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The map label for this gene is ytoP [H]

Identifier: 118479833

GI number: 118479833

Start: 4493946

End: 4495037

Strand: Reverse

Name: ytoP [H]

Synonym: BALH_4270

Alternate gene names: 118479833

Gene position: 4495037-4493946 (Counterclockwise)

Preceding gene: 118479835

Following gene: 118479832

Centisome position: 85.5

GC content: 41.3

Gene sequence:

>1092_bases
TTGAAAGAAGGGGACTTCGTGAATAAAGAGACATTACAATTATTTCGTACGTTAACAGAATTACAAGGTGCATCAGGTTT
TGAGCATGATGTACGCCGTTTTATGAAGCAAGAATTAAGCAAATATGCGGATGAAATTGTACAAGACGGTTTAGGTAGCG
TATTTGGTCTGAAAAAAGGGGACGAAACTGGCCCGCGTGTTCTTGTAGCAGGTCATATGGATGAAGTAGGTTTCATGATT
ACGCAAATTACGAAAAACGGAATGCTTCGTTTTCAACCGTTAGGCGGCTGGTGGAGTCAAGTGCTATTAGCGCAACGCGT
ACAAGTGATGACGAAGAATGGTCCTGTTATTGGGGTTGTTGGTTCTATCCCTCCTCATTTATTAAGTGACGCGCAACGTG
CAAAACCGATGGATATAAAAAACATGTTAATTGATATAGGTGCAGATAGCTATGAAGAGGCGATTGAGATTGGTGTAAAA
CCAGGACAACAAATCGTGCCGATCTGCCCGTTTACGCCGATGGCAAACGAAAAGAAAATTATGGCGAAAGCTTGGGACAA
CCGTTACGGATGTGGCCTTGCAATCGAATTATTAAAAGAATTAAAAGACGAAACTTTACCAAATACATTATACTCAGGTG
CGACTGTACAAGAAGAAGTAGGTCTTCGCGGTGCGCAAACTGCTGCAAATATGATCCAACCAGACATTTTCTATGCGCTT
GATGCAAGTCCAGCAAACGATGCATCTGGTGATAAAACACAGTTCGGTCAATTAGGAAAAGGTGCTCTTCTTCGTATTTA
TGACCGTACGATGGTAACACATAGAGGAATGCGCGAATTCATTTTAGATACAGCAGAAACAAACAACATTCCGTACCAAT
ACTTTATTTCACAAGGTGGTACAGATGCGGGCCGTGTACATACAAGTAACTCAGGTATCCCATCAGCAGTAATTGGTGTT
TGCGCACGTTACATTCATACACATGCTTCTATTTTACATGTTGATGATTATGCGGCAGCAAAAGAGCTAATTACGAAGCT
TGTAAGAGCAACGGATAAAACGACGTTAGAAACAATTAAGAATAACGCGTAG

Upstream 100 bases:

>100_bases
AGTGTACCGATAATAATTATAAAGCAAATACAGCTAAAAAAGAAGAAACTAGAAACATTTCGAAAATTTCGTTACAATAA
AAGAGGTATTCTACTAAGGT

Downstream 100 bases:

>100_bases
AGAGAAGGGCTGAAGAGCCTTTCTTTTTTTGGCTTGAATAGATGACCCATCCATGTGTGGGAGCGGTCAGTGCCTAATTG
ATTCGCGCGCGAGGTATTAA

Product: M42 family deblocking aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKEGDFVNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMI
TQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEEAIEIGVK
PGQQIVPICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYAL
DASPANDASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGGTDAGRVHTSNSGIPSAVIGV
CARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIKNNA

Sequences:

>Translated_363_residues
MKEGDFVNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMI
TQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEEAIEIGVK
PGQQIVPICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYAL
DASPANDASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGGTDAGRVHTSNSGIPSAVIGV
CARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIKNNA
>Mature_363_residues
MKEGDFVNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMI
TQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEEAIEIGVK
PGQQIVPICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYAL
DASPANDASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGGTDAGRVHTSNSGIPSAVIGV
CARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIKNNA

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=357, Percent_Identity=38.9355742296919, Blast_Score=234, Evalue=6e-63,
Organism=Escherichia coli, GI1788727, Length=347, Percent_Identity=32.2766570605187, Blast_Score=194, Evalue=9e-51,
Organism=Escherichia coli, GI87082417, Length=356, Percent_Identity=29.7752808988764, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 39845; Mature: 39845

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGDFVNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKG
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
DETGPRVLVAGHMDEVGFMITQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVV
CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEE
GSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEEAIEIGVKPGQQIVPICPFTPMANEKKI
CCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCHH
MAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYAL
HHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCHHHHHHHHCCCCEEEEE
DASPANDASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGG
CCCCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
TDAGRVHTSNSGIPSAVIGVCARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIK
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCHHHHHHHH
NNA
CCC
>Mature Secondary Structure
MKEGDFVNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKG
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
DETGPRVLVAGHMDEVGFMITQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVV
CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEE
GSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEEAIEIGVKPGQQIVPICPFTPMANEKKI
CCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCHH
MAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYAL
HHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCHHHHHHHHCCCCEEEEE
DASPANDASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGG
CCCCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
TDAGRVHTSNSGIPSAVIGVCARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIK
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCHHHHHHHH
NNA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]