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The map label for this gene is ybbM [H]

Identifier: 118480030

GI number: 118480030

Start: 4721436

End: 4722296

Strand: Direct

Name: ybbM [H]

Synonym: BALH_4477

Alternate gene names: 118480030

Gene position: 4721436-4722296 (Clockwise)

Preceding gene: 118480029

Following gene: 118480036

Centisome position: 89.81

GC content: 39.49

Gene sequence:

>861_bases
TTGCGGACGATATTATTGAGATTAGTAAAGCAAACGGTGCAACTAGAAAGGAAGTGCTCTCAGTTGAAGGGCGTTATTGA
ACTCCAAATTTGGCAACTTGCCGCTGCATATATTTTCATTCTTATTTTAATTGGGCTTGTGAAGTTAAAAGGAATACCTC
GCGAAAAACAAATCGCGCTCGCAACATTCCGTATGACGATTCAGCTCGTACTTGTTGCCTATGTCCTTACATACGTATTT
GAAAACAGTAATCCATTTTATACAATTGCTCTCATTGCTTCTATTACTACCTTTGCAATTTTTAATATTTATAAACGAGT
TAACATCCCTATGTCCAAAGAATTAAAACGAGTAGCCGCCCTTTCTATGGTATCCGGATCCATTGGGCCACTTCTACTAT
TTATCTTTGTTATTATCGGACATGATCCTTGGTATGCGCCGCAATATATCGTTCCGATTACCGGAATGTTAGTTGGAAAT
GCGATGACCGGTGTTTCTCTCGGTGCAAATACGTTCTTAAACAATATGAAATCGCAAAGAGGTCAAATTGAAGGAGCACT
TATGCTCGGTGCAACGCCAAAAGAAGCCACTGCTCCACTCATACGCGACGCTTTTGACTCTGCCATTTTACCAACGATCA
ATTCTATGGTCGGAATGGGAATTATAAGCTTACCAGGCATGATGACAGGACAAATCTTATCTGGTGTATCACCATTCACA
GCCATTCAATATCAAATCGCAATTATACTTGGTATTTCAGGAAGTACCGCTTTTGCGGTTATTATCTTTTTACAGCTTGG
CTATAAAACATTCTTTAATAAGCGTTGTCAGTTGAAAGAAGTAGACTATGGCGGGCGTTAA

Upstream 100 bases:

>100_bases
GATACAGAACGACGCGTTATGAAGCAGTTCACTACGCTAGCAAGAGAAAAGAAAAAAACAGTTATCTTCATCACACACTC
ACAACAACTTCCAGAAGAAA

Downstream 100 bases:

>100_bases
ATTGTGCACTGTTTATGGTAAATGAAATTATATCGACGATTTTTCGAATATATCTATCATAACTCAAAATATATCAACGA
TTTTTGAAATATATCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRTILLRLVKQTVQLERKCSQLKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVF
ENSNPFYTIALIASITTFAIFNIYKRVNIPMSKELKRVAALSMVSGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGN
AMTGVSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFT
AIQYQIAIILGISGSTAFAVIIFLQLGYKTFFNKRCQLKEVDYGGR

Sequences:

>Translated_286_residues
MRTILLRLVKQTVQLERKCSQLKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVF
ENSNPFYTIALIASITTFAIFNIYKRVNIPMSKELKRVAALSMVSGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGN
AMTGVSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFT
AIQYQIAIILGISGSTAFAVIIFLQLGYKTFFNKRCQLKEVDYGGR
>Mature_286_residues
MRTILLRLVKQTVQLERKCSQLKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVF
ENSNPFYTIALIASITTFAIFNIYKRVNIPMSKELKRVAALSMVSGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGN
AMTGVSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFT
AIQYQIAIILGISGSTAFAVIIFLQLGYKTFFNKRCQLKEVDYGGR

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=246, Percent_Identity=34.5528455284553, Blast_Score=147, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 31418; Mature: 31418

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTILLRLVKQTVQLERKCSQLKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIAL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ATFRMTIQLVLVAYVLTYVFENSNPFYTIALIASITTFAIFNIYKRVNIPMSKELKRVAA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LSMVSGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQR
HHHHCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHC
GQIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFT
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHH
AIQYQIAIILGISGSTAFAVIIFLQLGYKTFFNKRCQLKEVDYGGR
HHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MRTILLRLVKQTVQLERKCSQLKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIAL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ATFRMTIQLVLVAYVLTYVFENSNPFYTIALIASITTFAIFNIYKRVNIPMSKELKRVAA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LSMVSGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQR
HHHHCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHC
GQIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFT
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHH
AIQYQIAIILGISGSTAFAVIIFLQLGYKTFFNKRCQLKEVDYGGR
HHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]