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The map label for this gene is gerHC

Identifier: 118479868

GI number: 118479868

Start: 4528245

End: 4529381

Strand: Direct

Name: gerHC

Synonym: BALH_4309

Alternate gene names: NA

Gene position: 4528245-4529381 (Clockwise)

Preceding gene: 118479867

Following gene: 118479869

Centisome position: 86.14

GC content: 33.77

Gene sequence:

>1137_bases
TTGGCTCATTTATGTATACATCCCAATCCTATTTATCATTGTGTGGGTGAAAAGAAAATGGAAAAAATCAAAAATAAATT
AATAGCTATCTCTTGTATAGCACTCTTCAGTCTAACTGGATGTTTACAAAAAAATATTATCGATGACGTACACCTTATAC
AAGGAACTGTCTTTGATGTAGCAAAAGATAATCAGATAAAGGTAACATTTGTTTGTCCTATTCAGCAAAAAGGGAACAAA
GTTCAAGTTTTTGAAGGAACAGCAAATGCGGTAAAACAAGTAAAAGCAGACACATCTTTAGAGTCTTCTCAACCATTTGC
TAGCGGGCAAATGCGAGTTGCTCTATTTACCACCCGAATTGCTAAGAAGGGCATGGTTGCTTCCTTCGATACATTAATTC
GCGATGTAAACATTGGGAATGCCTTATATGTTGCTTTACTTGAAGGGAATGGTACTGAACTTTTAAAAGGAAAGTACACG
ACTTCATCCAACGTTGCAATTTATATAAAAAAAATGCTAGAACATAATATGGAAACCGGTCCTTTACCAAAAGATAACCT
GCATATAGGAGCATTCCGTTATTATCAAGAAGGGCACGACTACTATATTCCAATTCTAAAGAAACATGGTGATAAAATAA
AAATCACGGGAATTGGTCTTTTTAAAAAGGATAAATATGTTGGTAAAATTGCGGAAAAAGATATGTTTGTATTCAAAGGA
CTTTTAGAGAAACATAAATTGGACTCACGTGAATTTAAAGCAAATCCTGGGTACGTAATGATTAATAATATTCGTTCTGT
TCCAACATACGATGTAAAAATAAAAAACGGAAAGCCTTCTTTTTCCATTCATGTTAAAGTCGATGCTCGTATTCAAGAAG
TATCGAAACAAATTAACTTAGAGAATGCTAAGAACACAAAAAAGATTGAAAAAACCGTCCAAAAACAATTAGATATACAA
GGTAACAAACTAATTAAGCAGTTTAAATCTTTAGGCGTCGACCCCCTGGGGCTAGGGGCTAAATATAAGCAACACTATCG
CCCATTCAAATTAGAAGAGTGGAAACAAATGTACAAAGATGTTCCAGTTACTATAAAATACACCGTAAACATTACAAATT
CTGGTGTGATTGAATGA

Upstream 100 bases:

>100_bases
TTTTAATCGCTTTTATCATTATCACCCTCATTGTTTCACAACTTTTAACAAACAGACACGATATTAATAATTTTATTAGT
AATGCATCAAAAGGGAGCTT

Downstream 100 bases:

>100_bases
GAAATGATTGAACTCCTCTCTCCAGCATGATACAACGGAAAGAGGAGTTTTTATTTTAGATAGAGAGAGAAGATATTTAT
GGGGGAGCTTATGTCTAAAA

Product: spore germination protein

Products: NA

Alternate protein names: Germination Protein Ger(X)C Family; Spore Germination B3 GerAC Family Protein; Spore Germination Protein KC; Spore Germination Protein GerHC; Spore Germination Protein GerKC; GerC Family Spore Germination Protein; Spore Germination Protein QC; Spore Germination Protein GerA; GerKC1 Protein; Spore Germination Protein GerC Family; Spore Germination Protein GerAC; Spore Germination Protein C

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MAHLCIHPNPIYHCVGEKKMEKIKNKLIAISCIALFSLTGCLQKNIIDDVHLIQGTVFDVAKDNQIKVTFVCPIQQKGNK
VQVFEGTANAVKQVKADTSLESSQPFASGQMRVALFTTRIAKKGMVASFDTLIRDVNIGNALYVALLEGNGTELLKGKYT
TSSNVAIYIKKMLEHNMETGPLPKDNLHIGAFRYYQEGHDYYIPILKKHGDKIKITGIGLFKKDKYVGKIAEKDMFVFKG
LLEKHKLDSREFKANPGYVMINNIRSVPTYDVKIKNGKPSFSIHVKVDARIQEVSKQINLENAKNTKKIEKTVQKQLDIQ
GNKLIKQFKSLGVDPLGLGAKYKQHYRPFKLEEWKQMYKDVPVTIKYTVNITNSGVIE

Sequences:

>Translated_378_residues
MAHLCIHPNPIYHCVGEKKMEKIKNKLIAISCIALFSLTGCLQKNIIDDVHLIQGTVFDVAKDNQIKVTFVCPIQQKGNK
VQVFEGTANAVKQVKADTSLESSQPFASGQMRVALFTTRIAKKGMVASFDTLIRDVNIGNALYVALLEGNGTELLKGKYT
TSSNVAIYIKKMLEHNMETGPLPKDNLHIGAFRYYQEGHDYYIPILKKHGDKIKITGIGLFKKDKYVGKIAEKDMFVFKG
LLEKHKLDSREFKANPGYVMINNIRSVPTYDVKIKNGKPSFSIHVKVDARIQEVSKQINLENAKNTKKIEKTVQKQLDIQ
GNKLIKQFKSLGVDPLGLGAKYKQHYRPFKLEEWKQMYKDVPVTIKYTVNITNSGVIE
>Mature_377_residues
AHLCIHPNPIYHCVGEKKMEKIKNKLIAISCIALFSLTGCLQKNIIDDVHLIQGTVFDVAKDNQIKVTFVCPIQQKGNKV
QVFEGTANAVKQVKADTSLESSQPFASGQMRVALFTTRIAKKGMVASFDTLIRDVNIGNALYVALLEGNGTELLKGKYTT
SSNVAIYIKKMLEHNMETGPLPKDNLHIGAFRYYQEGHDYYIPILKKHGDKIKITGIGLFKKDKYVGKIAEKDMFVFKGL
LEKHKLDSREFKANPGYVMINNIRSVPTYDVKIKNGKPSFSIHVKVDARIQEVSKQINLENAKNTKKIEKTVQKQLDIQG
NKLIKQFKSLGVDPLGLGAKYKQHYRPFKLEEWKQMYKDVPVTIKYTVNITNSGVIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42663; Mature: 42531

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLCIHPNPIYHCVGEKKMEKIKNKLIAISCIALFSLTGCLQKNIIDDVHLIQGTVFDV
CCEEEECCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
AKDNQIKVTFVCPIQQKGNKVQVFEGTANAVKQVKADTSLESSQPFASGQMRVALFTTRI
CCCCEEEEEEEEECCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHH
AKKGMVASFDTLIRDVNIGNALYVALLEGNGTELLKGKYTTSSNVAIYIKKMLEHNMETG
HHCCCHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHEEHHHHCCCCCC
PLPKDNLHIGAFRYYQEGHDYYIPILKKHGDKIKITGIGLFKKDKYVGKIAEKDMFVFKG
CCCCCCEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHH
LLEKHKLDSREFKANPGYVMINNIRSVPTYDVKIKNGKPSFSIHVKVDARIQEVSKQINL
HHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECHHHHHHHHHCCC
ENAKNTKKIEKTVQKQLDIQGNKLIKQFKSLGVDPLGLGAKYKQHYRPFKLEEWKQMYKD
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHCC
VPVTIKYTVNITNSGVIE
CCEEEEEEEEECCCCCCC
>Mature Secondary Structure 
AHLCIHPNPIYHCVGEKKMEKIKNKLIAISCIALFSLTGCLQKNIIDDVHLIQGTVFDV
CEEEECCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
AKDNQIKVTFVCPIQQKGNKVQVFEGTANAVKQVKADTSLESSQPFASGQMRVALFTTRI
CCCCEEEEEEEEECCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHH
AKKGMVASFDTLIRDVNIGNALYVALLEGNGTELLKGKYTTSSNVAIYIKKMLEHNMETG
HHCCCHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHEEHHHHCCCCCC
PLPKDNLHIGAFRYYQEGHDYYIPILKKHGDKIKITGIGLFKKDKYVGKIAEKDMFVFKG
CCCCCCEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHH
LLEKHKLDSREFKANPGYVMINNIRSVPTYDVKIKNGKPSFSIHVKVDARIQEVSKQINL
HHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECHHHHHHHHHCCC
ENAKNTKKIEKTVQKQLDIQGNKLIKQFKSLGVDPLGLGAKYKQHYRPFKLEEWKQMYKD
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHCC
VPVTIKYTVNITNSGVIE
CCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA