Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is cse60 [H]
Identifier: 118479849
GI number: 118479849
Start: 4510911
End: 4511093
Strand: Reverse
Name: cse60 [H]
Synonym: BALH_4287
Alternate gene names: 118479849
Gene position: 4511093-4510911 (Counterclockwise)
Preceding gene: 118479851
Following gene: 118479847
Centisome position: 85.81
GC content: 29.51
Gene sequence:
>183_bases ATGATTCGTGTAAAAGTGTTTGATGAAAGTCACGAAAAAGACTTAGAAGACGCTGTAAATGTTTTTTTGAAAAAGATTGA TGATAGTAACTTTGTAGACATTAAGTACCAAGTCGGTGTTTCTATTAACGATGACGAAAATCAAATTTATTGTTTTTCAG CAATGATCGTTTATAAAGCATAA
Upstream 100 bases:
>100_bases GACGGATATATATATGAAGACGGAAAGTTTTATCGCATCATAGATACGCACCGTGGCAATAATCAAGCGGCGGAGGGCTG CGATCTAGGATGGTGTTAAC
Downstream 100 bases:
>100_bases AAAAGAGCTGGATGAGCCAGCTCTTTTTTATGCTTTATGTTGGGACAACATGTGTCGGTAATACGTTCATAATAGATTGG GTTGCGCCTAATTTCTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MIRVKVFDESHEKDLEDAVNVFLKKIDDSNFVDIKYQVGVSINDDENQIYCFSAMIVYKA
Sequences:
>Translated_60_residues MIRVKVFDESHEKDLEDAVNVFLKKIDDSNFVDIKYQVGVSINDDENQIYCFSAMIVYKA >Mature_60_residues MIRVKVFDESHEKDLEDAVNVFLKKIDDSNFVDIKYQVGVSINDDENQIYCFSAMIVYKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020296 - ProDom: PD052690 [H]
Pfam domain/function: PF10957 DUF2758 [H]
EC number: NA
Molecular weight: Translated: 6991; Mature: 6991
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVKVFDESHEKDLEDAVNVFLKKIDDSNFVDIKYQVGVSINDDENQIYCFSAMIVYKA CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEEC >Mature Secondary Structure MIRVKVFDESHEKDLEDAVNVFLKKIDDSNFVDIKYQVGVSINDDENQIYCFSAMIVYKA CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8990290; 9384377 [H]