Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
---|---|
Accession | NC_008609 |
Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118578705
Identifier: 118578705
GI number: 118578705
Start: 259490
End: 260773
Strand: Direct
Name: 118578705
Synonym: Ppro_0262
Alternate gene names: NA
Gene position: 259490-260773 (Clockwise)
Preceding gene: 118578684
Following gene: 118578715
Centisome position: 6.47
GC content: 45.56
Gene sequence:
>1284_bases ATGAAGAAAATATTGCTAAAACAGATCATAAGAGATTTCCATCTCTCACCGCTGCCGGCGCTTAAGCGTCGAACATTGCA GGTACCTACCAACACGGGGAAAATAATTACGCTCGTGGGTGTTCGGCGAAGCGGAAAAACTTCCTACCTGTTTAATCTCA TCGAGAACCTCCTGAAACAGTGCGTTCCGATGGATAGAATTCTGTACGTCAACTTTGAGGATGAGCGGCTTAATCTGAAA ACCGAGGAGCTTGATCTTCTGCTGCAGGCTTACCAGGAGCTTTATCCCGATATACAGGTGGAGGGATGTCACTTTTTCTT TGATGAGATCCAGAACATCGATGGTTGGGATAAGTTTGTGCGGCGGGTGTACGACAAGGGAACGAAAAAAATCTACATAA CCGGCTCAAATGCCCGCTTCCTGAGTAGTGAGATTGCCACCAGCCTTCGTGGTAGAACGATCAGCTATGAGGTGTTTCCG CTATCGTTCCGCGAATACCTTTTCTTCAAGGACGTTGTGCCGGATATCAACAGTACGAAGTCTATCGCTCAGATTAACCA TCACTTGGCAGACTACTTGAAGAATGGTGGTTTCCCGGAGGTAATCGGGTATGACGACGCTTTGCGTAATCGGGTTCTAC AGGAATACTTCAATGTCATGATCTATCGTGACTTGCTCGAACGATATGAGATCAAAAATCTGCCGGCACTGAAATTCTTT TTGAAGAGGATCTTGTCATCGGCCACAAAGCAGATCTCGGTCAATAACATCTATAACGAATTGAAGTCATCAGGGTTCAA GATAGGGAAAACCCAGCTATACGACAATCTGGAAGCCTGCGTGAACATCTATATGGCGCAGTTATTGAGGAAGCATACCA ACTCGCTCGTGGATCGGGAGTTGGGTGAGAAGAAGATTTATGCCATAGATAGCGGTCTGTTGAATGCCATTGACTACAAA TTTTCCGATGATACCGGCAAGTCTCTGGAGCAGGCAGTATTTCTGGAACTGAAACGGCGCGAAAAAGATGTCTACTTCTT CAAGGACAAATTCGAATGTGATTTCATCATCAAGCATGGCTCTGACGTGACAGAAGCCATCCAGGTCACAGTAACAATGA GTGATGAAAAGACCAGAAATCGAGAAATCAAGGGTCTTACGGAGTGCTGCAATGAATTCGGATTACAGGAAGGATTGATA ATTACCCTCGATAGCTCGGAAGAATTTGAGCTGAATGGGATCAAGATCCGAGTGGTGCCCCTCTATCGGTGGCTATTAAT CTGA
Upstream 100 bases:
>100_bases TGATCTTCATATTGATTATCTTCAGGGGGGGAAGGTGAGAATACGCGAGGCACAACATTTTCCTTGAATAAAGGAAGATT TCTGCTATTTTTTCCTTGTC
Downstream 100 bases:
>100_bases TTTGACCATCCTACAATCAATAGCAGAGTTGAAAAGCCGCAAACTCCAGTAAAAAGTTTGCGGCTTTTAGTTTCATCCTC GACTGAACCGTGTGGCGAGG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MKKILLKQIIRDFHLSPLPALKRRTLQVPTNTGKIITLVGVRRSGKTSYLFNLIENLLKQCVPMDRILYVNFEDERLNLK TEELDLLLQAYQELYPDIQVEGCHFFFDEIQNIDGWDKFVRRVYDKGTKKIYITGSNARFLSSEIATSLRGRTISYEVFP LSFREYLFFKDVVPDINSTKSIAQINHHLADYLKNGGFPEVIGYDDALRNRVLQEYFNVMIYRDLLERYEIKNLPALKFF LKRILSSATKQISVNNIYNELKSSGFKIGKTQLYDNLEACVNIYMAQLLRKHTNSLVDRELGEKKIYAIDSGLLNAIDYK FSDDTGKSLEQAVFLELKRREKDVYFFKDKFECDFIIKHGSDVTEAIQVTVTMSDEKTRNREIKGLTECCNEFGLQEGLI ITLDSSEEFELNGIKIRVVPLYRWLLI
Sequences:
>Translated_427_residues MKKILLKQIIRDFHLSPLPALKRRTLQVPTNTGKIITLVGVRRSGKTSYLFNLIENLLKQCVPMDRILYVNFEDERLNLK TEELDLLLQAYQELYPDIQVEGCHFFFDEIQNIDGWDKFVRRVYDKGTKKIYITGSNARFLSSEIATSLRGRTISYEVFP LSFREYLFFKDVVPDINSTKSIAQINHHLADYLKNGGFPEVIGYDDALRNRVLQEYFNVMIYRDLLERYEIKNLPALKFF LKRILSSATKQISVNNIYNELKSSGFKIGKTQLYDNLEACVNIYMAQLLRKHTNSLVDRELGEKKIYAIDSGLLNAIDYK FSDDTGKSLEQAVFLELKRREKDVYFFKDKFECDFIIKHGSDVTEAIQVTVTMSDEKTRNREIKGLTECCNEFGLQEGLI ITLDSSEEFELNGIKIRVVPLYRWLLI >Mature_427_residues MKKILLKQIIRDFHLSPLPALKRRTLQVPTNTGKIITLVGVRRSGKTSYLFNLIENLLKQCVPMDRILYVNFEDERLNLK TEELDLLLQAYQELYPDIQVEGCHFFFDEIQNIDGWDKFVRRVYDKGTKKIYITGSNARFLSSEIATSLRGRTISYEVFP LSFREYLFFKDVVPDINSTKSIAQINHHLADYLKNGGFPEVIGYDDALRNRVLQEYFNVMIYRDLLERYEIKNLPALKFF LKRILSSATKQISVNNIYNELKSSGFKIGKTQLYDNLEACVNIYMAQLLRKHTNSLVDRELGEKKIYAIDSGLLNAIDYK FSDDTGKSLEQAVFLELKRREKDVYFFKDKFECDFIIKHGSDVTEAIQVTVTMSDEKTRNREIKGLTECCNEFGLQEGLI ITLDSSEEFELNGIKIRVVPLYRWLLI
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49776; Mature: 49776
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS00226 IF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLKQIIRDFHLSPLPALKRRTLQVPTNTGKIITLVGVRRSGKTSYLFNLIENLLKQ CHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH CVPMDRILYVNFEDERLNLKTEELDLLLQAYQELYPDIQVEGCHFFFDEIQNIDGWDKFV HCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCHHHHH RRVYDKGTKKIYITGSNARFLSSEIATSLRGRTISYEVFPLSFREYLFFKDVVPDINSTK HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHCCCCCCHH SIAQINHHLADYLKNGGFPEVIGYDDALRNRVLQEYFNVMIYRDLLERYEIKNLPALKFF HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LKRILSSATKQISVNNIYNELKSSGFKIGKTQLYDNLEACVNIYMAQLLRKHTNSLVDRE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEKKIYAIDSGLLNAIDYKFSDDTGKSLEQAVFLELKRREKDVYFFKDKFECDFIIKHG CCCCEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECC SDVTEAIQVTVTMSDEKTRNREIKGLTECCNEFGLQEGLIITLDSSEEFELNGIKIRVVP CCCCEEEEEEEEECCCCHHCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCEEEEEEE LYRWLLI HHHHHHC >Mature Secondary Structure MKKILLKQIIRDFHLSPLPALKRRTLQVPTNTGKIITLVGVRRSGKTSYLFNLIENLLKQ CHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH CVPMDRILYVNFEDERLNLKTEELDLLLQAYQELYPDIQVEGCHFFFDEIQNIDGWDKFV HCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCHHHHH RRVYDKGTKKIYITGSNARFLSSEIATSLRGRTISYEVFPLSFREYLFFKDVVPDINSTK HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHCCCCCCHH SIAQINHHLADYLKNGGFPEVIGYDDALRNRVLQEYFNVMIYRDLLERYEIKNLPALKFF HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LKRILSSATKQISVNNIYNELKSSGFKIGKTQLYDNLEACVNIYMAQLLRKHTNSLVDRE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEKKIYAIDSGLLNAIDYKFSDDTGKSLEQAVFLELKRREKDVYFFKDKFECDFIIKHG CCCCEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECC SDVTEAIQVTVTMSDEKTRNREIKGLTECCNEFGLQEGLIITLDSSEEFELNGIKIRVVP CCCCEEEEEEEEECCCCHHCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCEEEEEEE LYRWLLI HHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]