Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
---|---|
Accession | NC_008609 |
Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118578647
Identifier: 118578647
GI number: 118578647
Start: 202941
End: 203915
Strand: Direct
Name: 118578647
Synonym: Ppro_0203
Alternate gene names: NA
Gene position: 202941-203915 (Clockwise)
Preceding gene: 118578646
Following gene: 118578648
Centisome position: 5.06
GC content: 52.62
Gene sequence:
>975_bases ATGAGCAAACTCGCTGCATTTCTGGGACGGGCTATTCCGACCCATCAGCAGAAACAATCTTCACATCTTGGTGACCGTAC CGGATACGTCGGAGCCTCCGATATTGCCGGCTGCCCGCGTAAAGCAGCTCTCGGCAAACAATGCCCGTCCAGTCACGACA TCACGACACTCCTGCGCTTTTCCCGTGGCCATGCTGCGCAAGCCATGTATGCCGAGTTTTTCAGGACTGGTGGCGCTCTC TTCGAGGAAGAGGTCGAAGTACGTCACCCGGATATCCCTGAAATCAGGTGTCACATTGACTTTCTGTTCTATGCAAACCG GCAGACCAAACGGCTGCACATCGTGGAGATGAAATCGACCGACGGCATCCCCGATGAACCTTACGCATCCTGGGTGGATC AACTGCATGTCCAGATGGGCCTGCTGCATCTCACCCTCGATCCTGAAGTGGAAATCGGCGGATCAATTCTGGTGGTTGAC CTCAATGCGGGAACATACCGGGAATTCAATAACTATGCACCAAACAAGCTGGTGTTTAATCAGCTTATGGAAAAAGGTCA GCACATCCTTGCGGCAACACGAGACGAGTGTGCACCTAAAACGGAACCTGGCTTTCTCTGCGGATACTGTTCGTTTCGCC ACGGTTGTCCCTCTCATGCGATTGACATGGAGCTCCCCCCGGAAATCCACCACGCTGGCAGGGCATACCTGGAACTGAAC GAACAGAAAAAAGGGATCGAAGCTCGACTGGAAGTCCTGAAGAACGAAATCCTCACGTTTGCGGATGGAGTATTCAAGGG GGCTTCAGACGGAATCCTGGTCAATGTCACCTCGGTGGCTGACTCGGTGATCGTCGACAGCAAGAAGCTGAAGAACTCGT ATCCGGATATCTATGATCAAGTCACGAAACCGAAATCCGGTTTTCTAAAGCTTGAAATCAAACCATTCATGCCGCTCGCA ACACAGGCGGCCTGA
Upstream 100 bases:
>100_bases GATCAGCATCGATGTCACCAGGATCATTGCCGGCGTTATTTTCGGTTCCCTGCTCACCGCAGTCGGAACTCTGCCGTTTC TGATTTGAAAGGAGACAGCC
Downstream 100 bases:
>100_bases TCCAACCCCACAAGGGGGCGTTACGCTCCCCATGGGAAATCTCCATTCATGGAGGCGTGCGCCCCCATTGAAAGGAGATC CCCGATGAAAATCTATCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSKLAAFLGRAIPTHQQKQSSHLGDRTGYVGASDIAGCPRKAALGKQCPSSHDITTLLRFSRGHAAQAMYAEFFRTGGAL FEEEVEVRHPDIPEIRCHIDFLFYANRQTKRLHIVEMKSTDGIPDEPYASWVDQLHVQMGLLHLTLDPEVEIGGSILVVD LNAGTYREFNNYAPNKLVFNQLMEKGQHILAATRDECAPKTEPGFLCGYCSFRHGCPSHAIDMELPPEIHHAGRAYLELN EQKKGIEARLEVLKNEILTFADGVFKGASDGILVNVTSVADSVIVDSKKLKNSYPDIYDQVTKPKSGFLKLEIKPFMPLA TQAA
Sequences:
>Translated_324_residues MSKLAAFLGRAIPTHQQKQSSHLGDRTGYVGASDIAGCPRKAALGKQCPSSHDITTLLRFSRGHAAQAMYAEFFRTGGAL FEEEVEVRHPDIPEIRCHIDFLFYANRQTKRLHIVEMKSTDGIPDEPYASWVDQLHVQMGLLHLTLDPEVEIGGSILVVD LNAGTYREFNNYAPNKLVFNQLMEKGQHILAATRDECAPKTEPGFLCGYCSFRHGCPSHAIDMELPPEIHHAGRAYLELN EQKKGIEARLEVLKNEILTFADGVFKGASDGILVNVTSVADSVIVDSKKLKNSYPDIYDQVTKPKSGFLKLEIKPFMPLA TQAA >Mature_323_residues SKLAAFLGRAIPTHQQKQSSHLGDRTGYVGASDIAGCPRKAALGKQCPSSHDITTLLRFSRGHAAQAMYAEFFRTGGALF EEEVEVRHPDIPEIRCHIDFLFYANRQTKRLHIVEMKSTDGIPDEPYASWVDQLHVQMGLLHLTLDPEVEIGGSILVVDL NAGTYREFNNYAPNKLVFNQLMEKGQHILAATRDECAPKTEPGFLCGYCSFRHGCPSHAIDMELPPEIHHAGRAYLELNE QKKGIEARLEVLKNEILTFADGVFKGASDGILVNVTSVADSVIVDSKKLKNSYPDIYDQVTKPKSGFLKLEIKPFMPLAT QAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35934; Mature: 35803
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLAAFLGRAIPTHQQKQSSHLGDRTGYVGASDIAGCPRKAALGKQCPSSHDITTLLRF CHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCHHHHHHH SRGHAAQAMYAEFFRTGGALFEEEVEVRHPDIPEIRCHIDFLFYANRQTKRLHIVEMKST HCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCC DGIPDEPYASWVDQLHVQMGLLHLTLDPEVEIGGSILVVDLNAGTYREFNNYAPNKLVFN CCCCCCHHHHHHHHHHHHHCEEEEEECCCEEECCEEEEEECCCCCCHHHCCCCCHHHHHH QLMEKGQHILAATRDECAPKTEPGFLCGYCSFRHGCPSHAIDMELPPEIHHAGRAYLELN HHHHCCCEEEEECHHHCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCHHHHHCCCEEEEEC EQKKGIEARLEVLKNEILTFADGVFKGASDGILVNVTSVADSVIVDSKKLKNSYPDIYDQ CHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCHHHHHCCCCHHHHH VTKPKSGFLKLEIKPFMPLATQAA HCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure SKLAAFLGRAIPTHQQKQSSHLGDRTGYVGASDIAGCPRKAALGKQCPSSHDITTLLRF HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCHHHHHHH SRGHAAQAMYAEFFRTGGALFEEEVEVRHPDIPEIRCHIDFLFYANRQTKRLHIVEMKST HCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCC DGIPDEPYASWVDQLHVQMGLLHLTLDPEVEIGGSILVVDLNAGTYREFNNYAPNKLVFN CCCCCCHHHHHHHHHHHHHCEEEEEECCCEEECCEEEEEECCCCCCHHHCCCCCHHHHHH QLMEKGQHILAATRDECAPKTEPGFLCGYCSFRHGCPSHAIDMELPPEIHHAGRAYLELN HHHHCCCEEEEECHHHCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCHHHHHCCCEEEEEC EQKKGIEARLEVLKNEILTFADGVFKGASDGILVNVTSVADSVIVDSKKLKNSYPDIYDQ CHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCHHHHHCCCCHHHHH VTKPKSGFLKLEIKPFMPLATQAA HCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA