Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356952
Identifier: 119356952
GI number: 119356952
Start: 1283753
End: 1284727
Strand: Direct
Name: 119356952
Synonym: Cpha266_1132
Alternate gene names: NA
Gene position: 1283753-1284727 (Clockwise)
Preceding gene: 119356951
Following gene: 119356953
Centisome position: 40.96
GC content: 48.62
Gene sequence:
>975_bases ATGGCTTTTCAAAGAAAACATTCATTTTTCTCTTTTTTGCAAGGCAAGGCATCCGGCTCAACGTTGGAAGAGATTGCTGC TGCAGAAAATTACATTCTGGACGAACGTCTTCCTGATGCTCGTGAGAATGAGTTTTTTGACTTTAACGGCTTTCCCCTCG TAGCGTACAATAACGATTCATGGTTTAAGCAACACACCGATTACACAAAGAACTACGTTGCTCTTCCTGTAGTCAGCGGA ACATTTACTTCAATTAATAAAGATAACTGGATCCGAGGAATTGATCCAGACTGGGATGTGGTTCGATTAGAGACCATCTC CGGAATGAGTAGCCGTGCAAGAGGTTCGGATGTCGATGAGTCTGAAGCCGCTGAGCTTATTGAAGAAATGCTGTTAGCTC GAAAGTCTGGAGATATCTTTGAACCATTCAGGGCAGCTCGTCTGGAGAAGTGGATTCAGCGTGTCAATGGTGGGGGCGAC AGACGTCCCGCATTTGTTGCGCCATACGCAGAGGTTGAGAGCATTCTGGCGCAACCCGACTGGGCCAATCGTTTCCGTGA CGCGCTTGGCCTTGGCCACATCAGCCCGTGGGGCGGGAATCCTGTGACGGTAGTGCTTATGCAATACAACCTTGTTCGTG TTCATAATACCCACATAGGCAAGCCTGCATGGGCTGCAACACCTACGGTGCTTGATGATGTGTCTGGACAGATGCCAAAT CCCTGTTTCTTTCCTGCGCCCAAAAAAGCATCACCGGACGGCTATGGTTACACGGTTGACCTTGCCATAACGGATGCTAC ATACCGCAGGGAATTTCTCCACGGGCACATCTGTTACGAGCTTGCAGACATTCGCAACATTGGCAGTGTCACTGAGGATG TGTTACCTGCACGAATTGCCGAAGCACGCAATAGTCATTGCGATTTGCTTACGGCTGATCTGGTTCACTTTAAAGACCTT CCAGCTCGATCATGA
Upstream 100 bases:
>100_bases ACACCGGTAACTCTCGTTTTGGCGGTTGTTATGAGGGTGCAAAGCTATCTGATCCCTGTATGTTCACAGAAGAGGGGGCA AGGTCTATCAGGTGGTCTCT
Downstream 100 bases:
>100_bases ACGAATCAGTCAAAAAGTGGCTTGATGAGCTGGAGGATTCCCCGGCAATGGCAATTCAGAAGCTTATACTCGGATATGCA GGAGTGGTGGCTTGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAFQRKHSFFSFLQGKASGSTLEEIAAAENYILDERLPDARENEFFDFNGFPLVAYNNDSWFKQHTDYTKNYVALPVVSG TFTSINKDNWIRGIDPDWDVVRLETISGMSSRARGSDVDESEAAELIEEMLLARKSGDIFEPFRAARLEKWIQRVNGGGD RRPAFVAPYAEVESILAQPDWANRFRDALGLGHISPWGGNPVTVVLMQYNLVRVHNTHIGKPAWAATPTVLDDVSGQMPN PCFFPAPKKASPDGYGYTVDLAITDATYRREFLHGHICYELADIRNIGSVTEDVLPARIAEARNSHCDLLTADLVHFKDL PARS
Sequences:
>Translated_324_residues MAFQRKHSFFSFLQGKASGSTLEEIAAAENYILDERLPDARENEFFDFNGFPLVAYNNDSWFKQHTDYTKNYVALPVVSG TFTSINKDNWIRGIDPDWDVVRLETISGMSSRARGSDVDESEAAELIEEMLLARKSGDIFEPFRAARLEKWIQRVNGGGD RRPAFVAPYAEVESILAQPDWANRFRDALGLGHISPWGGNPVTVVLMQYNLVRVHNTHIGKPAWAATPTVLDDVSGQMPN PCFFPAPKKASPDGYGYTVDLAITDATYRREFLHGHICYELADIRNIGSVTEDVLPARIAEARNSHCDLLTADLVHFKDL PARS >Mature_323_residues AFQRKHSFFSFLQGKASGSTLEEIAAAENYILDERLPDARENEFFDFNGFPLVAYNNDSWFKQHTDYTKNYVALPVVSGT FTSINKDNWIRGIDPDWDVVRLETISGMSSRARGSDVDESEAAELIEEMLLARKSGDIFEPFRAARLEKWIQRVNGGGDR RPAFVAPYAEVESILAQPDWANRFRDALGLGHISPWGGNPVTVVLMQYNLVRVHNTHIGKPAWAATPTVLDDVSGQMPNP CFFPAPKKASPDGYGYTVDLAITDATYRREFLHGHICYELADIRNIGSVTEDVLPARIAEARNSHCDLLTADLVHFKDLP ARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36312; Mature: 36181
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFQRKHSFFSFLQGKASGSTLEEIAAAENYILDERLPDARENEFFDFNGFPLVAYNNDS CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCC WFKQHTDYTKNYVALPVVSGTFTSINKDNWIRGIDPDWDVVRLETISGMSSRARGSDVDE HHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCH SEAAELIEEMLLARKSGDIFEPFRAARLEKWIQRVNGGGDRRPAFVAPYAEVESILAQPD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCC WANRFRDALGLGHISPWGGNPVTVVLMQYNLVRVHNTHIGKPAWAATPTVLDDVSGQMPN HHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCC PCFFPAPKKASPDGYGYTVDLAITDATYRREFLHGHICYELADIRNIGSVTEDVLPARIA CCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARNSHCDLLTADLVHFKDLPARS HHCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure AFQRKHSFFSFLQGKASGSTLEEIAAAENYILDERLPDARENEFFDFNGFPLVAYNNDS CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCC WFKQHTDYTKNYVALPVVSGTFTSINKDNWIRGIDPDWDVVRLETISGMSSRARGSDVDE HHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCH SEAAELIEEMLLARKSGDIFEPFRAARLEKWIQRVNGGGDRRPAFVAPYAEVESILAQPD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCC WANRFRDALGLGHISPWGGNPVTVVLMQYNLVRVHNTHIGKPAWAATPTVLDDVSGQMPN HHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCC PCFFPAPKKASPDGYGYTVDLAITDATYRREFLHGHICYELADIRNIGSVTEDVLPARIA CCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARNSHCDLLTADLVHFKDLPARS HHCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA