Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357085
Identifier: 119357085
GI number: 119357085
Start: 1450990
End: 1451745
Strand: Direct
Name: 119357085
Synonym: Cpha266_1272
Alternate gene names: NA
Gene position: 1450990-1451745 (Clockwise)
Preceding gene: 119357083
Following gene: 119357086
Centisome position: 46.3
GC content: 48.02
Gene sequence:
>756_bases ATGTATCGCCAGATCCGCAATATTTTCAAATACATGAAGATCGCTCTCCTGCTTCTCTTCTGCACGTTTTTTATGCCCGA ACGGATATCAGCGGCAGCGGTTGAGAGCAGCAGTGATCAAGCGGCGGTATATCCCCAATTGAAAGCAAAAGCTTCGTCGC CAATCGGTTTCGTGCCGGAGGGCTGGAAACTCGAAAAAGAGTATCGCGATGATCTTAATGGCGACGGGATCATGGATCTT GTTGTGCTGCTGCGAAAGCAGCGAAAGCCGGATCTTCCGAAAAGCAGCGATACTTCGGAATTTGATTCGTTTGACACGAA ACCAAGAATACTTGCTGCCGCATTCGGCTCGTCTGCTGAACACGGGTTCACTCTTGTGATGCAGAACCATACCCTCATTC CTCTGCATGAATCTCCAGTCATGAGCGATCCCTTTTCAGAGCTCACCCTGAAAAGAGGAGTTATGAAAATCACCCTTGAA TCGTGGGCGAGCATGGGGTCATGGTATTCGTCGAACATCTCCTTCACCTTCCGATATCGCGAGAATTGCTTTAAATTGAT CGGTTATGACCGTTATGAGCTGCACAGAGGATCCGGAAGGGAGGTCGAAACAAGTATTAATTTTCAGACTGGCAGAAAAA ACGTGAGCAGTGGACTCGCTGATAAAAAACACCGTATCAAATCGAGCCGGTTTCAACGAAGCCCTCTGTCCTGTATTGAA AAGGTGGGTGAAGGGTTTGCCTTTGAAGCACCATAG
Upstream 100 bases:
>100_bases CGACAACTCCCGAAATCGTAAAAAGAAGTCAAATACAGCTCTGACGGTTCGACAGCTCTCGCTGTAACAGCTCAACAGAA CTTAAATTACAAAAGCCTTT
Downstream 100 bases:
>100_bases CCTGCGAATATGAAAACAAAATCGGTTTCTCCTGCTGCTTCCGGCAGGGAAGCCGGGTAATGTTATGCGGAATAAGTGAT CCCATGCGGCACTCATCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MYRQIRNIFKYMKIALLLLFCTFFMPERISAAAVESSSDQAAVYPQLKAKASSPIGFVPEGWKLEKEYRDDLNGDGIMDL VVLLRKQRKPDLPKSSDTSEFDSFDTKPRILAAAFGSSAEHGFTLVMQNHTLIPLHESPVMSDPFSELTLKRGVMKITLE SWASMGSWYSSNISFTFRYRENCFKLIGYDRYELHRGSGREVETSINFQTGRKNVSSGLADKKHRIKSSRFQRSPLSCIE KVGEGFAFEAP
Sequences:
>Translated_251_residues MYRQIRNIFKYMKIALLLLFCTFFMPERISAAAVESSSDQAAVYPQLKAKASSPIGFVPEGWKLEKEYRDDLNGDGIMDL VVLLRKQRKPDLPKSSDTSEFDSFDTKPRILAAAFGSSAEHGFTLVMQNHTLIPLHESPVMSDPFSELTLKRGVMKITLE SWASMGSWYSSNISFTFRYRENCFKLIGYDRYELHRGSGREVETSINFQTGRKNVSSGLADKKHRIKSSRFQRSPLSCIE KVGEGFAFEAP >Mature_251_residues MYRQIRNIFKYMKIALLLLFCTFFMPERISAAAVESSSDQAAVYPQLKAKASSPIGFVPEGWKLEKEYRDDLNGDGIMDL VVLLRKQRKPDLPKSSDTSEFDSFDTKPRILAAAFGSSAEHGFTLVMQNHTLIPLHESPVMSDPFSELTLKRGVMKITLE SWASMGSWYSSNISFTFRYRENCFKLIGYDRYELHRGSGREVETSINFQTGRKNVSSGLADKKHRIKSSRFQRSPLSCIE KVGEGFAFEAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28522; Mature: 28522
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRQIRNIFKYMKIALLLLFCTFFMPERISAAAVESSSDQAAVYPQLKAKASSPIGFVPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHCCCCCCCCCCC GWKLEKEYRDDLNGDGIMDLVVLLRKQRKPDLPKSSDTSEFDSFDTKPRILAAAFGSSAE CCEECHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCC HGFTLVMQNHTLIPLHESPVMSDPFSELTLKRGVMKITLESWASMGSWYSSNISFTFRYR CCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHEEEHHHHHHHCCEECCCCEEEEEEH ENCFKLIGYDRYELHRGSGREVETSINFQTGRKNVSSGLADKKHRIKSSRFQRSPLSCIE HHHHHHHCCCHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH KVGEGFAFEAP HHCCCCCCCCC >Mature Secondary Structure MYRQIRNIFKYMKIALLLLFCTFFMPERISAAAVESSSDQAAVYPQLKAKASSPIGFVPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHCCCCCCCCCCC GWKLEKEYRDDLNGDGIMDLVVLLRKQRKPDLPKSSDTSEFDSFDTKPRILAAAFGSSAE CCEECHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCC HGFTLVMQNHTLIPLHESPVMSDPFSELTLKRGVMKITLESWASMGSWYSSNISFTFRYR CCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHEEEHHHHHHHCCEECCCCEEEEEEH ENCFKLIGYDRYELHRGSGREVETSINFQTGRKNVSSGLADKKHRIKSSRFQRSPLSCIE HHHHHHHCCCHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH KVGEGFAFEAP HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA