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The map label for this gene is ythB [H]

Identifier: 118480264

GI number: 118480264

Start: 4970321

End: 4971415

Strand: Direct

Name: ythB [H]

Synonym: BALH_4723

Alternate gene names: 118480264

Gene position: 4970321-4971415 (Clockwise)

Preceding gene: 118480263

Following gene: 118480265

Centisome position: 94.55

GC content: 39.54

Gene sequence:

>1095_bases
TTGTGCTACGGACATTCTTTAAGAAACATCCGCTTACAAATGATTTACATCACGAAGGAGGCGATTCTCGTGCATGAGGA
AAGTATTGCAATCATCATCTTATGGGCCCTTATTTTCGTATACAGTATATTAGGATCCATCGATTTTGGGGCAGGTTTTT
GGGGCATGGTATACGCAAAACATCCAACGCTCGCTGCCAAGCTTGCCAACCGATACTTATCACCGACTTGGGAAGTAACA
AATACGTTTCTCGTCTTTGTCGTTGTCGCATTTCTTGGCTTCTTTCCGAAAGCAGCCTTTACTCTTGCGACAGTAATGTT
CGTACCCGTTATGTTAATTTTAGTACTCGTGGCAATTCGCAGTACATTTATGGTATTTGCTTATTCCCTACCGAAGTACC
AACACCTTCTTCGTATCATTTCAGGTATTACAGGGCTCTTAATTCCAGCTCTATTAATTACCGTTTTACCCGTTACAGAA
GGCGCCTATATTACAATGTCTGAAGGAAAAGAAGTACTCCTGTATGGAAAACTTCTTTCTAGTCCTGTTATTTATTGTTA
TATGCTCTTCGGACTAACTTCGGAACTCTTTCTATCTTCTCTCTTTCTTGCTGATTTTGCGAGAGAACAAGGTTCAGAAG
ATGCATATAAAATTTATAGAAGAAATGCAATCATCCTTGGTCCTGCAACGCTCGTTACGGCGATTATCGCCCTCGTTGTA
ATGGATCCAGAAACACACTGGCTTATGCAAGGACTAATAAAACAATTCCCATGGTTTACAGTTTCTATCGTTTTATTCGT
TATCGGGTACTCTTCCCTTTGGTGGACAAACAAGAAGTATAGCACACTAGGATTCCCTCGCATTGCTGTTTTAGCTGTCG
TCGCTCAATATGCATTTGCAAGTTACGCTTACGGCGTTGCGCATTTACCGTATATTATTTACCCTGATGTAACTGTATTT
ACAAGCTTTACAACGGTCGAAACATTCTATGCATTGCTTATTTTATATGCAATTGGGATCGCAATTTTATTACCAGGATT
TATTTTCTTCTGGAACTTATTCTTGAAGGATCGAACTTTTTTGAAGGAAAAATAA

Upstream 100 bases:

>100_bases
ATGCAACGTACAGTCGACGCTTCTACACGCGCTGATTTTGTCGGTCCTTTATTTATTCTATTCATCATTTTATATATTGG
ACTCGGTATTTTAACAGTCT

Downstream 100 bases:

>100_bases
TATTGTGGGGGGCCTGTTCCGAAAGGTATTTCGAGATGGGCTCCCTTTGTCATGTTTTGTCGGTAAATCGATATATTTTA
AAAATCGCTGATATATTTTG

Product: cytochrome d ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MCYGHSLRNIRLQMIYITKEAILVHEESIAIIILWALIFVYSILGSIDFGAGFWGMVYAKHPTLAAKLANRYLSPTWEVT
NTFLVFVVVAFLGFFPKAAFTLATVMFVPVMLILVLVAIRSTFMVFAYSLPKYQHLLRIISGITGLLIPALLITVLPVTE
GAYITMSEGKEVLLYGKLLSSPVIYCYMLFGLTSELFLSSLFLADFAREQGSEDAYKIYRRNAIILGPATLVTAIIALVV
MDPETHWLMQGLIKQFPWFTVSIVLFVIGYSSLWWTNKKYSTLGFPRIAVLAVVAQYAFASYAYGVAHLPYIIYPDVTVF
TSFTTVETFYALLILYAIGIAILLPGFIFFWNLFLKDRTFLKEK

Sequences:

>Translated_364_residues
MCYGHSLRNIRLQMIYITKEAILVHEESIAIIILWALIFVYSILGSIDFGAGFWGMVYAKHPTLAAKLANRYLSPTWEVT
NTFLVFVVVAFLGFFPKAAFTLATVMFVPVMLILVLVAIRSTFMVFAYSLPKYQHLLRIISGITGLLIPALLITVLPVTE
GAYITMSEGKEVLLYGKLLSSPVIYCYMLFGLTSELFLSSLFLADFAREQGSEDAYKIYRRNAIILGPATLVTAIIALVV
MDPETHWLMQGLIKQFPWFTVSIVLFVIGYSSLWWTNKKYSTLGFPRIAVLAVVAQYAFASYAYGVAHLPYIIYPDVTVF
TSFTTVETFYALLILYAIGIAILLPGFIFFWNLFLKDRTFLKEK
>Mature_364_residues
MCYGHSLRNIRLQMIYITKEAILVHEESIAIIILWALIFVYSILGSIDFGAGFWGMVYAKHPTLAAKLANRYLSPTWEVT
NTFLVFVVVAFLGFFPKAAFTLATVMFVPVMLILVLVAIRSTFMVFAYSLPKYQHLLRIISGITGLLIPALLITVLPVTE
GAYITMSEGKEVLLYGKLLSSPVIYCYMLFGLTSELFLSSLFLADFAREQGSEDAYKIYRRNAIILGPATLVTAIIALVV
MDPETHWLMQGLIKQFPWFTVSIVLFVIGYSSLWWTNKKYSTLGFPRIAVLAVVAQYAFASYAYGVAHLPYIIYPDVTVF
TSFTTVETFYALLILYAIGIAILLPGFIFFWNLFLKDRTFLKEK

Specific function: Unknown

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 41104; Mature: 41104

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYGHSLRNIRLQMIYITKEAILVHEESIAIIILWALIFVYSILGSIDFGAGFWGMVYAK
CCCCCCCCCEEEEEEEEEHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEC
HPTLAAKLANRYLSPTWEVTNTFLVFVVVAFLGFFPKAAFTLATVMFVPVMLILVLVAIR
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STFMVFAYSLPKYQHLLRIISGITGLLIPALLITVLPVTEGAYITMSEGKEVLLYGKLLS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHH
SPVIYCYMLFGLTSELFLSSLFLADFAREQGSEDAYKIYRRNAIILGPATLVTAIIALVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECHHHHHHHHHHHHH
MDPETHWLMQGLIKQFPWFTVSIVLFVIGYSSLWWTNKKYSTLGFPRIAVLAVVAQYAFA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHEECCCCCCCCCCHHHHHHHHHHHHHHH
SYAYGVAHLPYIIYPDVTVFTSFTTVETFYALLILYAIGIAILLPGFIFFWNLFLKDRTF
HHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKEK
HCCC
>Mature Secondary Structure
MCYGHSLRNIRLQMIYITKEAILVHEESIAIIILWALIFVYSILGSIDFGAGFWGMVYAK
CCCCCCCCCEEEEEEEEEHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEC
HPTLAAKLANRYLSPTWEVTNTFLVFVVVAFLGFFPKAAFTLATVMFVPVMLILVLVAIR
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STFMVFAYSLPKYQHLLRIISGITGLLIPALLITVLPVTEGAYITMSEGKEVLLYGKLLS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHH
SPVIYCYMLFGLTSELFLSSLFLADFAREQGSEDAYKIYRRNAIILGPATLVTAIIALVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECHHHHHHHHHHHHH
MDPETHWLMQGLIKQFPWFTVSIVLFVIGYSSLWWTNKKYSTLGFPRIAVLAVVAQYAFA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHEECCCCCCCCCCHHHHHHHHHHHHHHH
SYAYGVAHLPYIIYPDVTVFTSFTTVETFYALLILYAIGIAILLPGFIFFWNLFLKDRTF
HHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKEK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]