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The map label for this gene is racX [H]

Identifier: 118479884

GI number: 118479884

Start: 4546519

End: 4547193

Strand: Direct

Name: racX [H]

Synonym: BALH_4328

Alternate gene names: 118479884

Gene position: 4546519-4547193 (Clockwise)

Preceding gene: 118479883

Following gene: 118479885

Centisome position: 86.48

GC content: 37.04

Gene sequence:

>675_bases
ATGATTGGAATACTAGCAGGAATGGGGCCAAAATCAACTGGACCATTCGTTGATACAGTTGTAGCAAAGTGCCAAACAAT
ATATGGAGCAAAACATGATATAGACTTTCCCCATATGATGATTTACTCGTGTCCAACACCGTTTTACATGGATCACCCTA
TTGATCATGAAGCGATGAAAAAAGCGATTATTGAAGGGGCACAAAAACTTGAAAGTACTGGCGCAAGCTTTATCGCTATG
CCTTGCAATACGGCGCATCTTTATTTTAAAGAATTACAGCAATCTATTTCTATTCCAATTTTAAATATAGTCGATGAAAC
GTTACAAGTAATTCCTGAAAATACAAAAAGAGTCGCTCTTCTCGCAACAGAAGCAACTGTTCAAGCTGGAATTTACCAAG
ATGGGATTGCAAAGCGTAATATAGAGTACATTCATCATGAAAAATGGCAAGAAAGCATTAATCAAATTATTTCTTGTATT
AAAGGCGGAGAAATTGAAAAAGCTCGCGAATTATGGAATGCGCTCGTTTTACAATTGAAAGATGAAGTTGATACTGCAAT
TATCGCATGTACTGATTTGAATGTGGTGGCGAGTGAGAATTTTGTTGATTCTTCCCAATGTCTTGCGAAAGCGGTTGTTA
GGATGTATGTAGAAAATATAAGGAGGTCCCAATGA

Upstream 100 bases:

>100_bases
CACAGCTTGGGCTATCGTATATTCATTTTTATTATTTACCTTATTTCTTTTTATCGTTCGCAAAAAACGTTTTTAATTAC
ATATTAAAGGAGACGAAACA

Downstream 100 bases:

>100_bases
ATATACCTTTTGAAATGGGATACACGTTTGATGAAAACCTTAGAGAAAAACCTTTATCCCTTGTTGAAATGAAGCAAGGG
ATTGTACTTTTGAAAGAGCA

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MIGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDIDFPHMMIYSCPTPFYMDHPIDHEAMKKAIIEGAQKLESTGASFIAM
PCNTAHLYFKELQQSISIPILNIVDETLQVIPENTKRVALLATEATVQAGIYQDGIAKRNIEYIHHEKWQESINQIISCI
KGGEIEKARELWNALVLQLKDEVDTAIIACTDLNVVASENFVDSSQCLAKAVVRMYVENIRRSQ

Sequences:

>Translated_224_residues
MIGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDIDFPHMMIYSCPTPFYMDHPIDHEAMKKAIIEGAQKLESTGASFIAM
PCNTAHLYFKELQQSISIPILNIVDETLQVIPENTKRVALLATEATVQAGIYQDGIAKRNIEYIHHEKWQESINQIISCI
KGGEIEKARELWNALVLQLKDEVDTAIIACTDLNVVASENFVDSSQCLAKAVVRMYVENIRRSQ
>Mature_224_residues
MIGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDIDFPHMMIYSCPTPFYMDHPIDHEAMKKAIIEGAQKLESTGASFIAM
PCNTAHLYFKELQQSISIPILNIVDETLQVIPENTKRVALLATEATVQAGIYQDGIAKRNIEYIHHEKWQESINQIISCI
KGGEIEKARELWNALVLQLKDEVDTAIIACTDLNVVASENFVDSSQCLAKAVVRMYVENIRRSQ

Specific function: Probable aspartate or glutamate racemase involved in peptidoglycan modification during cortex synthesis [H]

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 24938; Mature: 24938

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDIDFPHMMIYSCPTPFYMDHPIDHEAMK
CEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH
KAIIEGAQKLESTGASFIAMPCNTAHLYFKELQQSISIPILNIVDETLQVIPENTKRVAL
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE
LATEATVQAGIYQDGIAKRNIEYIHHEKWQESINQIISCIKGGEIEKARELWNALVLQLK
EEEHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DEVDTAIIACTDLNVVASENFVDSSQCLAKAVVRMYVENIRRSQ
HHHCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDIDFPHMMIYSCPTPFYMDHPIDHEAMK
CEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH
KAIIEGAQKLESTGASFIAMPCNTAHLYFKELQQSISIPILNIVDETLQVIPENTKRVAL
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE
LATEATVQAGIYQDGIAKRNIEYIHHEKWQESINQIISCIKGGEIEKARELWNALVLQLK
EEEHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DEVDTAIIACTDLNVVASENFVDSSQCLAKAVVRMYVENIRRSQ
HHHCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491712; 9384377 [H]