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The map label for this gene is emrA [H]

Identifier: 118479717

GI number: 118479717

Start: 4373721

End: 4374398

Strand: Reverse

Name: emrA [H]

Synonym: BALH_4153

Alternate gene names: 118479717

Gene position: 4374398-4373721 (Counterclockwise)

Preceding gene: 118479719

Following gene: 118479716

Centisome position: 83.21

GC content: 37.61

Gene sequence:

>678_bases
ATGCGATATAAGGAGAGGAATGCAATGAATCAGTTTCGAAGAATGGTGATTATCAACATTATCACATTAATTGTACTAGT
TGGCGGCGGTATTGGCGGTTATTACTATTACAATCAAGCGGAAAATTATTTAAAAACAGACAATGCAAAAATTGATGGAA
AGGTAATTCCGATTGCATCACCAGTAGCAGGTAAATTAACTGACTGGAAAGCTGAAGTAGGTAAGGACTACAACGAGAAT
GATAAATTAGGTGCTGTCACTGTAGCAGCAGCGAATGGAGAACAAACAGTAGATGTAACAATTCCACAAAATGCAACAGT
TGTACAATCAAACGCGACAACAAATGCTTTCGTTGGAGCAGGTAGCCCGATCGCTTATGCATTTGATATGAACAATTTAT
GGGTAACAGCAAACATTGAAGAAACAGATGTTGACGATGTACAAAAAGGTCAAGACGTAGATGTGTATGTAGATGCATAC
CCAGATACAACGTTATCAGGAAAAGTAGAGCAAGTGGGCTTAACAACAGCGAACACATTCTCTATGTTACCATCAAGCAA
CGCAACAGCGAACTATACGAAAGTAACACAAGTAGTACCAGTTAAAATTTCTTTAGATCATAGCAAATCAGTAAATATTG
TTCCTGGCATGAATGTGACAGTTCGTATTCATAAGTAA

Upstream 100 bases:

>100_bases
TTACACCGCAGATGGTGTGATTTTTTTGTTTAAAAGTTAATATAATTAACAATTAAATAGTCTAAACAATAAGGACGTAA
ATAGTTTAGAAAAAAATTAT

Downstream 100 bases:

>100_bases
GGGGGAGATGAGATGTCCTCAATCGTAATTGCAGGATATGCACTATTTTGTATAATCGTCTTCTTCCTTGTAAATCGTCT
TTTACGAAAGAAAAAAACGA

Product: multidrug resistance protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRYKERNAMNQFRRMVIINIITLIVLVGGGIGGYYYYNQAENYLKTDNAKIDGKVIPIASPVAGKLTDWKAEVGKDYNEN
DKLGAVTVAAANGEQTVDVTIPQNATVVQSNATTNAFVGAGSPIAYAFDMNNLWVTANIEETDVDDVQKGQDVDVYVDAY
PDTTLSGKVEQVGLTTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK

Sequences:

>Translated_225_residues
MRYKERNAMNQFRRMVIINIITLIVLVGGGIGGYYYYNQAENYLKTDNAKIDGKVIPIASPVAGKLTDWKAEVGKDYNEN
DKLGAVTVAAANGEQTVDVTIPQNATVVQSNATTNAFVGAGSPIAYAFDMNNLWVTANIEETDVDDVQKGQDVDVYVDAY
PDTTLSGKVEQVGLTTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK
>Mature_225_residues
MRYKERNAMNQFRRMVIINIITLIVLVGGGIGGYYYYNQAENYLKTDNAKIDGKVIPIASPVAGKLTDWKAEVGKDYNEN
DKLGAVTVAAANGEQTVDVTIPQNATVVQSNATTNAFVGAGSPIAYAFDMNNLWVTANIEETDVDDVQKGQDVDVYVDAY
PDTTLSGKVEQVGLTTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788711, Length=110, Percent_Identity=34.5454545454545, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789041, Length=95, Percent_Identity=36.8421052631579, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000089
- InterPro:   IPR006143
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 24385; Mature: 24385

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYKERNAMNQFRRMVIINIITLIVLVGGGIGGYYYYNQAENYLKTDNAKIDGKVIPIAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCEECCEEEEECC
PVAGKLTDWKAEVGKDYNENDKLGAVTVAAANGEQTVDVTIPQNATVVQSNATTNAFVGA
CCCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEECCCCCEEEEEC
GSPIAYAFDMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTTLSGKVEQVGLTTANTF
CCCEEEEEECCCEEEEEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCEEEEECEECCEE
SMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK
EECCCCCCCCCEEEEEEEEEEEEEECCCCCEEEECCCEEEEEEEC
>Mature Secondary Structure
MRYKERNAMNQFRRMVIINIITLIVLVGGGIGGYYYYNQAENYLKTDNAKIDGKVIPIAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCEECCEEEEECC
PVAGKLTDWKAEVGKDYNENDKLGAVTVAAANGEQTVDVTIPQNATVVQSNATTNAFVGA
CCCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEECCCCCEEEEEC
GSPIAYAFDMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTTLSGKVEQVGLTTANTF
CCCEEEEEECCCEEEEEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCEEEEECEECCEE
SMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK
EECCCCCCCCCEEEEEEEEEEEEEECCCCCEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]