Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is ynbD [C]
Identifier: 118480081
GI number: 118480081
Start: 4764593
End: 4765240
Strand: Direct
Name: ynbD [C]
Synonym: BALH_4529
Alternate gene names: 118480081
Gene position: 4764593-4765240 (Clockwise)
Preceding gene: 118480078
Following gene: 118480099
Centisome position: 90.63
GC content: 34.88
Gene sequence:
>648_bases ATGAAGAAATTTAAACTTTCATCTTTTCTTCCGTTAAGTTATATACTTCTACTCGTACTCGTAAGTCCCCTTTACGATGT ATTAAATAAATCGGCTGTTCACGCAGTAGATGTCACAACTGTAGTAGATGATTGGATTCCATTTGTGAAAGCATTTATTA TTCCTTATTTAATTTGGTTTCCTTACTTATACGGTGCACTTATTTATTACTGCTTTGCAGATCGAAAACAATATTATGTC ACTTTAAGTAGTATCATTCTTGGAAAACTTGCTTGTTTTTCCATTTATTATTTTTGGCAGACAACTGTACCACGTCCAAC CGTCGTTGGAACAGACGTATTTTCCGAACTAGTCCGCTATATTTATAGTATCGATCAACCGGTAAATTGTTTCCCTAGCA TTCATGTTCTTACTACATTTGTCATTATGCTAGCTGCCTTTAAACGTAGAGAACAACATGCTTTTGAATATTACATTCTT ACCTTCTTCGGTACGCTTATTATTTTATCAACGCTATTTACGAAGCAACATGCATTTGTAGACGCCGTTTCTGGAATGAC GCTTGCAAGCATACTTTACTTCGGCGTTCAGCTGTTATTAGCAAAAGAAACGGTACGTGTTCCAGTAAAACAAAATCATA AAATGTAA
Upstream 100 bases:
>100_bases GGTGAATTCAAGAAAATGTAAGCAAAATCGATAGCCCAAATTACGTTTCTATATTATAATCAATTGAATTTACTTACATT ACTAAACATAGGAGATTATT
Downstream 100 bases:
>100_bases AAAGCAGACTGTGGCTTCCAGTCTGCTTTTCTCTATATAAAAGGAGATTTTCAATTTAAGATTGCGGTACAGTCATATCA CCAGAGTGAATACGACCTGC
Product: PAP2 family protein
Products: NA
Alternate protein names: Phosphatase; Ser/Thr And Tyr Protein Phosphatase; Phosphoesterase PA-Phosphatase ; Phosphatidic Acid Phosphatase; Ser/Thr And Tyr Protein Phosphatase
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKKFKLSSFLPLSYILLLVLVSPLYDVLNKSAVHAVDVTTVVDDWIPFVKAFIIPYLIWFPYLYGALIYYCFADRKQYYV TLSSIILGKLACFSIYYFWQTTVPRPTVVGTDVFSELVRYIYSIDQPVNCFPSIHVLTTFVIMLAAFKRREQHAFEYYIL TFFGTLIILSTLFTKQHAFVDAVSGMTLASILYFGVQLLLAKETVRVPVKQNHKM
Sequences:
>Translated_215_residues MKKFKLSSFLPLSYILLLVLVSPLYDVLNKSAVHAVDVTTVVDDWIPFVKAFIIPYLIWFPYLYGALIYYCFADRKQYYV TLSSIILGKLACFSIYYFWQTTVPRPTVVGTDVFSELVRYIYSIDQPVNCFPSIHVLTTFVIMLAAFKRREQHAFEYYIL TFFGTLIILSTLFTKQHAFVDAVSGMTLASILYFGVQLLLAKETVRVPVKQNHKM >Mature_215_residues MKKFKLSSFLPLSYILLLVLVSPLYDVLNKSAVHAVDVTTVVDDWIPFVKAFIIPYLIWFPYLYGALIYYCFADRKQYYV TLSSIILGKLACFSIYYFWQTTVPRPTVVGTDVFSELVRYIYSIDQPVNCFPSIHVLTTFVIMLAAFKRREQHAFEYYIL TFFGTLIILSTLFTKQHAFVDAVSGMTLASILYFGVQLLLAKETVRVPVKQNHKM
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24840; Mature: 24840
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFKLSSFLPLSYILLLVLVSPLYDVLNKSAVHAVDVTTVVDDWIPFVKAFIIPYLIWF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PYLYGALIYYCFADRKQYYVTLSSIILGKLACFSIYYFWQTTVPRPTVVGTDVFSELVRY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH IYSIDQPVNCFPSIHVLTTFVIMLAAFKRREQHAFEYYILTFFGTLIILSTLFTKQHAFV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAVSGMTLASILYFGVQLLLAKETVRVPVKQNHKM HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC >Mature Secondary Structure MKKFKLSSFLPLSYILLLVLVSPLYDVLNKSAVHAVDVTTVVDDWIPFVKAFIIPYLIWF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PYLYGALIYYCFADRKQYYVTLSSIILGKLACFSIYYFWQTTVPRPTVVGTDVFSELVRY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH IYSIDQPVNCFPSIHVLTTFVIMLAAFKRREQHAFEYYILTFFGTLIILSTLFTKQHAFV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAVSGMTLASILYFGVQLLLAKETVRVPVKQNHKM HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA