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The map label for this gene is yfdZ [H]

Identifier: 119357076

GI number: 119357076

Start: 1436576

End: 1437853

Strand: Direct

Name: yfdZ [H]

Synonym: Cpha266_1263

Alternate gene names: 119357076

Gene position: 1436576-1437853 (Clockwise)

Preceding gene: 119357075

Following gene: 119357081

Centisome position: 45.84

GC content: 47.26

Gene sequence:

>1278_bases
ATGCATAACACTGATGAATTTTTTTTGCACACTATTATGTTTGATGAAATTGAATTCGATAAAATCAAGCGACTTCCCAA
GTACGTTTTTGCTGCCGTTAATGAGCTGAAAATGGCTGAACGGCGGGCAGGGGAGGATGTGATTGACTTTTCCATGGGAA
ATCCCGATGGTCCGACACCGCAGCATATCGTTGACAAGCTGGTCGAGAGCATCAACAAACCCAGAACGCACGGCTATTCG
GTCTCGAAAGGCATATACAAACTTCGGGGCGCTGTGGGAACATGGTATAAGCGCAAATACAATGTTGATCTTGACCTCGA
TCGTGAGGTTGTTGCTACCATGGGCTCAAAAGAAGGCTATGTTCATCTTGTGCAGGCCATTACCAATCCCGGCGATCTTG
CCATGGTTCCGGATCCCTGCTATCCTATACACTCTCAGGCATTTATCCTTGCAGGAGGCAACGTTCACCGGTTAAAATTA
GAACTCAACGAGGACTATTCTCTTGATGAGGAGGGCTTTTTCAGAAATATTGAAACCGCACTAAGAGAATCTTCACCAAA
GCCGAAATTCCTTGTTGTCAATTTCCCCAACAATCCCACGACGGCCACGGTAGAGCTCTCTTTTTATAAAAAGCTGGTTG
ACATCGCGCGTGACGAGCGTTTTTATATTATCAGCGATATTGCCTATGCGGAAATAACGTATGACGGTTATCAGACACCC
TCGATTCTTCAGGTTCCCGGAGCAAAAGACGTGGCTGTTGAAAGCTACACGCTTTCAAAAACATACAACATGGCGGGCTG
GAGAGTAGGTTTTATGGTAGGTAACGCCAAACTGATCGGCGCTCTCGAAAAAATCAAGAGCTGGCTTGATTATGGCACCT
TTACGCCGATTCAGGTTGCTTCAACCATTGCCCTTACTGAAGATCAAAGTTGTGTCCGGCAAATCTGCGAGGTATACCAC
AAGCGGCGTGATGTTATGGTTAAAAGCTTTTCAAATGCCGGCTGGCAGGTAACGGCGCCGAAAGCAAGTATGTTCATCTG
GGCAAGAATTCCTGAGCCCTTCCGCAGTGCGGGGAGTCTGGAATTCAGCAAAAAGCTGCTGACGGAAGGAAAAGTCGCGG
TAAGTCCCGGTATCGGTTTTGGTGCTTATGGAGACGAATACGTTCGGGTAGCCATGATTGAAAATGAGGAGAGAATAAGA
CAGGCCGCAAGAAATATCAGGAAATTCCTCAGGGATCATGACGCGTTGCCGGGCGATGCGCCTCCGTTTCAGTCATAG

Upstream 100 bases:

>100_bases
GTTCATCAGTTTCATTATCTGTTTTTTTTTAGGATATTTGCTCACTTCTTTCATCCGGGATTGCGGAGAAGAGCGGCATT
TTGTTTATGATTGCAGAACG

Downstream 100 bases:

>100_bases
GGGCGCCCCGTTACGTTGTTCTTTTTGCTGATGTCAAAGGCCTGGCGGGGTATCGGGTTTGCCGCGTATGCTTGACAGGG
ACGGAACCCCGGTCGCTTTT

Product: aspartate aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MHNTDEFFLHTIMFDEIEFDKIKRLPKYVFAAVNELKMAERRAGEDVIDFSMGNPDGPTPQHIVDKLVESINKPRTHGYS
VSKGIYKLRGAVGTWYKRKYNVDLDLDREVVATMGSKEGYVHLVQAITNPGDLAMVPDPCYPIHSQAFILAGGNVHRLKL
ELNEDYSLDEEGFFRNIETALRESSPKPKFLVVNFPNNPTTATVELSFYKKLVDIARDERFYIISDIAYAEITYDGYQTP
SILQVPGAKDVAVESYTLSKTYNMAGWRVGFMVGNAKLIGALEKIKSWLDYGTFTPIQVASTIALTEDQSCVRQICEVYH
KRRDVMVKSFSNAGWQVTAPKASMFIWARIPEPFRSAGSLEFSKKLLTEGKVAVSPGIGFGAYGDEYVRVAMIENEERIR
QAARNIRKFLRDHDALPGDAPPFQS

Sequences:

>Translated_425_residues
MHNTDEFFLHTIMFDEIEFDKIKRLPKYVFAAVNELKMAERRAGEDVIDFSMGNPDGPTPQHIVDKLVESINKPRTHGYS
VSKGIYKLRGAVGTWYKRKYNVDLDLDREVVATMGSKEGYVHLVQAITNPGDLAMVPDPCYPIHSQAFILAGGNVHRLKL
ELNEDYSLDEEGFFRNIETALRESSPKPKFLVVNFPNNPTTATVELSFYKKLVDIARDERFYIISDIAYAEITYDGYQTP
SILQVPGAKDVAVESYTLSKTYNMAGWRVGFMVGNAKLIGALEKIKSWLDYGTFTPIQVASTIALTEDQSCVRQICEVYH
KRRDVMVKSFSNAGWQVTAPKASMFIWARIPEPFRSAGSLEFSKKLLTEGKVAVSPGIGFGAYGDEYVRVAMIENEERIR
QAARNIRKFLRDHDALPGDAPPFQS
>Mature_425_residues
MHNTDEFFLHTIMFDEIEFDKIKRLPKYVFAAVNELKMAERRAGEDVIDFSMGNPDGPTPQHIVDKLVESINKPRTHGYS
VSKGIYKLRGAVGTWYKRKYNVDLDLDREVVATMGSKEGYVHLVQAITNPGDLAMVPDPCYPIHSQAFILAGGNVHRLKL
ELNEDYSLDEEGFFRNIETALRESSPKPKFLVVNFPNNPTTATVELSFYKKLVDIARDERFYIISDIAYAEITYDGYQTP
SILQVPGAKDVAVESYTLSKTYNMAGWRVGFMVGNAKLIGALEKIKSWLDYGTFTPIQVASTIALTEDQSCVRQICEVYH
KRRDVMVKSFSNAGWQVTAPKASMFIWARIPEPFRSAGSLEFSKKLLTEGKVAVSPGIGFGAYGDEYVRVAMIENEERIR
QAARNIRKFLRDHDALPGDAPPFQS

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=398, Percent_Identity=21.608040201005, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI169881279, Length=398, Percent_Identity=21.608040201005, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI56713256, Length=407, Percent_Identity=20.6388206388206, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI56713254, Length=407, Percent_Identity=20.6388206388206, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI169881281, Length=282, Percent_Identity=22.6950354609929, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI7705897, Length=263, Percent_Identity=24.7148288973384, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI33469970, Length=263, Percent_Identity=24.7148288973384, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1788722, Length=405, Percent_Identity=55.3086419753086, Blast_Score=475, Evalue=1e-135,
Organism=Escherichia coli, GI1786816, Length=391, Percent_Identity=23.0179028132992, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788627, Length=402, Percent_Identity=27.6119402985075, Blast_Score=109, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17567369, Length=397, Percent_Identity=22.4181360201511, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71994476, Length=402, Percent_Identity=23.3830845771144, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71994472, Length=402, Percent_Identity=23.3830845771144, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17567663, Length=382, Percent_Identity=24.0837696335079, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6322401, Length=400, Percent_Identity=21, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6323118, Length=342, Percent_Identity=22.8070175438596, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573069, Length=399, Percent_Identity=22.3057644110276, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24646114, Length=399, Percent_Identity=22.3057644110276, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI28573067, Length=399, Percent_Identity=22.3057644110276, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI28573065, Length=399, Percent_Identity=22.3057644110276, Blast_Score=99, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 47967; Mature: 47967

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNTDEFFLHTIMFDEIEFDKIKRLPKYVFAAVNELKMAERRAGEDVIDFSMGNPDGPTP
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH
QHIVDKLVESINKPRTHGYSVSKGIYKLRGAVGTWYKRKYNVDLDLDREVVATMGSKEGY
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCH
VHLVQAITNPGDLAMVPDPCYPIHSQAFILAGGNVHRLKLELNEDYSLDEEGFFRNIETA
HHEEHHHCCCCCEEECCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHH
LRESSPKPKFLVVNFPNNPTTATVELSFYKKLVDIARDERFYIISDIAYAEITYDGYQTP
HHCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECEEEEEEEECCCCCC
SILQVPGAKDVAVESYTLSKTYNMAGWRVGFMVGNAKLIGALEKIKSWLDYGTFTPIQVA
CEEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHH
STIALTEDQSCVRQICEVYHKRRDVMVKSFSNAGWQVTAPKASMFIWARIPEPFRSAGSL
HEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHHCCCCH
EFSKKLLTEGKVAVSPGIGFGAYGDEYVRVAMIENEERIRQAARNIRKFLRDHDALPGDA
HHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCC
PPFQS
CCCCC
>Mature Secondary Structure
MHNTDEFFLHTIMFDEIEFDKIKRLPKYVFAAVNELKMAERRAGEDVIDFSMGNPDGPTP
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH
QHIVDKLVESINKPRTHGYSVSKGIYKLRGAVGTWYKRKYNVDLDLDREVVATMGSKEGY
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCH
VHLVQAITNPGDLAMVPDPCYPIHSQAFILAGGNVHRLKLELNEDYSLDEEGFFRNIETA
HHEEHHHCCCCCEEECCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHH
LRESSPKPKFLVVNFPNNPTTATVELSFYKKLVDIARDERFYIISDIAYAEITYDGYQTP
HHCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECEEEEEEEECCCCCC
SILQVPGAKDVAVESYTLSKTYNMAGWRVGFMVGNAKLIGALEKIKSWLDYGTFTPIQVA
CEEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHH
STIALTEDQSCVRQICEVYHKRRDVMVKSFSNAGWQVTAPKASMFIWARIPEPFRSAGSL
HEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHHCCCCH
EFSKKLLTEGKVAVSPGIGFGAYGDEYVRVAMIENEERIRQAARNIRKFLRDHDALPGDA
HHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCC
PPFQS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]