGAGCATTTATCTCAGATTGAGCAACACCTGCCCTCGAACCATGAAGGAAATCTAT GACGAGTATGCCGAGCCGGACGAGTATGCCTTTAACAAAACAAGAGTTCCGGTAAAGCTGGCCCGATATGAGGAAGAAAA GCTCGTATCCCGATCGCAGGCAAAGAGGCTCGTATCGCGCTTCGAGAAGTTCTCAACCGTAATCCTTGATTTTGAAGACG TTGAAGAAATCGGACAAGCATTTGCAGACGAAATCTTCAGAGTATTTGCATCGAACCATCCCGAAGTGAAACTCATTACC GCTCATGCAACGGACGCCGTAAACAAAATGATTCTGAGAGCTCTGGCTGTCAGGTAA
Upstream 100 bases:
>100_bases CAAACCCTCCAGTTTAGTTGTCAACAAACCGCATTTATGTTGTCAAATATAATCATATATTATTCTCATCAATATAATAT GAATACGACATGGCGGGCAA
Downstream 100 bases:
>100_bases CCTTCCCCATCCGCAAACCGAAAAACAGCCTGTCTTCGTCACCCTCAACAATACTGTTACCCTCGATGCCCCGCGCCATC ACGTGATGCAGCGTACCCGG
Product: regulatory protein, ArsR
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MRERTTEIRNYMLTACRDRSLNVAAETARHFKISRQAASRHLHALEEAGLVRSEGAKNVKKSTLIPLKQTSWTFLLAGLK EDVVWLESIAPLIADLPGNVREMWQYGATEMINNALDHSEGLNLSIYFSRNAIDCELTITDDGEGIFHRIQRLTGLYDAR ESILELAKGKLTTDPQNHSGEGIFFTSRAFDSFVIISRNLYFTHRAEKDDWLIDIDSDTPGTSIYLRLSNTCPRTMKEIY DEYAEPDEYAFNKTRVPVKLARYEEEKLVSRSQAKRLVSRFEKFSTVILDFEDVEEIGQAFADEIFRVFASNHPEVKLIT AHATDAVNKMILRALAVR
Sequences:
>Translated_338_residues MRERTTEIRNYMLTACRDRSLNVAAETARHFKISRQAASRHLHALEEAGLVRSEGAKNVKKSTLIPLKQTSWTFLLAGLK EDVVWLESIAPLIADLPGNVREMWQYGATEMINNALDHSEGLNLSIYFSRNAIDCELTITDDGEGIFHRIQRLTGLYDAR ESILELAKGKLTTDPQNHSGEGIFFTSRAFDSFVIISRNLYFTHRAEKDDWLIDIDSDTPGTSIYLRLSNTCPRTMKEIY DEYAEPDEYAFNKTRVPVKLARYEEEKLVSRSQAKRLVSRFEKFSTVILDFEDVEEIGQAFADEIFRVFASNHPEVKLIT AHATDAVNKMILRALAVR >Mature_338_residues MRERTTEIRNYMLTACRDRSLNVAAETARHFKISRQAASRHLHALEEAGLVRSEGAKNVKKSTLIPLKQTSWTFLLAGLK EDVVWLESIAPLIADLPGNVREMWQYGATEMINNALDHSEGLNLSIYFSRNAIDCELTITDDGEGIFHRIQRLTGLYDAR ESILELAKGKLTTDPQNHSGEGIFFTSRAFDSFVIISRNLYFTHRAEKDDWLIDIDSDTPGTSIYLRLSNTCPRTMKEIY DEYAEPDEYAFNKTRVPVKLARYEEEKLVSRSQAKRLVSRFEKFSTVILDFEDVEEIGQAFADEIFRVFASNHPEVKLIT AHATDAVNKMILRALAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38601; Mature: 38601
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERTTEIRNYMLTACRDRSLNVAAETARHFKISRQAASRHLHALEEAGLVRSEGAKNVK CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH KSTLIPLKQTSWTFLLAGLKEDVVWLESIAPLIADLPGNVREMWQYGATEMINNALDHSE HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHCCCC GLNLSIYFSRNAIDCELTITDDGEGIFHRIQRLTGLYDARESILELAKGKLTTDPQNHSG CCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC EGIFFTSRAFDSFVIISRNLYFTHRAEKDDWLIDIDSDTPGTSIYLRLSNTCPRTMKEIY CEEEEECCCCCEEEEEECCEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHH DEYAEPDEYAFNKTRVPVKLARYEEEKLVSRSQAKRLVSRFEKFSTVILDFEDVEEIGQA HHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHH FADEIFRVFASNHPEVKLITAHATDAVNKMILRALAVR HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCC >Mature Secondary Structure MRERTTEIRNYMLTACRDRSLNVAAETARHFKISRQAASRHLHALEEAGLVRSEGAKNVK CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH KSTLIPLKQTSWTFLLAGLKEDVVWLESIAPLIADLPGNVREMWQYGATEMINNALDHSE HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHCCCC GLNLSIYFSRNAIDCELTITDDGEGIFHRIQRLTGLYDARESILELAKGKLTTDPQNHSG CCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC EGIFFTSRAFDSFVIISRNLYFTHRAEKDDWLIDIDSDTPGTSIYLRLSNTCPRTMKEIY CEEEEECCCCCEEEEEECCEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHH DEYAEPDEYAFNKTRVPVKLARYEEEKLVSRSQAKRLVSRFEKFSTVILDFEDVEEIGQA HHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHH FADEIFRVFASNHPEVKLITAHATDAVNKMILRALAVR HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA