Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357026
Identifier: 119357026
GI number: 119357026
Start: 1378845
End: 1379195
Strand: Direct
Name: 119357026
Synonym: Cpha266_1211
Alternate gene names: NA
Gene position: 1378845-1379195 (Clockwise)
Preceding gene: 119357023
Following gene: 119357027
Centisome position: 44.0
GC content: 49.0
Gene sequence:
>351_bases ATGAGTGGGGCAGCAAAAACAAACAAGAGTGTCGGCACTCTCAAGTCTGCTGCCCGGAAAGATGCAAAGCAAAGCAGTGA GAGCAAAGCCCGTCTTGAAGCGAGAATCTCCAGGGCAACCCATACCCGGATAAAACTTGCTTCTGACATTCAGGGAAGAA CAGTAACCGATTTTGTCGTACATGCCGCTCTCGAAGCTGCCACAAAGACAATAGAAGAGAATTTTGTTGTTCAGTTGTCA ATGGAGGGACAAGAGGCTTTTGCCGAAGCCCTGCTGAATCCACCGGAACCAAATGACGCTCTTCGACGTGCTTTCGAAAG GCATGCGGTACTTACAGGAAAGAACGACTGA
Upstream 100 bases:
>100_bases GCCGTACAAAACAAGAGCCATCATGAAAACGAACGTAAAAGAACAAGGTAAAACCGCCACTCCAAAATCATCCGATACCG GAACAAGGCAGTCAAAGAGC
Downstream 100 bases:
>100_bases CCGGTCATCACTGCATATGAATGTCCCACGATTTTCGATCATCCCCTTCAACCGCGAACATCAGAAATCTGGATTCTGCT GCGGTTCAAGCCTGCTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSGAAKTNKSVGTLKSAARKDAKQSSESKARLEARISRATHTRIKLASDIQGRTVTDFVVHAALEAATKTIEENFVVQLS MEGQEAFAEALLNPPEPNDALRRAFERHAVLTGKND
Sequences:
>Translated_116_residues MSGAAKTNKSVGTLKSAARKDAKQSSESKARLEARISRATHTRIKLASDIQGRTVTDFVVHAALEAATKTIEENFVVQLS MEGQEAFAEALLNPPEPNDALRRAFERHAVLTGKND >Mature_115_residues SGAAKTNKSVGTLKSAARKDAKQSSESKARLEARISRATHTRIKLASDIQGRTVTDFVVHAALEAATKTIEENFVVQLSM EGQEAFAEALLNPPEPNDALRRAFERHAVLTGKND
Specific function: Unknown
COG id: COG4453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014795 - InterPro: IPR010985 [H]
Pfam domain/function: PF08681 DUF1778 [H]
EC number: NA
Molecular weight: Translated: 12575; Mature: 12444
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAAKTNKSVGTLKSAARKDAKQSSESKARLEARISRATHTRIKLASDIQGRTVTDFVV CCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH HAALEAATKTIEENFVVQLSMEGQEAFAEALLNPPEPNDALRRAFERHAVLTGKND HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SGAAKTNKSVGTLKSAARKDAKQSSESKARLEARISRATHTRIKLASDIQGRTVTDFVV CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH HAALEAATKTIEENFVVQLSMEGQEAFAEALLNPPEPNDALRRAFERHAVLTGKND HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]