Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578979
Identifier: 118578979
GI number: 118578979
Start: 577719
End: 578429
Strand: Direct
Name: 118578979
Synonym: Ppro_0540
Alternate gene names: NA
Gene position: 577719-578429 (Clockwise)
Preceding gene: 118578978
Following gene: 118578980
Centisome position: 14.41
GC content: 54.15
Gene sequence:
>711_bases ATGTCTGAGTCTCTGAGAATCGCACTGATTGCCGAAGGCCCAACGGATAAGATCGTTATTGAGGCCGCGTTGAAGGCCAT TCTGCAACAGCCATTTGTATTGATTCCGCTGCAACCTGAACCAACACGCCCTGACCTTGGCGGCGGCTGGTGCGGTGTGT TGAAATGGTGTCGGGAGTTCCGCGCCCGCGGGTATGGTTCTTTCGAGGAAGACCCCACTCTGGAACTGTACGATTTTTTC ATCCTCCACTTGGATGCTGATGTCGCCCACAAGTCCTACTCAGATGTCGGTCCTGCCATTGAACAGGAAGCGCAACAGTC TGCTTGGGGGGCATTGCCCTGTTTTCAACCATGTCCGCCGCCTGGCGCAACCGTCAACGGTCTGAAGTCTGTGCTGTTCT CCTGGCTTGGTGTCGCCTCGGTCGGCAGTCGAACCGTCCTCTGTATTCCCTCCAAATCAACGGAAACCTGGCTTGCCGTT GCGGTCTATCCGGACAACGAAAATCTGCTGAACGGGCTGGAATGCACACTGATCATGGAAGGCCGGCTGGCAAGTTTATC CAAAGGACAACGTATCAGAAAGTCGGCAAGGGAATACACGAACCATGCAGCGACTATCACCGGTGCCTGGGATAGTGTTC GTGCACAATGCTCCCAAGCAGATGTTTTCCATAATAACAGCACAACCATTCTCATGGGAGAGGCGGCATGA
Upstream 100 bases:
>100_bases CAAATTACCAGAATTCAGTTGAGTGAAAAACTCCTGGCGCTGAATAAAGATTATCCCCTGTCACGGCTCTGGCTGATGGG AAATCTGGGGGCTGTTCCCA
Downstream 100 bases:
>100_bases CAAGTAGCACCCTGATTCAGAAAGTCTGGGGCGGGGCGCGGGGTCAGGGCAATCGCATGAAATTCAGGCCAGTTTGGAGA AGACCGTCATGGCCTCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSESLRIALIAEGPTDKIVIEAALKAILQQPFVLIPLQPEPTRPDLGGGWCGVLKWCREFRARGYGSFEEDPTLELYDFF ILHLDADVAHKSYSDVGPAIEQEAQQSAWGALPCFQPCPPPGATVNGLKSVLFSWLGVASVGSRTVLCIPSKSTETWLAV AVYPDNENLLNGLECTLIMEGRLASLSKGQRIRKSAREYTNHAATITGAWDSVRAQCSQADVFHNNSTTILMGEAA
Sequences:
>Translated_236_residues MSESLRIALIAEGPTDKIVIEAALKAILQQPFVLIPLQPEPTRPDLGGGWCGVLKWCREFRARGYGSFEEDPTLELYDFF ILHLDADVAHKSYSDVGPAIEQEAQQSAWGALPCFQPCPPPGATVNGLKSVLFSWLGVASVGSRTVLCIPSKSTETWLAV AVYPDNENLLNGLECTLIMEGRLASLSKGQRIRKSAREYTNHAATITGAWDSVRAQCSQADVFHNNSTTILMGEAA >Mature_235_residues SESLRIALIAEGPTDKIVIEAALKAILQQPFVLIPLQPEPTRPDLGGGWCGVLKWCREFRARGYGSFEEDPTLELYDFFI LHLDADVAHKSYSDVGPAIEQEAQQSAWGALPCFQPCPPPGATVNGLKSVLFSWLGVASVGSRTVLCIPSKSTETWLAVA VYPDNENLLNGLECTLIMEGRLASLSKGQRIRKSAREYTNHAATITGAWDSVRAQCSQADVFHNNSTTILMGEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25663; Mature: 25532
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESLRIALIAEGPTDKIVIEAALKAILQQPFVLIPLQPEPTRPDLGGGWCGVLKWCREF CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH RARGYGSFEEDPTLELYDFFILHLDADVAHKSYSDVGPAIEQEAQQSAWGALPCFQPCPP HHCCCCCCCCCCCHHEEEEEEEEECHHHHHCCHHHCCHHHHHHHHHHHCCCCCCCCCCCC PGATVNGLKSVLFSWLGVASVGSRTVLCIPSKSTETWLAVAVYPDNENLLNGLECTLIME CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCCHHCCCEEEEEEC GRLASLSKGQRIRKSAREYTNHAATITGAWDSVRAQCSQADVFHNNSTTILMGEAA CCCHHHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHEEECCCCEEEEECCC >Mature Secondary Structure SESLRIALIAEGPTDKIVIEAALKAILQQPFVLIPLQPEPTRPDLGGGWCGVLKWCREF CCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH RARGYGSFEEDPTLELYDFFILHLDADVAHKSYSDVGPAIEQEAQQSAWGALPCFQPCPP HHCCCCCCCCCCCHHEEEEEEEEECHHHHHCCHHHCCHHHHHHHHHHHCCCCCCCCCCCC PGATVNGLKSVLFSWLGVASVGSRTVLCIPSKSTETWLAVAVYPDNENLLNGLECTLIME CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCCHHCCCEEEEEEC GRLASLSKGQRIRKSAREYTNHAATITGAWDSVRAQCSQADVFHNNSTTILMGEAA CCCHHHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA