Click here to switch to the map view.

The map label for this gene is glgB [H]

Identifier: 118479986

GI number: 118479986

Start: 4657137

End: 4659119

Strand: Reverse

Name: glgB [H]

Synonym: BALH_4432

Alternate gene names: 118479986

Gene position: 4659119-4657137 (Counterclockwise)

Preceding gene: 118479989

Following gene: 118479985

Centisome position: 88.63

GC content: 37.32

Gene sequence:

>1983_bases
TTGGTAAAGTATAAAAAATTCTGTCATCTTAGTGAGGTGAGCATATTGAGTGTAATAAATTGTGAAGAAGTGAAACGAGA
TGAGTTTCATACCGAAAAGTACTATGAAAGTTATAACATCTTTGGCGCACATATTGTGACGGAAGATGAGATGCGAGGTG
TACGATTTACAGTATGGGCTCCTCATGCGAAAGCAATGAGTGTTGTTGGAGATTTTAATGAATGGGATTATGAGCAACAT
AAGATGCTGCAAGTGACAGAAGAGGGAATTTGGTCCCTATTTATACCGCATATAGAAGAAAGAGAAATATATAAATATGC
GATTGAAACGATGGCTGGTGATGTCATTTTTAAGGCAGATCCGTATGCTGTGTATGCAGAAGTAAGACCGAATACGGCAT
CTGTAGTTTTTGATATAAAGGGATACGAATGGAATGATAAAAACTGGAGCCGTAAGAAAAAGAAAAAATCGGTTTATAAA
GAAGCGATGACAGTTTATGAATTACATTTCGGTTCTTGGAAAAAGAAAGAAGATGGAACACTGTATTCTTACAGAGAAAT
GGCAGAAGAACTCATTCCTTATGTGGTGGAACATCAATTTACACATATTGAAATTATGCCGCTTGTTGAGCATCCATATG
ATCGTTCTTGGGGATATCAAGGGACGGGATATTATGCAGCAACGAGTAGATTCGGCACGCCATATGATTTGATGCATTTT
GTCGATGAATGTCATAAATATGGAATCGGTGTCATTTTAGATTGGGTGCCGGGGCATTTTTGTAAAGATGCTCACGGTTT
ATATTTGTTTGATGGGACACCGACTTATGAATATAAAGATAAAGATGTGCAAGAAAATCCAGTATGGGGAACTGTCAACT
TTGATTTAGGAAAGAGGGAAGTACGTAATTTCTTAATTTCAAATGCGTTATTTTGGATGAGATATTTCCATATTGATGGT
TTCAGGGTGGATGCAGTTGCGAACATGCTGTACTGGAATAAAGAAGGACAAGAGCAAAGTAATGAGCACGCTGTGTCATT
TTTACGAGAGTTAAATGAAGCGGTGTTTGCAGAGGATGAAGATTTTCTTATGACAGCAGAGGATTCAACAGCTTGGCCAC
TTGTAACAGCTCCAACATATGAAGGTGGGCTTGGATTCAATTACAAATGGAATATGGGCTGGATGAATGACGTGCTGAAA
TATATGGAATGTGCGCCAGAGTACAGAAAATATATTCATGATAAAATGACGTTCTCTTTACTATATACTTACTCTGAAAA
TTTCATATTACCGCTTTCTCATGATGAAGTCGTTCATGGGAAAAAGTCGTTATTAAATAAAATGCCAGGAGACTACTGGG
ATAAGTTTGCTCAACTTCGTTTATTATATGGATATTTCTTTACTCACCCAGGAAAGAAATTACTTTTCATGGGAGGAGAA
TTCGGACAGTTTGATGAGTGGAAAGACCTTGAAGATTTAGATTGGAATTTACATGATTTTGAAATGCATCGTTATATGCA
TGATTACTTTAAAGAGCTCATAGCATTGTATAAGCGCTCTAAACCACTTTGGCAGCTTGATCATTCGCGTGAAGGATTTC
AGTGGATTGATGCTAATAATAATGAGCAAAGTATTTTCTCGTTTATCCGCCAAGGGGATAAACAAGAAGATGCGTTAGTT
GTCATATGTAATTTTACGAAAGCTACATACGACAACTATAAAGTAGGTGTACCAGATTTCGAGTATTATAACGAGATTTT
AAACAGTGATGCTGAGCAATATGGCGGATCAGGGCAAGTAAATAAGAAACGTCTTAAGACGATTCAAGAACCGTATCATA
ATCAAACAGCACATGTAGAAATTACAATTCCACCATTTGGCGTATCCATATTACGACCAGTGAAGACGAGAAAGGGGAGC
AAAAAACAAGATGGCTCAAAAACAAAAGTGCGTAGCAATGTTACTAGCAGGGGGAAAAGGTAG

Upstream 100 bases:

>100_bases
TTCGATATTTTATATAGAAATGTGAAAAAAATTAAACATTTTTAAGAAAAAAACGTATATTTTTTATAAATTAACAAGGA
TATTTCAGTTTTTCGCAGAA

Downstream 100 bases:

>100_bases
TCGATTAAGTGCATTAACAAAAAATTTAGCCAAGCCAGCTGTTCCATTTGGTGGTAAATATCGCATTATTGATTTTACGC
TAAGTAACTGCGCGAATTCT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MVKYKKFCHLSEVSILSVINCEEVKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWAPHAKAMSVVGDFNEWDYEQH
KMLQVTEEGIWSLFIPHIEEREIYKYAIETMAGDVIFKADPYAVYAEVRPNTASVVFDIKGYEWNDKNWSRKKKKKSVYK
EAMTVYELHFGSWKKKEDGTLYSYREMAEELIPYVVEHQFTHIEIMPLVEHPYDRSWGYQGTGYYAATSRFGTPYDLMHF
VDECHKYGIGVILDWVPGHFCKDAHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKREVRNFLISNALFWMRYFHIDG
FRVDAVANMLYWNKEGQEQSNEHAVSFLRELNEAVFAEDEDFLMTAEDSTAWPLVTAPTYEGGLGFNYKWNMGWMNDVLK
YMECAPEYRKYIHDKMTFSLLYTYSENFILPLSHDEVVHGKKSLLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGE
FGQFDEWKDLEDLDWNLHDFEMHRYMHDYFKELIALYKRSKPLWQLDHSREGFQWIDANNNEQSIFSFIRQGDKQEDALV
VICNFTKATYDNYKVGVPDFEYYNEILNSDAEQYGGSGQVNKKRLKTIQEPYHNQTAHVEITIPPFGVSILRPVKTRKGS
KKQDGSKTKVRSNVTSRGKR

Sequences:

>Translated_660_residues
MVKYKKFCHLSEVSILSVINCEEVKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWAPHAKAMSVVGDFNEWDYEQH
KMLQVTEEGIWSLFIPHIEEREIYKYAIETMAGDVIFKADPYAVYAEVRPNTASVVFDIKGYEWNDKNWSRKKKKKSVYK
EAMTVYELHFGSWKKKEDGTLYSYREMAEELIPYVVEHQFTHIEIMPLVEHPYDRSWGYQGTGYYAATSRFGTPYDLMHF
VDECHKYGIGVILDWVPGHFCKDAHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKREVRNFLISNALFWMRYFHIDG
FRVDAVANMLYWNKEGQEQSNEHAVSFLRELNEAVFAEDEDFLMTAEDSTAWPLVTAPTYEGGLGFNYKWNMGWMNDVLK
YMECAPEYRKYIHDKMTFSLLYTYSENFILPLSHDEVVHGKKSLLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGE
FGQFDEWKDLEDLDWNLHDFEMHRYMHDYFKELIALYKRSKPLWQLDHSREGFQWIDANNNEQSIFSFIRQGDKQEDALV
VICNFTKATYDNYKVGVPDFEYYNEILNSDAEQYGGSGQVNKKRLKTIQEPYHNQTAHVEITIPPFGVSILRPVKTRKGS
KKQDGSKTKVRSNVTSRGKR
>Mature_660_residues
MVKYKKFCHLSEVSILSVINCEEVKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWAPHAKAMSVVGDFNEWDYEQH
KMLQVTEEGIWSLFIPHIEEREIYKYAIETMAGDVIFKADPYAVYAEVRPNTASVVFDIKGYEWNDKNWSRKKKKKSVYK
EAMTVYELHFGSWKKKEDGTLYSYREMAEELIPYVVEHQFTHIEIMPLVEHPYDRSWGYQGTGYYAATSRFGTPYDLMHF
VDECHKYGIGVILDWVPGHFCKDAHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKREVRNFLISNALFWMRYFHIDG
FRVDAVANMLYWNKEGQEQSNEHAVSFLRELNEAVFAEDEDFLMTAEDSTAWPLVTAPTYEGGLGFNYKWNMGWMNDVLK
YMECAPEYRKYIHDKMTFSLLYTYSENFILPLSHDEVVHGKKSLLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGE
FGQFDEWKDLEDLDWNLHDFEMHRYMHDYFKELIALYKRSKPLWQLDHSREGFQWIDANNNEQSIFSFIRQGDKQEDALV
VICNFTKATYDNYKVGVPDFEYYNEILNSDAEQYGGSGQVNKKRLKTIQEPYHNQTAHVEITIPPFGVSILRPVKTRKGS
KKQDGSKTKVRSNVTSRGKR

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=646, Percent_Identity=26.625386996904, Blast_Score=182, Evalue=7e-46,
Organism=Escherichia coli, GI1789839, Length=608, Percent_Identity=43.0921052631579, Blast_Score=510, Evalue=1e-145,
Organism=Caenorhabditis elegans, GI17554896, Length=645, Percent_Identity=25.7364341085271, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI32564391, Length=604, Percent_Identity=25.1655629139073, Blast_Score=160, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320826, Length=661, Percent_Identity=26.7776096822995, Blast_Score=187, Evalue=6e-48,
Organism=Drosophila melanogaster, GI28573410, Length=679, Percent_Identity=26.9513991163476, Blast_Score=199, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 77912; Mature: 77912

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKYKKFCHLSEVSILSVINCEEVKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWA
CCCHHHHHCCCCCHHHEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCEEEEEEC
PHAKAMSVVGDFNEWDYEQHKMLQVTEEGIWSLFIPHIEEREIYKYAIETMAGDVIFKAD
CCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCEEEECC
PYAVYAEVRPNTASVVFDIKGYEWNDKNWSRKKKKKSVYKEAMTVYELHFGSWKKKEDGT
CEEEEEEECCCCEEEEEEEECEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC
LYSYREMAEELIPYVVEHQFTHIEIMPLVEHPYDRSWGYQGTGYYAATSRFGTPYDLMHF
CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHH
VDECHKYGIGVILDWVPGHFCKDAHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKRE
HHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHH
VRNFLISNALFWMRYFHIDGFRVDAVANMLYWNKEGQEQSNEHAVSFLRELNEAVFAEDE
HHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
DFLMTAEDSTAWPLVTAPTYEGGLGFNYKWNMGWMNDVLKYMECAPEYRKYIHDKMTFSL
CEEEEECCCCCCCEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHEEEE
LYTYSENFILPLSHDEVVHGKKSLLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGE
EEEECCCEEEECCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
FGQFDEWKDLEDLDWNLHDFEMHRYMHDYFKELIALYKRSKPLWQLDHSREGFQWIDANN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC
NEQSIFSFIRQGDKQEDALVVICNFTKATYDNYKVGVPDFEYYNEILNSDAEQYGGSGQV
CHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCHHHCCCCCCC
NKKRLKTIQEPYHNQTAHVEITIPPFGVSILRPVKTRKGSKKQDGSKTKVRSNVTSRGKR
CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MVKYKKFCHLSEVSILSVINCEEVKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWA
CCCHHHHHCCCCCHHHEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCEEEEEEC
PHAKAMSVVGDFNEWDYEQHKMLQVTEEGIWSLFIPHIEEREIYKYAIETMAGDVIFKAD
CCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCEEEECC
PYAVYAEVRPNTASVVFDIKGYEWNDKNWSRKKKKKSVYKEAMTVYELHFGSWKKKEDGT
CEEEEEEECCCCEEEEEEEECEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC
LYSYREMAEELIPYVVEHQFTHIEIMPLVEHPYDRSWGYQGTGYYAATSRFGTPYDLMHF
CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHH
VDECHKYGIGVILDWVPGHFCKDAHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKRE
HHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHH
VRNFLISNALFWMRYFHIDGFRVDAVANMLYWNKEGQEQSNEHAVSFLRELNEAVFAEDE
HHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
DFLMTAEDSTAWPLVTAPTYEGGLGFNYKWNMGWMNDVLKYMECAPEYRKYIHDKMTFSL
CEEEEECCCCCCCEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHEEEE
LYTYSENFILPLSHDEVVHGKKSLLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGE
EEEECCCEEEECCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
FGQFDEWKDLEDLDWNLHDFEMHRYMHDYFKELIALYKRSKPLWQLDHSREGFQWIDANN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC
NEQSIFSFIRQGDKQEDALVVICNFTKATYDNYKVGVPDFEYYNEILNSDAEQYGGSGQV
CHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCHHHCCCCCCC
NKKRLKTIQEPYHNQTAHVEITIPPFGVSILRPVKTRKGSKKQDGSKTKVRSNVTSRGKR
CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA