Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357018
Identifier: 119357018
GI number: 119357018
Start: 1362998
End: 1365739
Strand: Direct
Name: 119357018
Synonym: Cpha266_1202
Alternate gene names: NA
Gene position: 1362998-1365739 (Clockwise)
Preceding gene: 119357017
Following gene: 119357022
Centisome position: 43.49
GC content: 48.18
Gene sequence:
>2742_bases ATGAACTGTTTTCTTAAAGGCGTTTCCTTTTTTGCAATCTCGTTGATCACAACAGCAGGCTCTCTTTCTGCAATTGCGAA GCCCACAAAAATTCCCGCTGAACAGCTTGAAGGGAAACAGGTCGTCATCGTGATTCCCGGTCAGGAGTACGAAGCAGGCG CCCTGCATACGCTGATTTTTGGAACGCATTGGCGATCGCTTTGGACGACTCCCGTTGAGATTATGATTCTTGATCTCAAA TCGTTTGCCGGTGGAGTTGTTCCATTTGAAAAAGGCGGGGGATTTCAGACGAAAACGTTGAGCTTCAGGGGCGCAGACGG AAAAGAGTATCGATTCAGGTCTCTTGACAAAGATCCAGCGAGAGGGATACCTTCCAAGCTGCAAAATACCGTTGTTTCAG CGGTTGTCGAGGATCAGGTTTCTTCTTCAAATCCTGTTTCCGCTCTTGTTGTTTCGCCCTTGCTTGAGGCTGCCGGCACG TATCAGGTAACTCCGGAACTGACGGTTCTACCCTATGACAAGGGTGTTCTCGGGGAGTATTACGATGAATTTGCAGGACT TGCAGGAACAATAGAAGAGCGTCCTGCTGAAAGCGACACTGCTGGAGCAGGATTTAAGGGTGCCGACAAAATCTCCGGTA CCTATGCCGTATTCAATAATCTCGAAAAAGATAACGACAATCAAGTCGATCAGTCGGCCTATCTGCGGGCAAGGCTGATT GATCTTTTTATCGGCGACTGGGATCGACATTCCGATCAATGGAAATGGGCCGGTTACAAAAAAGAGGGGAAAACACGCTG GGTGCCTATCCCGAGAGACAGGGATCATGCCTTTTCAAGGCAGGATGGCGTTTTTTCATGGATAATAACAAGAGTCATGC CCCGAATGACCGGTTTCAAGTCAACATACCCCTCTGTTAAACATTTGACGCTCTCTGCCCGTCATCTTGACCGGCGTCTT CTGTCAGGAATCGACAGGGCCGAGTGGGATGCGATTACCGGAGATGTTCAAGAGAAGCTTACAGACAGTGTGATCAGTGA GGCAGTCAGAAAGATGCCCCCGGCGATGTATGAAAAAGAGGGCGCTCAACTGGAGCATGATCTCAGGACAAGAAGGGATC TGCTCAAAGCGGCATCACATGAACTCTATCTGCTCTATGCAGAGGATGTGGATATTTATGCAAGCAACAAACCTGAATAT GCAGGGGTGCGTCGTATGCCGGACGGACAGGTTGAGGTTGCCGTTTCAAAAAGAGATGCAGTAACAGGAGCGGAAAAAGG AAACCCGTTTTATTTTCGTCGCTTCAATCCTCTCGAAACCGAAGAGGTACGCATCTATCTTCAGGGAGGCGATGACAGGG TTGTTGTTCAGGGCCCTGTTTGCAAGGATGGGGTAAAGGTCAGGGTTATCGGAGGTGAAGGTCAGGATTTCTTTGAAGAT CAATCTGAAAAAGCTCTTTCCGGATATCCGCATACCGCTGAAAAAATGACCTTTTTTTATGATGACGGAAAAAAATCGGA ATTTACGGACGGAGCCTACACCTCGGTTGATCAGCATACGGCTGCGGAACCTGCTGATGATGAGGAAAAATATGATCTTC GTGACAGGGATTCAGGACGGGAGACTGGCATGCATCCTCTTGTCGGGTACTCTCCTGACTCGGGAGTTTTTCTCGGATTG GGGGTAACGGTTGCAGATTACGGATTCAGATCGGCCCCTTATCGTTACAAGATTGATGTGAGCGGAGGAGTTGCCTACGG AAAAAATGATTTTCGCAACAAACTGCAGTTCAAGGGCGATTTCCGGACAGTGCTGAGAAATGCCTCTCTTCTGGTTGAAG CTGGCAGTTCCGGTCTTGATCTGATTAATTTTTACGGACTTGGAAACGAGCGATACTATCATGGCAGCAGTCTCAGGGAA GATGACTTTGAAATTGTCAATACCATCAACTCCATCAGGACTTCATTACGTTATCCGATGGATAAACAGTATAACTGGAG TGCAGGAATAAGTGCCAAATGGATGGATCTTGTTGTTCAGCAAGGCTCATTTATTGACCTCTACAGATCAGAGTTTCCAG GAATCGATCGGCAGTTTGTTGGTGGTGTACATCTTGGTTTTCATTATGATTCACGAGATTGCGGCGACGCAATTGCGCTG TCGCCCGGAAAAAAGCTCCGTTTTTCAGGAGGGGGAGAGCCACTCGGAAATACAACGGCACTTCAGGGAACCATGCTTGA TGTTGAGGGGAGTTACTATCCTGAATTTTTTGGTAATGAAAAGGCATTCGGAAAAATCCGGGGTGAAGTGAGAACCTATA TTCCCCTTGTTTCTTCCCGATATTCAAGAGTTGCCTTGCGGGCAGGGGGAGAGAAAATTTGGGGAGACTATCCTTTTTAT GAGGCGGCATTTGTTGGCGGAACTCATCTTCTGAGAGGGTACGATAAACAGCGGTTTGCCGGAGATGCATCGCTCTACGC AGGTTCCGAACTTCGTTTGTATTTCGGCACCTTCAAATTTCTTGTTCCCGTTATGTATGGTCCACTTGCTTTTATTGAGA CTGGCAGAGTGTTTCTGAAGGGCGAAGACTCCGGCGCATGGCACACCAGTGTCGGCGGCGGATTGTGGCTGGGATTCATC GAGTCACGCTACACGGCAAGCATCTCTTTTGCAAAGGGGCTTGACGACGGGCAGTTGATGGATGATTACGGTATCTACAT CGGTACCGGATTCACCTTTTAG
Upstream 100 bases:
>100_bases AAAACAGTTATGAGAAACGGGTGTGATGTTCTGAAAAAAGGAACGGAGAGGGGGCGAGGCTCAATATCGACATGTTTTAC TCTATAAAAAAGATGATGTT
Downstream 100 bases:
>100_bases GGTTCTATGCACGCCAAGGGGGGATTATGCCCCTGGCGCAGAGGAGATCGCCTTATATCCATCAATCCTGACACCGAACA ATCAAAAACGCATCAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MNCFLKGVSFFAISLITTAGSLSAIAKPTKIPAEQLEGKQVVIVIPGQEYEAGALHTLIFGTHWRSLWTTPVEIMILDLK SFAGGVVPFEKGGGFQTKTLSFRGADGKEYRFRSLDKDPARGIPSKLQNTVVSAVVEDQVSSSNPVSALVVSPLLEAAGT YQVTPELTVLPYDKGVLGEYYDEFAGLAGTIEERPAESDTAGAGFKGADKISGTYAVFNNLEKDNDNQVDQSAYLRARLI DLFIGDWDRHSDQWKWAGYKKEGKTRWVPIPRDRDHAFSRQDGVFSWIITRVMPRMTGFKSTYPSVKHLTLSARHLDRRL LSGIDRAEWDAITGDVQEKLTDSVISEAVRKMPPAMYEKEGAQLEHDLRTRRDLLKAASHELYLLYAEDVDIYASNKPEY AGVRRMPDGQVEVAVSKRDAVTGAEKGNPFYFRRFNPLETEEVRIYLQGGDDRVVVQGPVCKDGVKVRVIGGEGQDFFED QSEKALSGYPHTAEKMTFFYDDGKKSEFTDGAYTSVDQHTAAEPADDEEKYDLRDRDSGRETGMHPLVGYSPDSGVFLGL GVTVADYGFRSAPYRYKIDVSGGVAYGKNDFRNKLQFKGDFRTVLRNASLLVEAGSSGLDLINFYGLGNERYYHGSSLRE DDFEIVNTINSIRTSLRYPMDKQYNWSAGISAKWMDLVVQQGSFIDLYRSEFPGIDRQFVGGVHLGFHYDSRDCGDAIAL SPGKKLRFSGGGEPLGNTTALQGTMLDVEGSYYPEFFGNEKAFGKIRGEVRTYIPLVSSRYSRVALRAGGEKIWGDYPFY EAAFVGGTHLLRGYDKQRFAGDASLYAGSELRLYFGTFKFLVPVMYGPLAFIETGRVFLKGEDSGAWHTSVGGGLWLGFI ESRYTASISFAKGLDDGQLMDDYGIYIGTGFTF
Sequences:
>Translated_913_residues MNCFLKGVSFFAISLITTAGSLSAIAKPTKIPAEQLEGKQVVIVIPGQEYEAGALHTLIFGTHWRSLWTTPVEIMILDLK SFAGGVVPFEKGGGFQTKTLSFRGADGKEYRFRSLDKDPARGIPSKLQNTVVSAVVEDQVSSSNPVSALVVSPLLEAAGT YQVTPELTVLPYDKGVLGEYYDEFAGLAGTIEERPAESDTAGAGFKGADKISGTYAVFNNLEKDNDNQVDQSAYLRARLI DLFIGDWDRHSDQWKWAGYKKEGKTRWVPIPRDRDHAFSRQDGVFSWIITRVMPRMTGFKSTYPSVKHLTLSARHLDRRL LSGIDRAEWDAITGDVQEKLTDSVISEAVRKMPPAMYEKEGAQLEHDLRTRRDLLKAASHELYLLYAEDVDIYASNKPEY AGVRRMPDGQVEVAVSKRDAVTGAEKGNPFYFRRFNPLETEEVRIYLQGGDDRVVVQGPVCKDGVKVRVIGGEGQDFFED QSEKALSGYPHTAEKMTFFYDDGKKSEFTDGAYTSVDQHTAAEPADDEEKYDLRDRDSGRETGMHPLVGYSPDSGVFLGL GVTVADYGFRSAPYRYKIDVSGGVAYGKNDFRNKLQFKGDFRTVLRNASLLVEAGSSGLDLINFYGLGNERYYHGSSLRE DDFEIVNTINSIRTSLRYPMDKQYNWSAGISAKWMDLVVQQGSFIDLYRSEFPGIDRQFVGGVHLGFHYDSRDCGDAIAL SPGKKLRFSGGGEPLGNTTALQGTMLDVEGSYYPEFFGNEKAFGKIRGEVRTYIPLVSSRYSRVALRAGGEKIWGDYPFY EAAFVGGTHLLRGYDKQRFAGDASLYAGSELRLYFGTFKFLVPVMYGPLAFIETGRVFLKGEDSGAWHTSVGGGLWLGFI ESRYTASISFAKGLDDGQLMDDYGIYIGTGFTF >Mature_913_residues MNCFLKGVSFFAISLITTAGSLSAIAKPTKIPAEQLEGKQVVIVIPGQEYEAGALHTLIFGTHWRSLWTTPVEIMILDLK SFAGGVVPFEKGGGFQTKTLSFRGADGKEYRFRSLDKDPARGIPSKLQNTVVSAVVEDQVSSSNPVSALVVSPLLEAAGT YQVTPELTVLPYDKGVLGEYYDEFAGLAGTIEERPAESDTAGAGFKGADKISGTYAVFNNLEKDNDNQVDQSAYLRARLI DLFIGDWDRHSDQWKWAGYKKEGKTRWVPIPRDRDHAFSRQDGVFSWIITRVMPRMTGFKSTYPSVKHLTLSARHLDRRL LSGIDRAEWDAITGDVQEKLTDSVISEAVRKMPPAMYEKEGAQLEHDLRTRRDLLKAASHELYLLYAEDVDIYASNKPEY AGVRRMPDGQVEVAVSKRDAVTGAEKGNPFYFRRFNPLETEEVRIYLQGGDDRVVVQGPVCKDGVKVRVIGGEGQDFFED QSEKALSGYPHTAEKMTFFYDDGKKSEFTDGAYTSVDQHTAAEPADDEEKYDLRDRDSGRETGMHPLVGYSPDSGVFLGL GVTVADYGFRSAPYRYKIDVSGGVAYGKNDFRNKLQFKGDFRTVLRNASLLVEAGSSGLDLINFYGLGNERYYHGSSLRE DDFEIVNTINSIRTSLRYPMDKQYNWSAGISAKWMDLVVQQGSFIDLYRSEFPGIDRQFVGGVHLGFHYDSRDCGDAIAL SPGKKLRFSGGGEPLGNTTALQGTMLDVEGSYYPEFFGNEKAFGKIRGEVRTYIPLVSSRYSRVALRAGGEKIWGDYPFY EAAFVGGTHLLRGYDKQRFAGDASLYAGSELRLYFGTFKFLVPVMYGPLAFIETGRVFLKGEDSGAWHTSVGGGLWLGFI ESRYTASISFAKGLDDGQLMDDYGIYIGTGFTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101404; Mature: 101404
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCFLKGVSFFAISLITTAGSLSAIAKPTKIPAEQLEGKQVVIVIPGQEYEAGALHTLIF CCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCEEEEEECCCCCCCCCEEEEEE GTHWRSLWTTPVEIMILDLKSFAGGVVPFEKGGGFQTKTLSFRGADGKEYRFRSLDKDPA EHHHHHHHCCCEEEEEEEEHHHCCCCCEECCCCCEEEEEEEEECCCCCCCHHHCCCCCCC RGIPSKLQNTVVSAVVEDQVSSSNPVSALVVSPLLEAAGTYQVTPELTVLPYDKGVLGEY CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCHHHH YDEFAGLAGTIEERPAESDTAGAGFKGADKISGTYAVFNNLEKDNDNQVDQSAYLRARLI HHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH DLFIGDWDRHSDQWKWAGYKKEGKTRWVPIPRDRDHAFSRQDGVFSWIITRVMPRMTGFK HHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC STYPSVKHLTLSARHLDRRLLSGIDRAEWDAITGDVQEKLTDSVISEAVRKMPPAMYEKE CCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC GAQLEHDLRTRRDLLKAASHELYLLYAEDVDIYASNKPEYAGVRRMPDGQVEVAVSKRDA CCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEECCCC VTGAEKGNPFYFRRFNPLETEEVRIYLQGGDDRVVVQGPVCKDGVKVRVIGGEGQDFFED CCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCHHHHC QSEKALSGYPHTAEKMTFFYDDGKKSEFTDGAYTSVDQHTAAEPADDEEKYDLRDRDSGR CHHHHHCCCCCCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ETGMHPLVGYSPDSGVFLGLGVTVADYGFRSAPYRYKIDVSGGVAYGKNDFRNKLQFKGD CCCCCCCEEECCCCCEEEEECEEEECCCCCCCCEEEEEEECCCEEECCHHHHHHEEECCH FRTVLRNASLLVEAGSSGLDLINFYGLGNERYYHGSSLREDDFEIVNTINSIRTSLRYPM HHHHHCCCEEEEECCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCC DKQYNWSAGISAKWMDLVVQQGSFIDLYRSEFPGIDRQFVGGVHLGFHYDSRDCGDAIAL CCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHCCCCCHHHHCEEEEEEEECCCCCCCEEEE SPGKKLRFSGGGEPLGNTTALQGTMLDVEGSYYPEFFGNEKAFGKIRGEVRTYIPLVSSR CCCCEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCH YSRVALRAGGEKIWGDYPFYEAAFVGGTHLLRGYDKQRFAGDASLYAGSELRLYFGTFKF HHEEEEECCCCCCCCCCCCHHEECCCCHHHHHCCCHHHHCCCCCEECCCEEEEEHHHHHH LVPVMYGPLAFIETGRVFLKGEDSGAWHTSVGGGLWLGFIESRYTASISFAKGLDDGQLM HHHHHHCCEEEEECCEEEEEECCCCCEEECCCCCEEEEEHHCCCEEEEEHHCCCCCCCEE DDYGIYIGTGFTF CCCCEEEECCCCC >Mature Secondary Structure MNCFLKGVSFFAISLITTAGSLSAIAKPTKIPAEQLEGKQVVIVIPGQEYEAGALHTLIF CCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCEEEEEECCCCCCCCCEEEEEE GTHWRSLWTTPVEIMILDLKSFAGGVVPFEKGGGFQTKTLSFRGADGKEYRFRSLDKDPA EHHHHHHHCCCEEEEEEEEHHHCCCCCEECCCCCEEEEEEEEECCCCCCCHHHCCCCCCC RGIPSKLQNTVVSAVVEDQVSSSNPVSALVVSPLLEAAGTYQVTPELTVLPYDKGVLGEY CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCHHHH YDEFAGLAGTIEERPAESDTAGAGFKGADKISGTYAVFNNLEKDNDNQVDQSAYLRARLI HHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH DLFIGDWDRHSDQWKWAGYKKEGKTRWVPIPRDRDHAFSRQDGVFSWIITRVMPRMTGFK HHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC STYPSVKHLTLSARHLDRRLLSGIDRAEWDAITGDVQEKLTDSVISEAVRKMPPAMYEKE CCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC GAQLEHDLRTRRDLLKAASHELYLLYAEDVDIYASNKPEYAGVRRMPDGQVEVAVSKRDA CCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEECCCC VTGAEKGNPFYFRRFNPLETEEVRIYLQGGDDRVVVQGPVCKDGVKVRVIGGEGQDFFED CCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCHHHHC QSEKALSGYPHTAEKMTFFYDDGKKSEFTDGAYTSVDQHTAAEPADDEEKYDLRDRDSGR CHHHHHCCCCCCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ETGMHPLVGYSPDSGVFLGLGVTVADYGFRSAPYRYKIDVSGGVAYGKNDFRNKLQFKGD CCCCCCCEEECCCCCEEEEECEEEECCCCCCCCEEEEEEECCCEEECCHHHHHHEEECCH FRTVLRNASLLVEAGSSGLDLINFYGLGNERYYHGSSLREDDFEIVNTINSIRTSLRYPM HHHHHCCCEEEEECCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCC DKQYNWSAGISAKWMDLVVQQGSFIDLYRSEFPGIDRQFVGGVHLGFHYDSRDCGDAIAL CCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHCCCCCHHHHCEEEEEEEECCCCCCCEEEE SPGKKLRFSGGGEPLGNTTALQGTMLDVEGSYYPEFFGNEKAFGKIRGEVRTYIPLVSSR CCCCEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCH YSRVALRAGGEKIWGDYPFYEAAFVGGTHLLRGYDKQRFAGDASLYAGSELRLYFGTFKF HHEEEEECCCCCCCCCCCCHHEECCCCHHHHHCCCHHHHCCCCCEECCCEEEEEHHHHHH LVPVMYGPLAFIETGRVFLKGEDSGAWHTSVGGGLWLGFIESRYTASISFAKGLDDGQLM HHHHHHCCEEEEECCEEEEEECCCCCEEECCCCCEEEEEHHCCCEEEEEHHCCCCCCCEE DDYGIYIGTGFTF CCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA