Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is eriC [C]
Identifier: 118581673
GI number: 118581673
Start: 3606446
End: 3607891
Strand: Direct
Name: eriC [C]
Synonym: Ppro_3273
Alternate gene names: 118581673
Gene position: 3606446-3607891 (Clockwise)
Preceding gene: 118581660
Following gene: 118581677
Centisome position: 89.98
GC content: 64.45
Gene sequence:
>1446_bases GTGCGGCCAAACATATCCGAACAGTTCACCCTCCTCGCCAGCGTCGTCAAGTGGACCTGCTATGCCTCGATCGTCGGCAT CCTGTCAGGATGCGGCACAACCCTGTTTCTCTGGGCACTGGCCCAGGCGACCCGGCTGTTTGCCCTGATCCCCGACTACT ATCTGCTGCTCCCCGTTACCCTGGTCGTCTGCAGCCTGTTCGTCACCCGCTTTTCGCCGGCCAGCGTCTGTCGGGGAACC GACGCTATCATCGAGGCGGTCCACCAGAACATGGGGAGGATGCCGCTTCTCTCCCTGCCGATCAAGCTGATCGCCACGGT GGTCACCATCGCCGGCGGCGGGTCGGCAGGGAAGGAGTGCCCCAGCGCCCAGATCGGCGCCGGCCTGGCCTCGGCCTTCG GCCGCCTCATGAGGCTGGATGACGTTGACCAGCGCAAGCTGGTCATCTGCGGTATCAGTGCCGGTTTCGCCACCGTATTC GGCACCCCCATCGCCGGCGCCCTCTTCGGCGTGGAGGTGCTGGTGCTGGGCCAGATGATGTACGATGTGCTCTTTCCCTC CTTTGTCGCCGGGATCATCGGTTTTCACGTGGCTTCCCAGCTGGGGGTTGAGTACCCCCACCTGGTGGCCAGCGCCATCC CCCGGCTCACCGGCTGGAGTTTCGCGGAGATGCTTCTGCTGGGAGTCTGGTGCGGCCTGATCGCCCTGCTGTTCATCGAA ATGATGAAGTTGAGCAAGCGCCTGTTCAACCCGTGCGCCGGGAACGCGATCCCCAAGGCGCTCCTGGGGGGGACGTTATT GGCTCTGATCGGCAAGTTCCTCTCCACCAGCTACCTGGGGCTGGGGATCGACACCATCGAGGCGGGGCTTAAGGGGACGG TGCTTCCGGTGGAAGCCTGGCTGGTGAAGAGCGTTGCCACCGCCATCACCCTCGGCAGCGGCGGCAGCGGCGGGGTGGTC ACGCCGATCATGTTCATCGGCGCCTCGGCCGGCAACCTGTTCGCCTCGCTGTTCAACGAGCCGCAGATCGCGACCTTCTC TATCATCGGCATGGCCGCGGTTCTGGCGGGGGCGGCAAACACTCCCATCGCCGCATCGGTGATGGCCATGGAGCTGTTCG GCGCCGGAATCGCGCCCAATGCCGCCGTGGCCTGCATGGTCAGTTTCCTGATCGTCGGCTACCGCAGCATCTACTCCAGC CAGGTCCTGGGTATCCAGAAGAGTACGTCACTCAAGGTGGAGACGGGGAAACCGCTGTCGCAGTTCCGGAGAGCCCGGGT CAACCACCGGGAGAAGTCCCTCGTGGGGCTGATCGAGCGGGGGACGCACCGGTTGCGGGATATCTCACGCCATGAGCGGC GCACCCCGCACAAAGAGGGGCGCACATCGATTGAGAGCGAAGGGACCGGCAAAGACACCGGTGTGAAGCAGGACAGCGGG GAATAA
Upstream 100 bases:
>100_bases AACAAACGGCGGCCGACAACAAAGCCCTGCCTATCTCCACCCTCCAGCGCGAACAACCGGCCCTTTCCCCGCCGGTTGTT CGCGTTCCCAAGGATCTCCC
Downstream 100 bases:
>100_bases GGCGGTGGACGAAAGAGGGGGGCAGGAGTAGCAAGTTCAGGTTTCAGGCGTGAAAGCATCTGTTTCCGGGGATTCAGCTC ATACGTCGGGGACGACCGAG
Product: Cl- channel, voltage-gated family protein
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MRPNISEQFTLLASVVKWTCYASIVGILSGCGTTLFLWALAQATRLFALIPDYYLLLPVTLVVCSLFVTRFSPASVCRGT DAIIEAVHQNMGRMPLLSLPIKLIATVVTIAGGGSAGKECPSAQIGAGLASAFGRLMRLDDVDQRKLVICGISAGFATVF GTPIAGALFGVEVLVLGQMMYDVLFPSFVAGIIGFHVASQLGVEYPHLVASAIPRLTGWSFAEMLLLGVWCGLIALLFIE MMKLSKRLFNPCAGNAIPKALLGGTLLALIGKFLSTSYLGLGIDTIEAGLKGTVLPVEAWLVKSVATAITLGSGGSGGVV TPIMFIGASAGNLFASLFNEPQIATFSIIGMAAVLAGAANTPIAASVMAMELFGAGIAPNAAVACMVSFLIVGYRSIYSS QVLGIQKSTSLKVETGKPLSQFRRARVNHREKSLVGLIERGTHRLRDISRHERRTPHKEGRTSIESEGTGKDTGVKQDSG E
Sequences:
>Translated_481_residues MRPNISEQFTLLASVVKWTCYASIVGILSGCGTTLFLWALAQATRLFALIPDYYLLLPVTLVVCSLFVTRFSPASVCRGT DAIIEAVHQNMGRMPLLSLPIKLIATVVTIAGGGSAGKECPSAQIGAGLASAFGRLMRLDDVDQRKLVICGISAGFATVF GTPIAGALFGVEVLVLGQMMYDVLFPSFVAGIIGFHVASQLGVEYPHLVASAIPRLTGWSFAEMLLLGVWCGLIALLFIE MMKLSKRLFNPCAGNAIPKALLGGTLLALIGKFLSTSYLGLGIDTIEAGLKGTVLPVEAWLVKSVATAITLGSGGSGGVV TPIMFIGASAGNLFASLFNEPQIATFSIIGMAAVLAGAANTPIAASVMAMELFGAGIAPNAAVACMVSFLIVGYRSIYSS QVLGIQKSTSLKVETGKPLSQFRRARVNHREKSLVGLIERGTHRLRDISRHERRTPHKEGRTSIESEGTGKDTGVKQDSG E >Mature_481_residues MRPNISEQFTLLASVVKWTCYASIVGILSGCGTTLFLWALAQATRLFALIPDYYLLLPVTLVVCSLFVTRFSPASVCRGT DAIIEAVHQNMGRMPLLSLPIKLIATVVTIAGGGSAGKECPSAQIGAGLASAFGRLMRLDDVDQRKLVICGISAGFATVF GTPIAGALFGVEVLVLGQMMYDVLFPSFVAGIIGFHVASQLGVEYPHLVASAIPRLTGWSFAEMLLLGVWCGLIALLFIE MMKLSKRLFNPCAGNAIPKALLGGTLLALIGKFLSTSYLGLGIDTIEAGLKGTVLPVEAWLVKSVATAITLGSGGSGGVV TPIMFIGASAGNLFASLFNEPQIATFSIIGMAAVLAGAANTPIAASVMAMELFGAGIAPNAAVACMVSFLIVGYRSIYSS QVLGIQKSTSLKVETGKPLSQFRRARVNHREKSLVGLIERGTHRLRDISRHERRTPHKEGRTSIESEGTGKDTGVKQDSG E
Specific function: Selective chloride channel [C]
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]
Homologues:
Organism=Escherichia coli, GI1786350, Length=383, Percent_Identity=27.154046997389, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 50668; Mature: 50668
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPNISEQFTLLASVVKWTCYASIVGILSGCGTTLFLWALAQATRLFALIPDYYLLLPVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVCSLFVTRFSPASVCRGTDAIIEAVHQNMGRMPLLSLPIKLIATVVTIAGGGSAGKEC HHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC PSAQIGAGLASAFGRLMRLDDVDQRKLVICGISAGFATVFGTPIAGALFGVEVLVLGQMM CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHH YDVLFPSFVAGIIGFHVASQLGVEYPHLVASAIPRLTGWSFAEMLLLGVWCGLIALLFIE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MMKLSKRLFNPCAGNAIPKALLGGTLLALIGKFLSTSYLGLGIDTIEAGLKGTVLPVEAW HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHH LVKSVATAITLGSGGSGGVVTPIMFIGASAGNLFASLFNEPQIATFSIIGMAAVLAGAAN HHHHHHHHHEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC TPIAASVMAMELFGAGIAPNAAVACMVSFLIVGYRSIYSSQVLGIQKSTSLKVETGKPLS CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEEECCCCHH QFRRARVNHREKSLVGLIERGTHRLRDISRHERRTPHKEGRTSIESEGTGKDTGVKQDSG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCC E C >Mature Secondary Structure MRPNISEQFTLLASVVKWTCYASIVGILSGCGTTLFLWALAQATRLFALIPDYYLLLPVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVCSLFVTRFSPASVCRGTDAIIEAVHQNMGRMPLLSLPIKLIATVVTIAGGGSAGKEC HHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC PSAQIGAGLASAFGRLMRLDDVDQRKLVICGISAGFATVFGTPIAGALFGVEVLVLGQMM CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHH YDVLFPSFVAGIIGFHVASQLGVEYPHLVASAIPRLTGWSFAEMLLLGVWCGLIALLFIE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MMKLSKRLFNPCAGNAIPKALLGGTLLALIGKFLSTSYLGLGIDTIEAGLKGTVLPVEAW HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHH LVKSVATAITLGSGGSGGVVTPIMFIGASAGNLFASLFNEPQIATFSIIGMAAVLAGAAN HHHHHHHHHEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC TPIAASVMAMELFGAGIAPNAAVACMVSFLIVGYRSIYSSQVLGIQKSTSLKVETGKPLS CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEEECCCCHH QFRRARVNHREKSLVGLIERGTHRLRDISRHERRTPHKEGRTSIESEGTGKDTGVKQDSG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]