Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356861
Identifier: 119356861
GI number: 119356861
Start: 1171522
End: 1172190
Strand: Direct
Name: 119356861
Synonym: Cpha266_1034
Alternate gene names: NA
Gene position: 1171522-1172190 (Clockwise)
Preceding gene: 119356860
Following gene: 119356862
Centisome position: 37.38
GC content: 50.67
Gene sequence:
>669_bases ATGTCCTGTATAACGGTCGGAAGGGTACTGGGCGGCAACGATCATGCTGCTGCTGTCGAAGTTATTGAACAGGTGTTTGC CAGAGAAAAAAAATGGATCACATCCGCCAGCGGACAAATTCCGGATCATGTGAATGAATCCGGGAATGTCTCATGGTTTC TTGCGCGGGTAAACGGACGTCCTGCTGGGGTGCTGAGGCTTTTGTACGATCCTCCGCTTGAGCTGCCCGATGCGTACGCC GTGAACTTTATGCCGGGAATTGATATCGAGCATCTTAAAAAACAGGGACGATATGTCGAAATAGGGCGATTCATGATTCT TGGCGAGTTTCGCAGAAATTACAGGGTTGCACTTCGGCTCATGCGTGAGGCGACGGCAGAGGTGATGGAGCGGGATTATT CCCATTTCATAACGGATGTTTTTGAGGATGATCAACACTCTCCGCTCAACTTTCACACAAGGGTACTCGGGTTCGAGGCG GTTGGGCGGCATCTTTTCGGGGATCTCAACTGCAGCTCGGCGAGAATCATCCTTACCCTTGATATTCTCAAACTCTACAG TCGCGTCAAAGATAGTCGGAGCAGGATTTACCTCGAACTCATTCATGGAATCCGCGAGATAGCCGAACGCCGAATTCGCC GCATACAGTCAGGCGTTGCAAAAGGGTAG
Upstream 100 bases:
>100_bases TCATGCTTCGCCTCGCAGAGCTTTCGGGAAAACGTTGTTTATCAGATGCGTCTTTCGGAAAAACGGATGGTAACGATAAC TCAAAACAAAAGGAGCAGCT
Downstream 100 bases:
>100_bases AAGATGCATGGAGGGTTGCAGAGATAACGCTAAAAAGCAAGGGAGGAGAGTGCGATGTTGAGACTCGATGAACTCAGGGC TGGTGTCAAAGGGGAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSCITVGRVLGGNDHAAAVEVIEQVFAREKKWITSASGQIPDHVNESGNVSWFLARVNGRPAGVLRLLYDPPLELPDAYA VNFMPGIDIEHLKKQGRYVEIGRFMILGEFRRNYRVALRLMREATAEVMERDYSHFITDVFEDDQHSPLNFHTRVLGFEA VGRHLFGDLNCSSARIILTLDILKLYSRVKDSRSRIYLELIHGIREIAERRIRRIQSGVAKG
Sequences:
>Translated_222_residues MSCITVGRVLGGNDHAAAVEVIEQVFAREKKWITSASGQIPDHVNESGNVSWFLARVNGRPAGVLRLLYDPPLELPDAYA VNFMPGIDIEHLKKQGRYVEIGRFMILGEFRRNYRVALRLMREATAEVMERDYSHFITDVFEDDQHSPLNFHTRVLGFEA VGRHLFGDLNCSSARIILTLDILKLYSRVKDSRSRIYLELIHGIREIAERRIRRIQSGVAKG >Mature_221_residues SCITVGRVLGGNDHAAAVEVIEQVFAREKKWITSASGQIPDHVNESGNVSWFLARVNGRPAGVLRLLYDPPLELPDAYAV NFMPGIDIEHLKKQGRYVEIGRFMILGEFRRNYRVALRLMREATAEVMERDYSHFITDVFEDDQHSPLNFHTRVLGFEAV GRHLFGDLNCSSARIILTLDILKLYSRVKDSRSRIYLELIHGIREIAERRIRRIQSGVAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25334; Mature: 25202
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCITVGRVLGGNDHAAAVEVIEQVFAREKKWITSASGQIPDHVNESGNVSWFLARVNGR CCCEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCC PAGVLRLLYDPPLELPDAYAVNFMPGIDIEHLKKQGRYVEIGRFMILGEFRRNYRVALRL CHHEEHEEECCCCCCCCCEEEECCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHH MREATAEVMERDYSHFITDVFEDDQHSPLNFHTRVLGFEAVGRHLFGDLNCSSARIILTL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH DILKLYSRVKDSRSRIYLELIHGIREIAERRIRRIQSGVAKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SCITVGRVLGGNDHAAAVEVIEQVFAREKKWITSASGQIPDHVNESGNVSWFLARVNGR CCEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCC PAGVLRLLYDPPLELPDAYAVNFMPGIDIEHLKKQGRYVEIGRFMILGEFRRNYRVALRL CHHEEHEEECCCCCCCCCEEEECCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHH MREATAEVMERDYSHFITDVFEDDQHSPLNFHTRVLGFEAVGRHLFGDLNCSSARIILTL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH DILKLYSRVKDSRSRIYLELIHGIREIAERRIRRIQSGVAKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA