| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is gerHA [H]
Identifier: 118479866
GI number: 118479866
Start: 4525050
End: 4527215
Strand: Direct
Name: gerHA [H]
Synonym: BALH_4307
Alternate gene names: 118479866
Gene position: 4525050-4527215 (Clockwise)
Preceding gene: 118479858
Following gene: 118479867
Centisome position: 86.08
GC content: 36.52
Gene sequence:
>2166_bases ATGATTTGGAATTGGCTACGTAAGAAAAAAAAATCAAATACAACAGAGAAAAACGAAACAGATAATTCGGAGCAAAAACC TAACAATCAAGAGGATGACAACAAAGAACAGACTAGAAGTACGAAACATAATAAAAGTAACAATAGCGAGCAAAAAAAAG AGGAACACAAGGAATCTTCTCAAGATAAGCAGCAAAATCAATCGAATCAAAATCAGCAACAAAGTGCTAAACAAGATGAA TCTTCTCAAGAGCAACAGAATCATTCTAAGCAAGGCGACTCGAATCAAGGGCAACAGAATCATTCTAAGCAGAACGACTC CGATCAGGGTCAACAGCAACACTCTAAGCAAGACGACTCGAATCAAGGGCAACAGAATCATTCTAAGCAAGGCGACTCGA ATCAAGGGCAACAGAATCATTCTAAGCAAGGCGACTCGAATCAAGGGCAACAGAATCATTCTAAGCAGAACGACTCCGAT CAGGGTCAACAGCAACACTCTAAGCAAGATGACTCGAATCAAGGACAACAGAATCATTCTAAGCAGAACGACTCCGATCA GGATGATTCATCCCAGGATAAGCAGCAAAGCTCCAAGCAAGATGATTTAGCACAAGATAAACAGCAACACTCTAAACAAG ACAACTCAGATCAGGATAAACAACAAAATTCTAAAGGTAATAGTATTTATGATTTTTCGAAACCAGAAAAAGAACATATT CATTCTCTACAAGATTTAATAGAGAAGCTCAAACAGTCTAGTGATTTTGTTAATTATCACACATCTGACGATGAAACGAT GCCTTATTGGATTTCTTACTATCGTCCTTCGCTTGATGGCGAGAAATTACAAAAGTATTTAATGCCCACTCTTTTAGAAC GACCTTGTGCTTCACTAGAAGAGCTAAAAGAACATATTCCAATGAGTGGCATTACAATTACGAACGACTTACAAAAAATT GAAGATATGGTTTTAAAGGGGCATGCGATTATTCAGTTGAATCAGAAAGATCAAAAGTGTATGCTCGCAAACATTGCAAT TGATAATTATCGTGCACCAACTCCACCTTTAAATGAATCAACTGTTATCGGTCCACAAGAAGGTTTTGTAGAGGATATTG ATACAAATATTAATTTAGTTCGAAAACGTCTTCCTGTTTTAGATTTACAAACAAAAGAGATGATTATTGGGGAATTTTCA AAAACGAAGGTTGTCATGATGTATTTAGAAAATCTTGCTGAAAAAGAGAATGTAGATTTTCTCGATGAGTCATTACGTGC TCTTGAGTATGATCAAATTAATGATAGTGCATATTTACAAGAGTTAATGGGTGAGAAATCCATTTTCCCACTCTATATTA ATACAGAGCGCACTGACAGAGTTACAAAGGCGCTAATCGATGGAAAAATCGCTATTTTCGTTGATGGTTCTCCAAGCGTT CTACTAACACCTGTATCTTATTTTGACTTTTTCATTTCACCAGAAGACTATAACGTTTCCTGGTTATACGCTACATTTTC AAGGATTTTAAGATTAATCGCCGTTCTATTTTCAATTTGTGCTACACCGTTATACGTTGCAGTTTTAAATTATCATTACG AACTCATTCCAAGTGATTTACTTGAGACTTTGATTTTATCAAGGGCACAAGTACCGTTCCCACCTTTAATTGAGGCACTC TTTTTAGAACTTGCAATCGACTTATTAAGAGAAGCTGGCGCGAGGTTACCGATGAAAGTTGGTCAAACGCTCGGTATTGT AGGTGGTATCGTAATTGGGCAAGCATCTGTACAAGCTGGTTTAACGAGTAATATTTTATTAATTATCGTTGCCTTATCAG CCCTTGCTTCCTTTATTACACCTATTTATAAAATGGGTAACGCTGTTCGGTTACTACGCTTTCCGTTTCTCATATTTGCA GAAATAGGAGGACTTTTCGGGATTTCTCTTGGATTTATCTTTTTATTCACCCATCTATTTAGACTTACTTCCTTACGTAA GCCGTACGCTTTGTTTTATCCAACAAGACAACAATCTGTTAAAGACTCTTGGATTCGTTTTCCCTTAACAATGATTGATA CAAGGGATGTACAAGCAAGACCACAACATGTAAAAAAAGCAGCAAAAGGAATTTCAACAAAACATAGATCAGACTTTGAT GATTAA
Upstream 100 bases:
>100_bases TATGCAAACCAATCTCCTCCTTCTTTTCATAAATAAATGAATAATATACAAAATTAGCCACAAAATAGCACTATATTACA CAATCAAAGAGGGCATACAT
Downstream 100 bases:
>100_bases GGAATGAGGTGCATTGATGAGTAAAGTTCAAGAAAAATATCAAATATCTCCTGTCTTTGTTTTCTTCTTAATTCACGGTG CACAGTTTGGCGCCGGCGTT
Product: spore germination protein GerHA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESSQDKQQNQSNQNQQQSAKQDE SSQEQQNHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDDSNQGQQNHSKQGDSNQGQQNHSKQGDSNQGQQNHSKQNDSD QGQQQHSKQDDSNQGQQNHSKQNDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKGNSIYDFSKPEKEHI HSLQDLIEKLKQSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPCASLEELKEHIPMSGITITNDLQKI EDMVLKGHAIIQLNQKDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIIGEFS KTKVVMMYLENLAEKENVDFLDESLRALEYDQINDSAYLQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSV LLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEAL FLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFA EIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKAAKGISTKHRSDFD D
Sequences:
>Translated_721_residues MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESSQDKQQNQSNQNQQQSAKQDE SSQEQQNHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDDSNQGQQNHSKQGDSNQGQQNHSKQGDSNQGQQNHSKQNDSD QGQQQHSKQDDSNQGQQNHSKQNDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKGNSIYDFSKPEKEHI HSLQDLIEKLKQSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPCASLEELKEHIPMSGITITNDLQKI EDMVLKGHAIIQLNQKDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIIGEFS KTKVVMMYLENLAEKENVDFLDESLRALEYDQINDSAYLQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSV LLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEAL FLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFA EIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKAAKGISTKHRSDFD D >Mature_721_residues MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESSQDKQQNQSNQNQQQSAKQDE SSQEQQNHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDDSNQGQQNHSKQGDSNQGQQNHSKQGDSNQGQQNHSKQNDSD QGQQQHSKQDDSNQGQQNHSKQNDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKGNSIYDFSKPEKEHI HSLQDLIEKLKQSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPCASLEELKEHIPMSGITITNDLQKI EDMVLKGHAIIQLNQKDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIIGEFS KTKVVMMYLENLAEKENVDFLDESLRALEYDQINDSAYLQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSV LLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEAL FLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFA EIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKAAKGISTKHRSDFD D
Specific function: Required for inosine germination [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gerABKA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004995 [H]
Pfam domain/function: PF03323 GerA [H]
EC number: NA
Molecular weight: Translated: 82202; Mature: 82202
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESS CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH QDKQQNQSNQNQQQSAKQDESSQEQQNHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDDS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCC NQGQQNHSKQGDSNQGQQNHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDDSNQGQQNHS CCCHHHHCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCHHHCC KQNDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKGNSIYDFSKPEKEHI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHH HSLQDLIEKLKQSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPCASLE HHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ELKEHIPMSGITITNDLQKIEDMVLKGHAIIQLNQKDQKCMLANIAIDNYRAPTPPLNES HHHHHCCCCCCEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHEEECCCCCCCCCCCCC TVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIIGEFSKTKVVMMYLENLAEKENVDF EEECCCCCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH LDESLRALEYDQINDSAYLQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSV HHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCE LLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDL EEEEHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC LTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLF CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKAAKGISTKHRSDFD HHHHCCCCCEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCHHCCCCCC D C >Mature Secondary Structure MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESS CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH QDKQQNQSNQNQQQSAKQDESSQEQQNHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDDS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCC NQGQQNHSKQGDSNQGQQNHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDDSNQGQQNHS CCCHHHHCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCHHHCC KQNDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKGNSIYDFSKPEKEHI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHH HSLQDLIEKLKQSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPCASLE HHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ELKEHIPMSGITITNDLQKIEDMVLKGHAIIQLNQKDQKCMLANIAIDNYRAPTPPLNES HHHHHCCCCCCEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHEEECCCCCCCCCCCCC TVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIIGEFSKTKVVMMYLENLAEKENVDF EEECCCCCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH LDESLRALEYDQINDSAYLQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSV HHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCE LLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDL EEEEHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC LTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLF CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKAAKGISTKHRSDFD HHHHCCCCCEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCHHCCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9852021 [H]