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The map label for this gene is lytR [H]

Identifier: 118480234

GI number: 118480234

Start: 4934674

End: 4935936

Strand: Direct

Name: lytR [H]

Synonym: BALH_4692

Alternate gene names: 118480234

Gene position: 4934674-4935936 (Clockwise)

Preceding gene: 118480233

Following gene: 118480237

Centisome position: 93.87

GC content: 36.26

Gene sequence:

>1263_bases
ATGTACAATTACAGAAGGAGATATGTTGTACTTAGAACAAGATGTTATCTAAGAATAACTACTTTATCGCCTTTAAAGAT
TAATGTAGTGAATTACTTCCCTACAAATGAACTAAGGAGATTATATATGGAAGAACGTTATTATCATCTCCAAAATAGCA
GAATAAAAAAGAAACGAAGAAGAAAGTTTTTCTACTTCCTTATTTTCTTATTTTTATTTGGTAGTGTAGGACTTTATATA
TTAAATTCCTACTCTTCTCTCATGGGGATGTATAGTGGTTTTACTCGTGAAAAGTCGGATTTGAGAACCGAAGATGTAGA
AATTACAAAGGAGCCTTTTACACTCCTTATCATGGGGATAGAAGATTATGCAACAGACGGTCAAAACGGTCGTACAGATT
CAATAATGTTTGCGACAGTCAATCCGAAAACGCAAAAAATTTCGCTTATGAGTATCCCTCGTGATAGTCGCGTTCCAATT
GTCGGAAAGAATAAAGAGGACAAAATTAACGCTGCGCATGCTTACGGCGGAGAAGAAATGGCAATCAAAACTGTCGAAGG
TTTTCTAAAAGTGCCTGTAGACCATTATCTTAAAATTGATTTCCAAGGTTTTAAAGGTATTGTTGATGCTGTTGGCGGTG
TTACTGTTGATGTCCCCTTCGATTTTTGGGAGCGTTCAGACGTGGATTACTACAAAAAAATCGAATTTAAGCAAGGGCAA
CAAGAATTAAATGGTGAAGAAGCACTCGCTTACGTTCGTATGCGAAAGCAAGATCCGAATGGCGACTATGGTCGGGCCGC
TAGACAAAGACAATTACTAGCTGCTGTTGCTCAAAAACTAAATTCTACCTCTACCGTATTTAAAATTAAAGATTTGACAG
CAGTCGTTGGAAAATATATAAAAACTGACATTCCTATTTCAGATGGCCTTGCTCTTTACAATAAACTCTCTGGATTTGAT
CCTTCTACAATACAAACGTTCAAACTGGAAGGAGAAGATAAAAAAATAGGTGGTATTTATTACTTCCTTCCAGATCCAAA
CGGTGTTGAGGCAGTACGTAACGAAATTAAAAAAGAATTAGGAGAAAAGGTAAACACGCAAGAAAATACAACAACAACAA
CAAAAAAAACCGAATCAAATCCTTCTTCAAATTCTAACTCTAACGAAAAAGCGAAGAAAGAAACGAATCAGGACAAAACA
CCAACTGATCCCCCTCCTTCTACGAATGCTCATGCAGAGTGGATTATGAGAAATCAGCAATAA

Upstream 100 bases:

>100_bases
AAGATATACATTACCTCGAAAATGTCACATTTGATACGTATGTAGAAGAAGATGGAAAACAAACATTCACGGATTGGATG
ATTGAATTAACAAATGGGAA

Downstream 100 bases:

>100_bases
AAAAAGGCCAAATCGCATGCGATTTGGCTTTTTTTCACTTATTAAAGTGTTTTAAAATTGCTTCTACAATACGCTCTGAT
GCACGGCCATCACCGTACGG

Product: LytR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MYNYRRRYVVLRTRCYLRITTLSPLKINVVNYFPTNELRRLYMEERYYHLQNSRIKKKRRRKFFYFLIFLFLFGSVGLYI
LNSYSSLMGMYSGFTREKSDLRTEDVEITKEPFTLLIMGIEDYATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPI
VGKNKEDKINAAHAYGGEEMAIKTVEGFLKVPVDHYLKIDFQGFKGIVDAVGGVTVDVPFDFWERSDVDYYKKIEFKQGQ
QELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNSTSTVFKIKDLTAVVGKYIKTDIPISDGLALYNKLSGFD
PSTIQTFKLEGEDKKIGGIYYFLPDPNGVEAVRNEIKKELGEKVNTQENTTTTTKKTESNPSSNSNSNEKAKKETNQDKT
PTDPPPSTNAHAEWIMRNQQ

Sequences:

>Translated_420_residues
MYNYRRRYVVLRTRCYLRITTLSPLKINVVNYFPTNELRRLYMEERYYHLQNSRIKKKRRRKFFYFLIFLFLFGSVGLYI
LNSYSSLMGMYSGFTREKSDLRTEDVEITKEPFTLLIMGIEDYATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPI
VGKNKEDKINAAHAYGGEEMAIKTVEGFLKVPVDHYLKIDFQGFKGIVDAVGGVTVDVPFDFWERSDVDYYKKIEFKQGQ
QELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNSTSTVFKIKDLTAVVGKYIKTDIPISDGLALYNKLSGFD
PSTIQTFKLEGEDKKIGGIYYFLPDPNGVEAVRNEIKKELGEKVNTQENTTTTTKKTESNPSSNSNSNEKAKKETNQDKT
PTDPPPSTNAHAEWIMRNQQ
>Mature_420_residues
MYNYRRRYVVLRTRCYLRITTLSPLKINVVNYFPTNELRRLYMEERYYHLQNSRIKKKRRRKFFYFLIFLFLFGSVGLYI
LNSYSSLMGMYSGFTREKSDLRTEDVEITKEPFTLLIMGIEDYATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPI
VGKNKEDKINAAHAYGGEEMAIKTVEGFLKVPVDHYLKIDFQGFKGIVDAVGGVTVDVPFDFWERSDVDYYKKIEFKQGQ
QELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNSTSTVFKIKDLTAVVGKYIKTDIPISDGLALYNKLSGFD
PSTIQTFKLEGEDKKIGGIYYFLPDPNGVEAVRNEIKKELGEKVNTQENTTTTTKKTESNPSSNSNSNEKAKKETNQDKT
PTDPPPSTNAHAEWIMRNQQ

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 48225; Mature: 48225

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNYRRRYVVLRTRCYLRITTLSPLKINVVNYFPTNELRRLYMEERYYHLQNSRIKKKRR
CCCCCEEEEEEEEEEEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKFFYFLIFLFLFGSVGLYILNSYSSLMGMYSGFTREKSDLRTEDVEITKEPFTLLIMGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEECCCEEEEEEEC
EDYATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPIVGKNKEDKINAAHAYGGEEM
HHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEECCCCCCCCCHHHCCCCCCE
AIKTVEGFLKVPVDHYLKIDFQGFKGIVDAVGGVTVDVPFDFWERSDVDYYKKIEFKQGQ
EHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCH
QELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNSTSTVFKIKDLTAVVGKYI
HHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH
KTDIPISDGLALYNKLSGFDPSTIQTFKLEGEDKKIGGIYYFLPDPNGVEAVRNEIKKEL
HCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEECEEEEECCCCCCHHHHHHHHHHHH
GEKVNTQENTTTTTKKTESNPSSNSNSNEKAKKETNQDKTPTDPPPSTNAHAEWIMRNQQ
HHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHEEECCC
>Mature Secondary Structure
MYNYRRRYVVLRTRCYLRITTLSPLKINVVNYFPTNELRRLYMEERYYHLQNSRIKKKRR
CCCCCEEEEEEEEEEEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKFFYFLIFLFLFGSVGLYILNSYSSLMGMYSGFTREKSDLRTEDVEITKEPFTLLIMGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEECCCEEEEEEEC
EDYATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPIVGKNKEDKINAAHAYGGEEM
HHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEECCCCCCCCCHHHCCCCCCE
AIKTVEGFLKVPVDHYLKIDFQGFKGIVDAVGGVTVDVPFDFWERSDVDYYKKIEFKQGQ
EHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCH
QELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNSTSTVFKIKDLTAVVGKYI
HHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH
KTDIPISDGLALYNKLSGFDPSTIQTFKLEGEDKKIGGIYYFLPDPNGVEAVRNEIKKEL
HCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEECEEEEECCCCCCHHHHHHHHHHHH
GEKVNTQENTTTTTKKTESNPSSNSNSNEKAKKETNQDKTPTDPPPSTNAHAEWIMRNQQ
HHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]