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The map label for this gene is gerPF [H]

Identifier: 118479921

GI number: 118479921

Start: 4585505

End: 4585738

Strand: Reverse

Name: gerPF [H]

Synonym: BALH_4365

Alternate gene names: 118479921

Gene position: 4585738-4585505 (Counterclockwise)

Preceding gene: 118479922

Following gene: 118479918

Centisome position: 87.23

GC content: 36.75

Gene sequence:

>234_bases
ATGAAAGTGGGTGACAAAATGCCGTCAGTTGTGGAAGGTGTTATTATTGAAAACTGTAACGGAACGATTAATTTAGGAGA
TAAATATAATGTGCAGCCGATTGAAAAAACGAAAGCTTATAATGGATCGGGATCATCGAATACAGGGATTAAAGTACAAA
CATTTAGCGGGATTAGTACAGCAGATGTAGGGGATAGTGATGCGAATGACCAAGGAATACAATTTACTTTATAG

Upstream 100 bases:

>100_bases
GAAAAAAGGTAAATAAGAAAAAAGCACTCAGTTGGAGTGCTTTTTTCTTATGGAAACATGCTATTTTGTTAGGCGCTTTT
CATAGAATGAAAGTAAGGAA

Downstream 100 bases:

>100_bases
AGAAATATGCAAAGTTGCATAAAATGATGAACTTGCCCTGTGCTACAATCTAACTGTGAGCTGTTAATGATTCTTCTGTA
TTATAGTTGTTAGATTAGAA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MKVGDKMPSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL

Sequences:

>Translated_77_residues
MKVGDKMPSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL
>Mature_77_residues
MKVGDKMPSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 8069; Mature: 8069

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGDKMPSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGIST
CCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
ADVGDSDANDQGIQFTL
CCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MKVGDKMPSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGIST
CCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
ADVGDSDANDQGIQFTL
CCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]